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Tan0003879 (gene) of Snake gourd v1 genome

Gene IDTan0003879
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG10:41686958..41717304
RNA-Seq ExpressionTan0003879
SyntenyTan0003879
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158199.1 uncharacterized protein LOC111024737 [Momordica charantia]6.8e-0937.5Show/hide
Query:  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVDSWKVKSDYLVIKHDMNQGPPIVMP
        D+NQG  IVMP+GPITRSR+KK  Q      Q +     E + D   +   L GDG++   +    +                    + D+NQG  IVMP
Subjt:  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVDSWKVKSDYLVIKHDMNQGPPIVMP

Query:  ECPITRSRAKKLQQALITHIQAMVSSKE
        + PITRSR+KKLQQAL++++Q +    E
Subjt:  ECPITRSRAKKLQQALITHIQAMVSSKE
XP_038900633.1 uncharacterized protein LOC120087799 [Benincasa hispida]2.3e-1266.67Show/hide
Query:  DMNQGPPIVMPECPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCKVELQDGDALNAF
        D N+G  I+M +  I RSRAKKL QALITHIQAMV+S ++++EDV V  YMLCKVE QD DALNAF
Subjt:  DMNQGPPIVMPECPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCKVELQDGDALNAF
TrEMBL top hitse value%identityAlignment
A0A2N9HSZ8 Uncharacterized protein2.9e-0533.09Show/hide
Query:  DDMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMV------SSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVDSWKVKSDYLVIK
        +D NQG      P+ +P+GPITRSRAKK+++A+   +Q  +       SK   L   G  P+ +  +  N+N +       + +P  DSW   + +    
Subjt:  DDMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMV------SSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVDSWKVKSDYLVIK

Query:  HDMNQG-----PPIVMPECPITRSRAKKLQQALITHIQA
        +D NQG      P+ +P+ PITRSRAKK+++A+   +Q+
Subjt:  HDMNQG-----PPIVMPECPITRSRAKKLQQALITHIQA
A0A6J1DYP6 uncharacterized protein LOC1110247373.3e-0937.5Show/hide
Query:  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVDSWKVKSDYLVIKHDMNQGPPIVMP
        D+NQG  IVMP+GPITRSR+KK  Q      Q +     E + D   +   L GDG++   +    +                    + D+NQG  IVMP
Subjt:  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVDSWKVKSDYLVIKHDMNQGPPIVMP

Query:  ECPITRSRAKKLQQALITHIQAMVSSKE
        + PITRSR+KKLQQAL++++Q +    E
Subjt:  ECPITRSRAKKLQQALITHIQAMVSSKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTACACTTCAACCATGAGCTTGTTTCTTTGCATTTCTTGTGTTTAGATTTGCATGCTAGGATCATTCAAGTAGCGTTGATCAAACTACTTGTGGATGATTCGAA
TCACGAGTTTAGAAACGAGTTTTCTTTACTCTTGATCTTGATCATCAAGGATGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAG
CCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGTGGAGATGGA
TTCAATGAAAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGACTCATGGAAAGTAAAATCGGATTACCTTGTGATCAAGCATGATATGAACCA
AGGACCACCTATTGTCATGCCTGAATGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGG
TTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTACACTTCAACCATGAGCTTGTTTCTTTGCATTTCTTGTGTTTAGATTTGCATGCTAGGATCATTCAAGTAGCGTTGATCAAACTACTTGTGGATGATTCGAA
TCACGAGTTTAGAAACGAGTTTTCTTTACTCTTGATCTTGATCATCAAGGATGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAG
CCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGTGGAGATGGA
TTCAATGAAAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGACTCATGGAAAGTAAAATCGGATTACCTTGTGATCAAGCATGATATGAACCA
AGGACCACCTATTGTCATGCCTGAATGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGG
TTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAA
Protein sequenceShow/hide protein sequence
MGLHFNHELVSLHFLCLDLHARIIQVALIKLLVDDSNHEFRNEFSLLLILIIKDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDG
FNENLHARVIQVVLIVPLVDSWKVKSDYLVIKHDMNQGPPIVMPECPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCKVELQDGDALNAF