; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003920 (gene) of Snake gourd v1 genome

Gene IDTan0003920
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein like
Genome locationLG09:70663456..70670365
RNA-Seq ExpressionTan0003920
SyntenyTan0003920
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEW35062.1 hypothetical protein [Tanacetum cinerariifolium]2.2e-1730.93Show/hide
Query:  EDLENNNDAICSICREEIQLGKEEEEEEEEERKLVCGHGFHKNCIRAWLLIKNTCPICRYRLPQLQNPLLNNNNYERPNFQLRLFHLL-----FCLFLTF
        ED+E  ND  C++C++E+++GK   +       L C H +H +CI  WL I+NTCP+CR+ L      L    +     F L   H         + L +
Subjt:  EDLENNNDAICSICREEIQLGKEEEEEEEEERKLVCGHGFHKNCIRAWLLIKNTCPICRYRLPQLQNPLLNNNNYERPNFQLRLFHLL-----FCLFLTF

Query:  FLLLFLMWFE-NGEMN--------------------------------RPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKI
         LL+ ++ +E N E+N                                RP A  A    ++E+L +V++  T+E+ + ND          C +C DE+ +
Subjt:  FLLLFLMWFE-NGEMN--------------------------------RPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKI

Query:  GEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQLL
        G+   QLPC H YH  CI PWL IR TCP+ R +LL
Subjt:  GEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQLL

KAF2584887.1 hypothetical protein F2Q70_00037860 [Brassica cretica]3.1e-1933.33Show/hide
Query:  DAICSICREEIQLGKEEEEEEEEERKLVCGHGFHKNCIRAWLLIKNTCPICRYRLPQLQNPLLNNNNYERPNFQLRLFHLLFCLFLTFFLLLFLMWFENG
        + +C++C++E+ +       EEE ++L C H +H  CI  WL I+NTCP+CR+ LP       ++ +YER     R    LF                  
Subjt:  DAICSICREEIQLGKEEEEEEEEERKLVCGHGFHKNCIRAWLLIKNTCPICRYRLPQLQNPLLNNNNYERPNFQLRLFHLLFCLFLTFFLLLFLMWFENG

Query:  EMNRPTADAATISTVMESLPSVILIETEEEDD--DNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
                          L    L+     DD  D +  G  +    C +C DE+ I EE K+LPCRHLYH  CI PWL IR TCP+CR +L
Subjt:  EMNRPTADAATISTVMESLPSVILIETEEEDD--DNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

PSR95747.1 E3 ubiquitin-protein like [Actinidia chinensis var. chinensis]4.6e-1549.46Show/hide
Query:  ENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        EN  + RP A      TV+E+LPSV+L    +ED +NDN         C +C D I +GE+AKQLPC H YH  CI PWL IR TCP+CR++L
Subjt:  ENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

PSR96583.1 E3 ubiquitin-protein like [Actinidia chinensis var. chinensis]3.5e-1550.54Show/hide
Query:  ENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        EN  + RP A      TV+E+LPSVIL    +ED +NDN         C +C D I +GE+AKQLPC H YH  CI PWL IR TCP+CR++L
Subjt:  ENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

PWA62288.1 Zinc finger, RING/FYVE/PHD-type [Artemisia annua]1.2e-2034.42Show/hide
Query:  EDLENNNDAICSICREEIQLGKEEEEEEEEERKLVCGHGFHKNCIRAWLLIKNTCPICRYRLPQLQNPLLNNNNYERPNFQ---LRLFHLLFCLFLTF--
        ED+E  ND IC++C++E+++GK   +       L C H +H +CI  WL I+NTCP+CR+ L      L ++  YER   +   L  + + F   + +  
Subjt:  EDLENNNDAICSICREEIQLGKEEEEEEEEERKLVCGHGFHKNCIRAWLLIKNTCPICRYRLPQLQNPLLNNNNYERPNFQ---LRLFHLLFCLFLTF--

Query:  ----------FLLLFLMWFENGE--MNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPW
                    +LF  + EN    + RP A  A    V+E+L +V++  T+E+ + ND          C +C DE+++G+ A QLPC H YH  CI PW
Subjt:  ----------FLLLFLMWFENGE--MNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPW

Query:  LEIRTTCPLCRHQLL
        L I+ TCP+C+ +LL
Subjt:  LEIRTTCPLCRHQLL

TrEMBL top hitse value%identityAlignment
A0A2U1MM16 Zinc finger, RING/FYVE/PHD-type6.0e-2134.42Show/hide
Query:  EDLENNNDAICSICREEIQLGKEEEEEEEEERKLVCGHGFHKNCIRAWLLIKNTCPICRYRLPQLQNPLLNNNNYERPNFQ---LRLFHLLFCLFLTF--
        ED+E  ND IC++C++E+++GK   +       L C H +H +CI  WL I+NTCP+CR+ L      L ++  YER   +   L  + + F   + +  
Subjt:  EDLENNNDAICSICREEIQLGKEEEEEEEEERKLVCGHGFHKNCIRAWLLIKNTCPICRYRLPQLQNPLLNNNNYERPNFQ---LRLFHLLFCLFLTF--

