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Tan0003876 (gene) of Snake gourd v1 genome

Gene IDTan0003876
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiondefensin-like protein 1
Genome locationLG01:109704807..109705549
RNA-Seq ExpressionTan0003876
SyntenyTan0003876
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150110.1 defensin-like protein 1 [Cucumis sativus]1.6e-3891.67Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK VGNSAKM+VALLFLLA MLSMNEK GVVEAKVCE+RSKTWSGWCGNT HCDRQCKNWEGA HGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

XP_008454663.1 PREDICTED: defensin-like protein 1 [Cucumis melo]1.8e-3789.29Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK VGNSAKM+VA LFLLA  LSMNEK GVVEAKVCE+RSKTWSGWCG+T HCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

XP_022976615.1 defensin-like protein 1 [Cucurbita maxima]1.6e-3891.67Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKA+ NSAKM VA LFL A MLSMNEKLGVVEAKVCE+RSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

XP_023535147.1 defensin-like protein 1 [Cucurbita pepo subsp. pepo]1.8e-3789.29Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKA+ NSAKM VA +FL A MLS NEKLGVVEAKVCE+RSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

XP_038900009.1 defensin-like protein 1 [Benincasa hispida]6.2e-3890.48Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK VGN A+M+VALLFLLA MLSMNEK G+VEAKVCEKRSKTWSGWCG+TSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

TrEMBL top hitse value%identityAlignment
A0A0A0LFX9 Knot1 domain-containing protein7.9e-3991.67Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK VGNSAKM+VALLFLLA MLSMNEK GVVEAKVCE+RSKTWSGWCGNT HCDRQCKNWEGA HGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

A0A1S3BZX7 defensin-like protein 18.8e-3889.29Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK VGNSAKM+VA LFLLA  LSMNEK GVVEAKVCE+RSKTWSGWCG+T HCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

A0A5A7T656 Defensin-like protein 18.8e-3889.29Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK VGNSAKM+VA LFLLA  LSMNEK GVVEAKVCE+RSKTWSGWCG+T HCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

A0A6J1FBE9 defensin-like protein 14.4e-3788.1Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKA+ +SAKM VA LFL A MLSMN +LGVVEAKVCE+RSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

A0A6J1IJY9 defensin-like protein 17.9e-3991.67Show/hide
Query:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKA+ NSAKM VA LFL A MLSMNEKLGVVEAKVCE+RSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

SwissProt top hitse value%identityAlignment
O24332 Defensin-like protein 38.5e-1450.68Show/hide
Query:  LVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        +VALLF    + +  E   VVEAK+CE+ S TWSG CGN + C  QC   EGA+HG+C+  FP   C CYF C
Subjt:  LVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

P0C8Y4 Defensin-like protein 13.7e-1770Show/hide
Query:  KVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        ++CEK SKTWSG CGNT HCD QCK+WEGA HGACH +     CFCYFNC
Subjt:  KVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

P22357 Anther-specific protein SF18 (Fragment)1.7e-1450Show/hide
Query:  LAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        L F++++++ +  V  K+CEK SKTW G C +T  CD++C +WEGAKHGACH +     CFCYF+C
Subjt:  LAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

P82787 Defensin-like protein 191.9e-2159.74Show/hide
Query:  SAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        S+  L+  L L  F+++  E +  VE ++CE+RSKTW+G+CGNT  CD QCK WE A HGACHAQFPG ACFCYFNC
Subjt:  SAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

Q7M1F2 Defensin-like protein 11.7e-1465.31Show/hide
Query:  VCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        +CE+ S TW+G CGNT HCD QC+NWE AKHGACH +   + CFCYFNC
Subjt:  VCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

Arabidopsis top hitse value%identityAlignment
AT1G19610.1 Arabidopsis defensin-like protein1.3e-2259.74Show/hide
Query:  SAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        S+  L+  L L  F+++  E +  VE ++CE+RSKTW+G+CGNT  CD QCK WE A HGACHAQFPG ACFCYFNC
Subjt:  SAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

AT1G75830.1 low-molecular-weight cysteine-rich 671.3e-1240Show/hide
Query:  VGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        +  SA ++      L F  ++   + V   K+CE+ S TWSG CGN++ C  QC N E A+HG+C+  FP   C CYF C
Subjt:  VGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

AT2G26010.1 plant defensin 1.38.7e-1443.75Show/hide
Query:  VGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        +  SA ++  L   L    +    + V   K+CEK S TWSG CGN++ C  QC N EGAKHG+C+  FP   C CYF C
Subjt:  VGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

AT5G44420.1 plant defensin 1.24.3e-1345.95Show/hide
Query:  LVALLFLLAFMLSMNEKLGVVEA-KVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        ++ L+F    + +  +   +VEA K+CEK S TWSG CGN++ C  QC N EGAKHG+C+  FP   C CY  C
Subjt:  LVALLFLLAFMLSMNEKLGVVEA-KVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

AT5G44430.1 plant defensin 1.2C5.7e-1347.3Show/hide
Query:  LVALLFLLAFMLSMNEKLGVVEA-KVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        ++  LF    + +  E   +VEA K+CEK S TWSG CGN++ C  QC N EGAKHG+C+  FP   C CY  C
Subjt:  LVALLFLLAFMLSMNEKLGVVEA-KVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGGCTGTGGGTAACTCTGCCAAGATGCTCGTTGCTCTGCTCTTCCTTTTGGCCTTCATGCTTTCCATGAATGAAAAGCTAGGGGTGGTGGAAGCAAAGGTGTG
CGAGAAGCGGAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCCATTGCGATAGGCAATGCAAGAATTGGGAGGGTGCCAAACATGGAGCTTGCCATGCCCAATTTC
CAGGAAGGGCTTGTTTTTGCTACTTCAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCATTAAGAATTAAAACAAAAGAAATATGGCCAAGGCTGTGGGTAACTCTGCCAAGATGCTCGTTGCTCTGCTCTTCCTTTTGGCCTTCATGCTTTCCATGAATGAA
AAGCTAGGGGTGGTGGAAGCAAAGGTGTGCGAGAAGCGGAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCCATTGCGATAGGCAATGCAAGAATTGGGAGGGTGC
CAAACATGGAGCTTGCCATGCCCAATTTCCAGGAAGGGCTTGTTTTTGCTACTTCAATTGTTGAAAACCATGGCATCATCCCCCTTGATAAAATCTATCATCTACTCATT
TTCTTCAAAACTTTGTGTTTTACTTCTGAACTATTGTGTGTGTGAGCTGTGAAATGTCCTATATATGTGTCTCGTTATTATCTTTGGCAGCTTGTTTGTGTGCTTCTACT
TTTTCATCTGAAATTTGAATAAAATGACGTTAACTAGTTTTTCTCTC
Protein sequenceShow/hide protein sequence
MAKAVGNSAKMLVALLFLLAFMLSMNEKLGVVEAKVCEKRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC