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Tan0003881 (gene) of Snake gourd v1 genome

Gene IDTan0003881
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein SPIRAL1-like 1
Genome locationLG02:91675460..91678373
RNA-Seq ExpressionTan0003881
SyntenyTan0003881
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0140657 - ATP-dependent activity (molecular function)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585249.1 Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia]5.7e-3486.27Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPP----SKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFG  ES NAGAPKGGQAPAPAP PAP     S EGK VSKPAASKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPP----SKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  IT
        IT
Subjt:  IT

XP_022951957.1 protein SPIRAL1-like 1 [Cucurbita moschata]4.8e-3383.65Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPP------SKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTG
        MGRGVSSGGGQSSLGYLFG  ES NAGAPKGGQAPAPAP PAP       S E K VSKPAASKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTG
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPP------SKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTG

Query:  NFIT
        NFIT
Subjt:  NFIT

XP_022961880.1 protein SPIRAL1-like 2 [Cucurbita moschata]2.0e-3184.69Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGRGVSSGGGQSSLGYLFG  E+ NAGAPKGGQ        APPS EGK VSKPAASKPAATASPPADA KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

XP_023002715.1 protein SPIRAL1-like 1 [Cucurbita maxima]4.8e-3385.29Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQ----APAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFG  ES NAGAPKGGQ    APAPAP PAP S EGK VSKPAA KPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQ----APAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  IT
        IT
Subjt:  IT

XP_023537697.1 protein SPIRAL1-like 1 [Cucurbita pepo subsp. pepo]2.8e-3385.29Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPP----SKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFG  ES NAGAPKGGQAPAPAP PAP     S E K VSKPAASKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPP----SKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  IT
        IT
Subjt:  IT

TrEMBL top hitse value%identityAlignment
A0A1S3BCR3 protein SPIRAL1-like 11.2e-2982.65Show/hide
Query:  GRGVSSGGGQSSLGYLFGHDESSNAGAPKGG-QAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        GRGVSSGGGQSSLGYLFG  ++ NAGAPKGG QAP       PPS EGKTVSKPA SKPAATASPPAD  KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  GRGVSSGGGQSSLGYLFGHDESSNAGAPKGG-QAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

A0A6J1GJ28 protein SPIRAL1-like 12.3e-3383.65Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPP------SKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTG
        MGRGVSSGGGQSSLGYLFG  ES NAGAPKGGQAPAPAP PAP       S E K VSKPAASKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTG
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPP------SKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTG

Query:  NFIT
        NFIT
Subjt:  NFIT

A0A6J1HDG7 protein SPIRAL1-like 29.8e-3284.69Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGRGVSSGGGQSSLGYLFG  E+ NAGAPKGGQ        APPS EGK VSKPAASKPAATASPPADA KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

A0A6J1K972 protein SPIRAL1-like 29.8e-3284.69Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGRGVSSGGGQSSLGYLFG  E+ NAGAPKGGQ        APPS EGK VSKPAASKPAATASPPADA KQIPAGIHSSSSNNYLRADGQNTGNFIT
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

A0A6J1KPR8 protein SPIRAL1-like 12.3e-3385.29Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQ----APAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNF
        MGRGVSSGGGQSSLGYLFG  ES NAGAPKGGQ    APAPAP PAP S EGK VSKPAA KPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNF
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQ----APAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNF

Query:  IT
        IT
Subjt:  IT

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 15.2e-1455.56Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAP-PSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGRGVS GGGQSSLGYLFG            G+AP PA   AP PS E   +S  A   P   A+   +  KQIPAGI+ SS+NNY+RADGQNTGNF+T
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAP-PSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

Q2QQ99 Protein SPIRAL1-like 36.8e-1452.04Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGRGVSSGGGQSSLGYLFG  E     APK  + PAP   PAP S                     A+  K+IPAGI SS +NNY+RA+GQN GNF+T
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

Q7Y1L9 Protein SPIRAL1-like 19.5e-1657Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSN-AGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSS-SSNNYLRADGQNTGNFIT
        M RG S+GGGQSSLGYLFG +E+   A  P    APAPAP PAP +       KP+ +K        ADA KQIPAGI  S S+NNY RADGQNTGNF+T
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSN-AGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSS-SSNNYLRADGQNTGNFIT

Q9LE54 Protein SPIRAL1-like 25.7e-1348.98Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGRGVS+GGGQSSLGYLFG  E+    A     A   +   APP++              A A+   D+ KQ+PAG++S+S+NNY+RA+GQNTGNFIT
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

Q9SJW3 Protein SPIRAL19.8e-1356.31Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPT-----PAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGN
        MGRG S GGGQSSL YLFG D    A APK   AP PAPT     PAPP     T     A   A T+  PA+ NKQIPAGI  +  NNY RA+GQNTGN
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPT-----PAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGN

Query:  FIT
        F+T
Subjt:  FIT

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like13.7e-1555.56Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAP-PSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGRGVS GGGQSSLGYLFG            G+AP PA   AP PS E   +S  A   P   A+   +  KQIPAGI+ SS+NNY+RADGQNTGNF+T
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAP-PSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

