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Tan0003828 (gene) of Snake gourd v1 genome

Gene IDTan0003828
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein SRC1-like
Genome locationLG10:37227370..37228446
RNA-Seq ExpressionTan0003828
SyntenyTan0003828
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR039285 - Dehydrin HIRD11-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596975.1 Protein SRC1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2474.77Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDHHDEKGE-KKKKEKKKKGDGEHHHHEGGHSS
        M+G +EKIGEKLHIGGDHKG EHKGEHHE  K EH  EH+ +HG KSE     HKEGL++KIKDKIHGDHHD+KGE KKKKEKKKKG+    HHEGGHSS
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDHHDEKGE-KKKKEKKKKGDGEHHHHEGGHSS

Query:  SSDSDSD
        SSDSDSD
Subjt:  SSDSDSD

KAG7028450.1 Protein SRC1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-2371.96Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDHHDEKGE-KKKKEKKKKGDGEHHHHEGGHSS
        M+G +EKIGEKLHIGGD     HKGEHHE  K EH  EH+ +HG KSE     HKEGL++KIKDKIHGDHHDEKGE KKKKEKKKKG+    HHEGGHSS
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDHHDEKGE-KKKKEKKKKGDGEHHHHEGGHSS

Query:  SSDSDSD
        SSDSDSD
Subjt:  SSDSDSD

XP_022942109.1 protein SRC1-like [Cucurbita moschata]1.6e-2475.96Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH--KGEHGGKSEHKEGLIDKIKDKIHGDHHDEKGE-KKKKEKKKKGDGEHHHHEGGHSSSSD
        M+G +EKIGEKLHIGGDHKG EHKGEHHE  K EH ++H  K EH G+  HKEGL++KIKDKIHGDHHDEKGE KKKKEKKKKG+    HHEGGHSSSSD
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH--KGEHGGKSEHKEGLIDKIKDKIHGDHHDEKGE-KKKKEKKKKGDGEHHHHEGGHSSSSD

Query:  SDSD
        SDSD
Subjt:  SDSD

XP_023538905.1 protein SRC1-like [Cucurbita pepo subsp. pepo]1.8e-2373.87Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHE---EHKGEHGGKSE-----HKEGLIDKIKDKIH-GDHHDEKGE-KKKKEKKKKGDGEHHHHEG
        MSG +EKIGEKLHIGGDHKG EHKGEHHE  K EH +   EH+ +HG KSE     HKEGL++KIKDKIH GDHHDEKGE KKKKEKKKKG+    HHEG
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHE---EHKGEHGGKSE-----HKEGLIDKIKDKIH-GDHHDEKGE-KKKKEKKKKGDGEHHHHEG

Query:  GHSSSSDSDSD
        GHSSSSDSDSD
Subjt:  GHSSSSDSDSD

XP_038903205.1 protein SRC1 [Benincasa hispida]7.3e-2576.64Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDHHDEKGEKKKKEKK-KKGDGEHHHHEGGHSS
        MSGFIEKIGEKLHIGGDH    +KGEHH+ HKGEHH+EHK +HG   E     HKEGLI+KIKDKIHGD HDEKGEKKKKEKK KK  GEHHHH+GGH S
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSE-----HKEGLIDKIKDKIHGDHHDEKGEKKKKEKK-KKGDGEHHHHEGGHSS

Query:  SSDSDSD
        SSDSDSD
Subjt:  SSDSDSD

TrEMBL top hitse value%identityAlignment
A0A1S3B8E4 protein SRC13.3e-2371.7Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHG--DHHDEKGEKKKKEKKKKGDGEHHHHEGGHS
        MSGFIEKIGEKLHIGGD     HKGEHH+AHKGEHH+EH     K EH G+  HKEG+I+KIKDKIHG   HHDEKGEKKKKEKKKKG+  H HH G  S
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHG--DHHDEKGEKKKKEKKKKGDGEHHHHEGGHS

