; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003918 (gene) of Snake gourd v1 genome

Gene IDTan0003918
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA-binding protein 24-A
Genome locationLG01:50447035..50452214
RNA-Seq ExpressionTan0003918
SyntenyTan0003918
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045404.1 RNA-binding protein 24-A [Cucumis melo var. makuwa]1.1e-13586.97Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH P P S+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY
        RANCNLASLGRPRPPIS+  GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYG                          YATYGPEYVY
Subjt:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY

Query:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPS  P
Subjt:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

KAG7030017.1 putative RNA-binding protein ARP1 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-15081.05Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH   P S+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ
        RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYG                          YATYGPEYVYPQ
Subjt:  RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ

Query:  GGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSPLVWPFGLFLEAIFENVFV
        GGYNPFVGQQYLQIYGVPGSASP IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQF GPNVN LTSSPMPTIQAPYPS  P +           +N  +
Subjt:  GGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSPLVWPFGLFLEAIFENVFV

Query:  HQGYQHLLQHNHSSLFILLLSLYKVAGLTKHLGEELISRMVWC
         +G QHLLQHNHSSL ILLLSLYKVA LT+HLGEELIS    C
Subjt:  HQGYQHLLQHNHSSLFILLLSLYKVAGLTKHLGEELISRMVWC

XP_004146763.1 RNA-binding protein 24-A [Cucumis sativus]6.2e-13686.97Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH P P S+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY
        RANCNLASLGRPRPP+SY  GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYG                          YATYGPEYVY
Subjt:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY

Query:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPS  P
Subjt:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

XP_008464801.1 PREDICTED: RNA-binding protein 24-A [Cucumis melo]1.1e-13586.97Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH P P S+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY
        RANCNLASLGRPRPPIS+  GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYG                          YATYGPEYVY
Subjt:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY

Query:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPS  P
Subjt:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

XP_022946505.1 RNA-binding protein 24-A [Cucurbita moschata]3.1e-13586.52Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH   P S+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ
        RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYG                          YATYGPEYVYPQ
Subjt:  RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ

Query:  GGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        GGYNPFVGQQYLQIYGVPGSASP IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQF GPNVN LTSSPMPTIQAPYPS  P
Subjt:  GGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

TrEMBL top hitse value%identityAlignment
A0A0A0KHA9 RRM domain-containing protein3.0e-13686.97Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH P P S+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY
        RANCNLASLGRPRPP+SY  GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYG                          YATYGPEYVY
Subjt:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY

Query:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPS  P
Subjt:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

A0A1S3CME8 RNA-binding protein 24-A5.1e-13686.97Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH P P S+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY
        RANCNLASLGRPRPPIS+  GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYG                          YATYGPEYVY
Subjt:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY

Query:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPS  P
Subjt:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

A0A5D3CHF9 RNA-binding protein 24-A5.1e-13686.97Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH P P S+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY
        RANCNLASLGRPRPPIS+  GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYG                          YATYGPEYVY
Subjt:  RANCNLASLGRPRPPISY--GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVY

Query:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPS  P
Subjt:  PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

A0A6J1DNT6 RNA-binding protein 24-A9.6e-13584.75Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHIP P S+SGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ
        RANCNLASLGRPRPPISYGRLRPPA YVGGMQPNRGT+IGNFGYQQPVSYAYQQGLAYPPYG                          YA YGPEY+YPQ
Subjt:  RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ

Query:  GGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        GGYNPF+GQQYLQIYG+PGS SP IYHYGQLGQTVPGGHGYG VHGYAMPSPQIVQFSGPNVNALTSSP+PTIQAPYPS  P
Subjt:  GGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

A0A6J1G3W1 RNA-binding protein 24-A1.5e-13586.52Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH   P S+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ
        RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYG                          YATYGPEYVYPQ
Subjt:  RANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ

Query:  GGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        GGYNPFVGQQYLQIYGVPGSASP IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQF GPNVN LTSSPMPTIQAPYPS  P
Subjt:  GGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

SwissProt top hitse value%identityAlignment
D3Z4I3 RNA-binding protein 246.4e-2750Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAVY
        DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG      +  R+  P   
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAVY

Query:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP
         G  Q +       FG   P  Y Y Q    P
Subjt:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP

Q5ZMA3 RNA-binding protein 246.4e-2738.53Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAVY
        DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG      +  R+  P   
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAVY

Query:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFH----YFEYHRSYATYGPEYVY-----------PQGGYNPFVGQQYL
         G  Q +       FG   P  Y Y Q    P        P  A+     +  +    Y +Y  + A Y  +Y Y             GGY   V Q   
Subjt:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFH----YFEYHRSYATYGPEYVY-----------PQGGYNPFVGQQYL

Query:  QIYGVPGSASPTIYHYGQ
             PG+A+     +GQ
Subjt:  QIYGVPGSASPTIYHYGQ

Q76LC6 RNA-binding protein 243.7e-2738.84Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLG-RPR---PPISYGRLRP
        DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG +PR   P  ++G    
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLG-RPR---PPISYGRLRP

Query:  PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ---------GGYNPFVGQQ
        P ++   +Q   G          P  Y Y Q    P    P+   +     AS+P   +    +  + S AT      Y Q          GY    G  
Subjt:  PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQ---------GGYNPFVGQQ

Query:  YLQ----IYGVPGSASPTIYHYGQ
        Y          PGSA+     +GQ
Subjt:  YLQ----IYGVPGSASPTIYHYGQ

Q9BX46 RNA-binding protein 242.9e-2750.76Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAVY
        DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG      +  R+  P   
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPAVY

Query:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP
         G  Q +       FG   P  Y Y Q    P
Subjt:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP

Q9M1S3 Probable RNA-binding protein ARP11.2e-2839.39Show/hide
Query:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI
        ++S  +N  FGDT  TKVFVGGLAW+T  E M  +F ++G+ILEAV+I+DK T RSKGYGFVTF+D ++A RAC D TPII+GRRANCNLASLG      
Subjt:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI

Query:  SYGRLRPPAVYV----GGMQPNRGT--YIGNFG-YQQPVSYAYQQ-----GLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQGGYN
          GRLR          G    NR T  ++GN   +  P  +  QQ       A P YG     P     P  TF         +Y       + PQ    
Subjt:  SYGRLRPPAVYV----GGMQPNRGT--YIGNFG-YQQPVSYAYQQ-----GLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQGGYN

Query:  PFVGQQYLQIYG----VPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPS-PQIVQFSGPNVN
        P     +  +YG    + G+ASP +  Y     TV   H   A+ G+  PS  + + FS P ++
Subjt:  PFVGQQYLQIYG----VPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPS-PQIVQFSGPNVN

Arabidopsis top hitse value%identityAlignment
AT1G20880.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.8e-8356.21Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAY  IP        SS   +LNSPFGDTT+TKVFVGGLAWETQSET+RR+F+Q+G+ILEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY-------GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYG
        RANCNLASLGR RPP+ Y       GR+RPP+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PYG                             YG
Subjt:  RANCNLASLGRPRPPISY-------GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYG

Query:  PEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVS
        P+Y+Y   QG Y P++GQQYLQ+YGVPG+ +   Y YGQL  T+PG HGY A  GY+ P   ++Q          +SPM  IQ+PYPS S
Subjt:  PEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVS

AT1G20880.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.8e-8356.21Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAY  IP        SS   +LNSPFGDTT+TKVFVGGLAWETQSET+RR+F+Q+G+ILEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY-------GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYG
        RANCNLASLGR RPP+ Y       GR+RPP+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PYG                             YG
Subjt:  RANCNLASLGRPRPPISY-------GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYG

Query:  PEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVS
        P+Y+Y   QG Y P++GQQYLQ+YGVPG+ +   Y YGQL  T+PG HGY A  GY+ P   ++Q          +SPM  IQ+PYPS S
Subjt:  PEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVS

AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-4544.06Show/hide
Query:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRP--
        S++ +  SPFGDTT+TKVFVGGLAWET ++ MRRYF+QFGEILEAV+ITDK TG+SKGYGFVTFRD +SA RA ADP P+IDGR+ANCN+AS GRPRP  
Subjt:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRP--

Query:  PISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQGGYNPFVGQ-QYL-
        P   G+   P+ Y GG Q +        G   PV  A    L YP YG                            TY  EY Y Q  YN  + Q QY  
Subjt:  PISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQGGYNPFVGQ-QYL-

Query:  -QIYGVPGSASPTI-------YHYGQLGQTVPGGH---GYGAVH--------GYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPS
         Q+YG  G+ SP+        Y+Y Q     P  H    Y   H           +PS         NV A T S +PT Q P  S
Subjt:  -QIYGVPGSASPTI-------YHYGQLGQTVPGGH---GYGAVH--------GYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPS

AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-9360.48Show/hide
Query:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQ  P PG      S   +LNSPFGDTT+TKVFVGGLAWETQSET+R++FEQ+GEILEAVVI DKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGR
Subjt:  MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY-------GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYG
        RANCNLASLGRPRPP+ Y       GRLRP + Y+G +Q  RG+ IGN+ YQQP+ Y YQQG+ Y PYG  +                          YG
Subjt:  RANCNLASLGRPRPPISY-------GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYG

Query:  PEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP
        PEY+Y   QG Y+P++GQQYLQ+YGVPG+ +  +Y YGQL QT+P GHGY AV GY++P   I+Q  GP V+ +T+S MP +QAPYPS  P
Subjt:  PEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSP

AT1G78260.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-4445.22Show/hide
Query:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPR--P
        S + +  SPFGDTTYTKVFVGGLAWET ++ MRRYFEQFGEILEAV+ITDKNTG+SKGYGFVTFR+ +SA RA ADP P+IDGR+ANCN+AS GRPR  P
Subjt:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPR--P

Query:  PISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQGGYNPFVGQQYLQI
        P   G+   P+ Y  G      TY    G   P+  A    L YP YG              T+    F YH+  A Y  +    Q        QQ  Q+
Subjt:  PISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQGGYNPFVGQQYLQI

Query:  YG----VPGSASPTI----YHYGQLGQT--VPGGHGYGAVHGYAMPSPQIVQFSGPN--VNALTSSPMPTIQ
        YG     P S+  TI    Y+YG   Q   VP  H +     Y        +FS P+  V    SS  P +Q
Subjt:  YG----VPGSASPTI----YHYGQLGQT--VPGGHGYGAVHGYAMPSPQIVQFSGPN--VNALTSSPMPTIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATCAGCATATTCCGGCTCCTGGTTCCTTATCTGGATCAAGTTCTAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACTACTTACACCAAGGTCTTTGTTGG
TGGCTTGGCCTGGGAGACTCAGAGCGAGACTATGAGGCGCTACTTTGAGCAGTTCGGGGAGATTCTTGAGGCTGTTGTCATAACGGATAAGAATACAGGGAGATCCAAAG
GATATGGTTTCGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGCAGATCCTACTCCAATTATTGATGGCAGGCGAGCCAACTGTAATCTTGCTTCACTTGGC
CGGCCTCGGCCACCTATATCTTATGGACGTTTAAGACCGCCTGCAGTGTACGTTGGTGGCATGCAACCCAACAGGGGAACTTATATCGGAAATTTTGGCTATCAACAACC
GGTTTCTTATGCTTATCAGCAAGGACTTGCATATCCTCCTTATGGGTGTGTCTCTGAGGTTCCTCTATGTGCATCCAATCCTGTCAATACATTCAAATTTCATTATTTTG
AATACCATAGAAGTTATGCTACTTATGGACCTGAGTATGTCTACCCGCAGGGTGGATACAACCCTTTTGTGGGTCAGCAATATCTGCAGATTTATGGGGTGCCTGGGTCA
GCGAGCCCTACTATTTACCATTATGGACAATTAGGTCAGACAGTCCCTGGTGGTCATGGATATGGAGCAGTACATGGATATGCAATGCCAAGTCCTCAGATCGTGCAGTT
TAGTGGTCCTAATGTCAATGCATTAACATCCTCGCCAATGCCTACAATTCAGGCACCATATCCTTCAGTCTCTCCTTTGGTTTGGCCCTTTGGTCTCTTTCTCGAGGCCA
TTTTTGAAAACGTGTTTGTTCATCAGGGATACCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGGTCTGACCAAA
CATCTGGGTGAGGAGTTGATCAGCAGAATGGTATGGTGTATTCTGGAAATATGGGTCCATTTCTCTTACTTAACTGCAGGTCATAGTCATGCTCACCAGAGACGTCAGAT
GGTCTTGAGTCGCTCCAGATGGTGGAGAAGGAATATGGAAGACGCAGGCTGCTCTTCCTCTAAGATCTTTCTTCTTCCCCAGTGTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTATCAGCATATTCCGGCTCCTGGTTCCTTATCTGGATCAAGTTCTAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACTACTTACACCAAGGTCTTTGTTGG
TGGCTTGGCCTGGGAGACTCAGAGCGAGACTATGAGGCGCTACTTTGAGCAGTTCGGGGAGATTCTTGAGGCTGTTGTCATAACGGATAAGAATACAGGGAGATCCAAAG
GATATGGTTTCGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGCAGATCCTACTCCAATTATTGATGGCAGGCGAGCCAACTGTAATCTTGCTTCACTTGGC
CGGCCTCGGCCACCTATATCTTATGGACGTTTAAGACCGCCTGCAGTGTACGTTGGTGGCATGCAACCCAACAGGGGAACTTATATCGGAAATTTTGGCTATCAACAACC
GGTTTCTTATGCTTATCAGCAAGGACTTGCATATCCTCCTTATGGGTGTGTCTCTGAGGTTCCTCTATGTGCATCCAATCCTGTCAATACATTCAAATTTCATTATTTTG
AATACCATAGAAGTTATGCTACTTATGGACCTGAGTATGTCTACCCGCAGGGTGGATACAACCCTTTTGTGGGTCAGCAATATCTGCAGATTTATGGGGTGCCTGGGTCA
GCGAGCCCTACTATTTACCATTATGGACAATTAGGTCAGACAGTCCCTGGTGGTCATGGATATGGAGCAGTACATGGATATGCAATGCCAAGTCCTCAGATCGTGCAGTT
TAGTGGTCCTAATGTCAATGCATTAACATCCTCGCCAATGCCTACAATTCAGGCACCATATCCTTCAGTCTCTCCTTTGGTTTGGCCCTTTGGTCTCTTTCTCGAGGCCA
TTTTTGAAAACGTGTTTGTTCATCAGGGATACCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGGTCTGACCAAA
CATCTGGGTGAGGAGTTGATCAGCAGAATGGTATGGTGTATTCTGGAAATATGGGTCCATTTCTCTTACTTAACTGCAGGTCATAGTCATGCTCACCAGAGACGTCAGAT
GGTCTTGAGTCGCTCCAGATGGTGGAGAAGGAATATGGAAGACGCAGGCTGCTCTTCCTCTAAGATCTTTCTTCTTCCCCAGTGTTTATAA
Protein sequenceShow/hide protein sequence
MAYQHIPAPGSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLG
RPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGCVSEVPLCASNPVNTFKFHYFEYHRSYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGS
ASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSVSPLVWPFGLFLEAIFENVFVHQGYQHLLQHNHSSLFILLLSLYKVAGLTK
HLGEELISRMVWCILEIWVHFSYLTAGHSHAHQRRQMVLSRSRWWRRNMEDAGCSSSKIFLLPQCL