CuGenDBv2

Gene ID	Tan0003861
Organism	Trichosanthes anguina (Snake gourd v1)
Description	30S ribosomal protein S14, chloroplastic
Genome location	LG04:5180743..5181030
RNA-Seq Expression	Tan0003861
Synteny	Tan0003861
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001209 - Ribosomal protein S14

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QZL38591.1 ribosomal protein S14 [Citrullus naudinianus]

7.3e-35

89.89

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSL++KWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

YP_009317384.1 ribosomal protein S14 [Coccinia grandis]

3.3e-35

91.01

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSLS+KWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

YP_009752241.1 ribosomal protein S14 [Trichosanthes baviensis]

5.1e-36

92.13

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSLS+KWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDFELSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

YP_009752918.1 ribosomal protein S14 [Momordica sessilifolia]

5.6e-35

91.01

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSLS KWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

YP_009753872.1 ribosomal protein S14 [Trichosanthes lobata]

1.1e-35

92.13

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSLSKKWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE66 Ribosomal protein S14

1.6e-35

91.01

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSLS+KWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

A0A6H0EQS6 30S ribosomal protein S14, chloroplastic

2.4e-36

92.13

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSLS+KWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDFELSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

A0A6H0ESP9 30S ribosomal protein S14, chloroplastic

1.6e-35

91.01

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSLS+KWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

A0A6H0ETM3 30S ribosomal protein S14, chloroplastic

2.4e-36

92.13

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSLS+KWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDFELSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

A0A6H0EUX0 30S ribosomal protein S14, chloroplastic

5.5e-36

92.13

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIRRSLKKEISK+PSLSKKWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

SwissProt top hits

e value

%identity

Alignment

A6MM34 30S ribosomal protein S14, chloroplastic

6.2e-37

89.89

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK KKLEQKYHLIRRS KKEISK+PSLS KWE HGKLQSPPRNSAPTRLHRR F TGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

B1NWE8 30S ribosomal protein S14, chloroplastic

4.0e-36

87.64

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHL+RRS KKEISK+PSLS KWE HGKLQSPPRNSAPTRLHRR F TGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

Q33C38 30S ribosomal protein S14, chloroplastic

9.0e-36

87.64

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYH IRRS KKEISK+PSLS KWE +GKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

Q3C1I0 30S ribosomal protein S14, chloroplastic

9.0e-36

87.64

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYH IRRS KKEISK+PSLS KWE +GKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

Q4VZN5 30S ribosomal protein S14, chloroplastic

4.8e-37

88.76

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MARKSLIQREKK +KLEQKYHLIR+SLK EISK+PSLS+KWE HGKLQSPPRNSAPTRLHRR FLTGR RANYRDF LSGHILREMVHA
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

Arabidopsis top hits

e value

%identity

Alignment

ATCG00330.1 chloroplast ribosomal protein S14

4.6e-35

84.27

Show/hide

Query:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA
        MA+KSLI REKK +KLE+KYHLIRRS KKEISKIPSLS+KW+ HGKLQSPPRNSAPTRLHRR F TGR RANYRDF LSGHILREMV A
Subjt:  MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGTAAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAAAAAGAAATAAGCAAAATTCCATCGTT
GAGTAAGAAATGGGAATTTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTATTTTTTAACCGGAAGACTGAGAGCTAACTATC
GAGACTTTGAGCTATCTGGACACATACTTCGTGAAATGGTTCATGCACAAGTACCAAATAGTAATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MARKSLIQREKKSKKLEQKYHLIRRSLKKEISKIPSLSKKWEFHGKLQSPPRNSAPTRLHRRYFLTGRLRANYRDFELSGHILREMVHAQVPNSN

Tan0003861 (gene) of Snake gourd v1 genome