Query:  SSSDSD
        S SDSD
Subjt:  SSSDSD

A0A5A7UF86 Zinc transporter ZIP63.3e-2371.7Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHG--DHHDEKGEKKKKEKKKKGDGEHHHHEGGHS
        MSGFIEKIGEKLHIGGD     HKGEHH+AHKGEHH+EH     K EH G+  HKEG+I+KIKDKIHG   HHDEKGEKKKKEKKKKG+  H HH G  S
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH-----KGEHGGKSEHKEGLIDKIKDKIHG--DHHDEKGEKKKKEKKKKGDGEHHHHEGGHS

Query:  SSSDSD
        S SDSD
Subjt:  SSSDSD

A0A6J1FQD3 protein SRC1-like7.9e-2575.96Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH--KGEHGGKSEHKEGLIDKIKDKIHGDHHDEKGE-KKKKEKKKKGDGEHHHHEGGHSSSSD
        M+G +EKIGEKLHIGGDHKG EHKGEHHE  K EH ++H  K EH G+  HKEGL++KIKDKIHGDHHDEKGE KKKKEKKKKG+    HHEGGHSSSSD
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH--KGEHGGKSEHKEGLIDKIKDKIHGDHHDEKGE-KKKKEKKKKGDGEHHHHEGGHSSSSD

Query:  SDSD
        SDSD
Subjt:  SDSD

A0A6J1I7B7 protein SRC1-like9.6e-2373.33Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH--KGEHGGKSEHKEGLIDKIKDKIH--GDHHDEKGEKKKKEKKKKGDGEHHHHEGGHSSSS
        MSG +EKIGEKLHIGGDHKG EHKG+HHE  K EH ++H  K EH G+  HKEGL++KIKDKIH  GDHHDEKGEKKKK+K+KK  GE  H EGGHSSSS
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH--KGEHGGKSEHKEGLIDKIKDKIH--GDHHDEKGEKKKKEKKKKGDGEHHHHEGGHSSSS

Query:  DSDSD
        DSDSD
Subjt:  DSDSD

A0A6J1IAZ2 protein SRC1-like4.3e-2374.29Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH--KGEHGGKSEHKEGLIDKIKDKIH--GDHHDEKGEKKKKEKKKKGDGEHHHHEGGHSSSS
        MSG +EKIGEKLHIGGDHKG EHKGEHHE  K EH ++H  K EH G+  HKEGL++KIKDKIH  GDHHDEKGEKKKK+K+KK  GE  H EGGHSSSS
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEH--KGEHGGKSEHKEGLIDKIKDKIH--GDHHDEKGEKKKKEKKKKGDGEHHHHEGGHSSSS

Query:  DSDSD
        DSDSD
Subjt:  DSDSD

SwissProt top hitse value%identityAlignment
O04132 Protein SRC11.6e-2269.81Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHH----EAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDHHDEKGEKKKKEKKKKGDGEHHHHEGGHS
        MSG I KI E LH+GG HK EEHKGEHH      HKGEHH EHKGEH G+    EHKEGL+DKIKDKIHGD HD KGEKKKK+ KKK +  H HH  GHS
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHH----EAHKGEHHEEHKGEHGGK---SEHKEGLIDKIKDKIHGDHHDEKGEKKKKEKKKKGDGEHHHHEGGHS

Query:  SSSDSD
        SSSDSD
Subjt:  SSSDSD

Q9SLJ2 Dehydrin HIRD114.3e-1255.66Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIHGDH---HDEKGEKKKKEKKKKGDGEH--HHHEGGHSSS
        M+G I KIG+ LHIGG +K  EHK E  E HK +H +EHK       EHKEG++DKIKDKIHG     HD +G+    EKKKK D +   HH +G HSSS
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIHGDH---HDEKGEKKKKEKKKKGDGEH--HHHEGGHSSS