AT1G69230.1 SPIRAL1-like24.1e-1448.98Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGRGVS+GGGQSSLGYLFG  E+    A     A   +   APP++              A A+   D+ KQ+PAG++S+S+NNY+RA+GQNTGNFIT
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

AT1G69230.2 SPIRAL1-like24.1e-1448.98Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT
        MGRGVS+GGGQSSLGYLFG  E+    A     A   +   APP++              A A+   D+ KQ+PAG++S+S+NNY+RA+GQNTGNFIT
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFIT

AT2G03680.1 spiral17.0e-1456.31Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPT-----PAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGN
        MGRG S GGGQSSL YLFG D    A APK   AP PAPT     PAPP     T     A   A T+  PA+ NKQIPAGI  +  NNY RA+GQNTGN
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPT-----PAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGN

Query:  FIT
        F+T
Subjt:  FIT

AT2G03680.2 spiral17.0e-1456.31Show/hide
Query:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPT-----PAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGN
        MGRG S GGGQSSL YLFG D    A APK   AP PAPT     PAPP     T     A   A T+  PA+ NKQIPAGI  +  NNY RA+GQNTGN
Subjt:  MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPT-----PAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGN

Query:  FIT
        F+T
Subjt:  FIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCATTGGGGTATCTGTTTGGTCATGATGAATCTTCCAATGCAGGTGCCCCTAAAGGTGGCCAAGCACCAGCACC
AGCACCAACACCCGCACCACCTTCTAAGGAAGGGAAAACTGTATCCAAACCAGCAGCCTCCAAACCTGCTGCTACTGCTTCACCACCTGCAGATGCTAACAAGCAGATTC
CAGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCAGACGGTCAGAACACTGGCAATTTCATAACGATGTTTGCATCTCCAACTTGCTTCACGTGTGTAAGG
TCTTATAACTTCACAGAGGAATCAAATAATCGTCCAATTAGGGCCAGACAGACACAAACGAGGACTGTAACTTATCTTTGGAAAAACGGCACTATGAGGAAGAAAGCTTT
GTTACCCTGA
mRNA sequenceShow/hide mRNA sequence
ATAAATAAATAATTTCACGAGTATCTTCCAGACTGCGTGCTAGGTACAGAGTACACCAGCCCACTCATTTCTTCGTTCCCTCTGAAACTCTGAAGTTCGCCTCAGATCCG
ATCGTCGCCGGAAGGCAAGCTTCTGAGTTGTGACGTTTGAAAGAAATCGAAGAGCCATGGGCCGTGGAGTTAGCAGTGGTGGGGGGCAGAGCTCATTGGGGTATCTGTTT
GGTCATGATGAATCTTCCAATGCAGGTGCCCCTAAAGGTGGCCAAGCACCAGCACCAGCACCAACACCCGCACCACCTTCTAAGGAAGGGAAAACTGTATCCAAACCAGC
AGCCTCCAAACCTGCTGCTACTGCTTCACCACCTGCAGATGCTAACAAGCAGATTCCAGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCAGACGGTCAGA
ACACTGGCAATTTCATAACGATGTTTGCATCTCCAACTTGCTTCACGTGTGTAAGGTCTTATAACTTCACAGAGGAATCAAATAATCGTCCAATTAGGGCCAGACAGACA
CAAACGAGGACTGTAACTTATCTTTGGAAAAACGGCACTATGAGGAAGAAAGCTTTGTTACCCTGATATGATAACTACTGCAGGGCATTATAGCGAATTTGTTTGAAACC
CCCCGTTATACACTGATTGATTAGTTTTCTTTTTGGGTCCAGGATCGGCCTTCAACCAAGGTCCATGCAGCCCCAGGCGGTGGATCATCTCTGGATTATCTGTTTGGTGG
TGCTGGTGGAAAATGAAAGCTGCCAAATCATAACTAAATAGAGCCTATTTGACTATCCATTTTATGTGAATTTTTATATGATGTTGAAGTTGAAGGGCAATGTTTTTTTT
TTCCATCTGAAATGATACTATGGCGGGACGATATGCTTTACAATTTGTAGATGCTATGGTTGCTGCTGCTGCTCTGTTGTTGGGTTTTATTCAATCAAATTTTTATTTTG
GATTCATGAAAAGAAGCTGTTGTGGAGCTGTCTAAGGATCTTTCTTATGCACAACTCTCTTTTACTATGCTCTTTTGTTTTTTATTCAGATTTTAGCATCCACATTTTGA
TTGAAGTGTGAC
Protein sequenceShow/hide protein sequence
MGRGVSSGGGQSSLGYLFGHDESSNAGAPKGGQAPAPAPTPAPPSKEGKTVSKPAASKPAATASPPADANKQIPAGIHSSSSNNYLRADGQNTGNFITMFASPTCFTCVR
SYNFTEESNNRPIRARQTQTRTVTYLWKNGTMRKKALLP