Query:  SDSDSD
        SDSDSD
Subjt:  SDSDSD

Arabidopsis top hitse value%identityAlignment
AT1G54410.1 dehydrin family protein3.1e-1355.66Show/hide
Query:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIHGDH---HDEKGEKKKKEKKKKGDGEH--HHHEGGHSSS
        M+G I KIG+ LHIGG +K  EHK E  E HK +H +EHK       EHKEG++DKIKDKIHG     HD +G+    EKKKK D +   HH +G HSSS
Subjt:  MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIHGDH---HDEKGEKKKKEKKKKGDGEH--HHHEGGHSSS

Query:  SDSDSD
        SDSDSD
Subjt:  SDSDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGATTCATCGAGAAAATTGGAGAGAAGCTCCACATAGGAGGAGACCACAAAGGCGAGGAGCACAAGGGCGAGCATCACGAGGCGCACAAAGGCGAGCACCATGA
GGAGCACAAGGGCGAGCACGGCGGCAAGTCGGAGCATAAGGAAGGGCTGATCGACAAGATCAAAGACAAGATCCATGGAGATCATCATGATGAGAAAGGTGAAAAGAAGA
AGAAGGAGAAGAAGAAGAAGGGCGATGGCGAGCACCACCACCACGAAGGCGGCCATAGCAGCAGCAGCGACAGCGACAGCGACTGA
mRNA sequenceShow/hide mRNA sequence
GTTGGAAGGTACATTGTCAGAGCGCGTGACGCGGTATTGCCGCGTAAAGGGATAAAGAAAAAGGAAAAAAGAAACGCAATTATTAAAGTGATAAAAAACGTCAAAATCAC
GGATAACTGTGGATATATTGATATAAAATAATACAAACTATATTATTTTTCCTCCTATAAATTAGCTTCCTCCTTCCCAACCAAACAGCCTCATTCCGCAAACTTAGATC
CAAACAAACACCGTAAGTAAGCATCACCATCATGTCAGGATTCATCGAGAAAATTGGAGAGAAGCTCCACATAGGAGGAGACCACAAAGGCGAGGAGCACAAGGGCGAGC
ATCACGAGGCGCACAAAGGCGAGCACCATGAGGAGCACAAGGGCGAGCACGGCGGCAAGTCGGAGCATAAGGAAGGGCTGATCGACAAGATCAAAGACAAGATCCATGGA
GATCATCATGATGAGAAAGGTGAAAAGAAGAAGAAGGAGAAGAAGAAGAAGGGCGATGGCGAGCACCACCACCACGAAGGCGGCCATAGCAGCAGCAGCGACAGCGACAG
CGACTGATCTATCATTCCGATCGTAATTTGGCCGTTTCTCTCTGTGTGTGTCTTTAATAAACTGCTTCTTATCTCTCTGTTTCTCTTTATATCAGCCTCTGTTTTTCGGC
TTCTTGTTCACTCGTTTTTAATGTAAAATCCAGTGTGATGTATAATAAAAGGTTGTAATGTTAGCCATTTATCTCCATCTGATCTGATCTGATCTGATCTGATCTGATCT
TTAATTTATGAGAGGGGGATAGTTATAGGTTGAGCAATAAAAAACAATTTATGAAGGAAAAAAGTACCAAAAAGAAACTTCCTCAGTCCTCTTCTAAATCTGAGGAAAAG
AAAATGATCAATTTCAACTGTAGGCTGAACAAGTATGTCAATTTTTACCACAAATTTTCAAGTGATCTAATTGGACTTATACTTGAATAAATTTTACAATCCCATGAATG
TTGCCATTTTTTTAAAGCACAAATTTTCTACCTCCGGGGAGGTAAATTTAGAGTTAGTAAGGGCCTGTTTGGTATGCAATCCGAAAA
Protein sequenceShow/hide protein sequence
MSGFIEKIGEKLHIGGDHKGEEHKGEHHEAHKGEHHEEHKGEHGGKSEHKEGLIDKIKDKIHGDHHDEKGEKKKKEKKKKGDGEHHHHEGGHSSSSDSDSD