Query:  ----------FLLLFLMWFENGE--MNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPW
                    +LF  + EN    + RP A  A    V+E+L +V++  T+E+ + ND          C +C DE+++G+ A QLPC H YH  CI PW
Subjt:  ----------FLLLFLMWFENGE--MNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPW

Query:  LEIRTTCPLCRHQLL
        L I+ TCP+C+ +LL
Subjt:  LEIRTTCPLCRHQLL

A0A314UWE3 RING-type domain-containing protein3.8e-1548Show/hide
Query:  LLFLMWFENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        LLF  + EN   N  T      + V+E+LPSV+L    +ED DN N         C +C D++ IGE+AKQLPC H YH  CI PWL IR TCP+CRH+L
Subjt:  LLFLMWFENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

A0A5E4EZZ5 PREDICTED: E33.8e-1548Show/hide
Query:  LLFLMWFENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        LLF  + EN   N  T      + V+E+LPSV+L    +ED DN N         C +C D++ IGE+AKQLPC H YH  CI PWL IR TCP+CRH+L
Subjt:  LLFLMWFENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

A0A5E4F009 PREDICTED: E33.8e-1548Show/hide
Query:  LLFLMWFENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        LLF  + EN   N  T      + V+E+LPSV+L    +ED DN N         C +C D++ IGE+AKQLPC H YH  CI PWL IR TCP+CRH+L
Subjt:  LLFLMWFENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

A0A6P5RYX9 uncharacterized protein LOC1107533773.8e-1548Show/hide
Query:  LLFLMWFENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        LLF  + EN   N  T      + V+E+LPSV+L    +ED DN N         C +C D++ IGE+AKQLPC H YH  CI PWL IR TCP+CRH+L
Subjt:  LLFLMWFENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

SwissProt top hitse value%identityAlignment
O22197 Probable E3 ubiquitin-protein ligase RHC1A7.1e-1136.36Show/hide
Query:  TVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        + +++LP++ + +      D++          C +C DE ++G EAKQ+PC H+YHS CI PWL    +CP+CR +L
Subjt:  TVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

P0CH30 E3 ubiquitin-protein ligase RING15.8e-1340.26Show/hide
Query:  TVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        + +E+LP V + ++    + N           C +CMD+ + G EAKQ+PC+HLYH  C+ PWLE+  +CP+CRH+L
Subjt:  TVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

Q6AVN2 E3 ubiquitin-protein ligase SIRP18.4e-1251.11Show/hide
Query:  CCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        C +C+D++++G +AKQ+PC H +HS CI PWLE+ ++CP+CR +L
Subjt:  CCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

Q6GPV5 E3 ubiquitin-protein ligase RNF1819.3e-1144.74Show/hide
Query:  VMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        V+ESLP V +  T E+ D             C +C+ E + GE  +QLPC HL+HS CI PWL    +CPLCRH+L
Subjt:  VMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

Q8RXD3 E3 ubiquitin-protein ligase AIP29.3e-1146.67Show/hide
Query:  CCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        CCIC + + IG++ ++LPC+H +H  C++PWL+   +CP+CRH+L
Subjt:  CCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

Arabidopsis top hitse value%identityAlignment
AT2G44330.1 RING/U-box superfamily protein6.0e-1341.33Show/hide
Query:  MESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        MESLP++ +  +      +D++  P     C IC ++  +GE A++LPC HLYH+ CI PWL    +CPLCR +L
Subjt:  MESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

AT3G02340.1 RING/U-box superfamily protein1.6e-1338.71Show/hide
Query:  ENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        E G    P A      +V++ LP   ++E   E+ D  NN        C +C DE+ + E+ ++LPC H YH  CI PWL IR TCP+CR++L
Subjt:  ENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

AT3G60080.1 RING/U-box superfamily protein6.0e-1337.5Show/hide
Query:  TADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQLLPT
        ++D  +I T+   + S +L  T++ D D+        +  C +C ++  IGE A++LPC H+YHS CI PWL    +CPLCR +L  T
Subjt:  TADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQLLPT

AT5G08139.1 RING/U-box superfamily protein2.2e-1545Show/hide
Query:  TISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        T  + + +LP V+L+E E +DD             C +C DE+ IG +A QLPC H YHS CI PWL++R TCP+CR++L
Subjt:  TISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL

AT5G15820.1 RING/U-box superfamily protein6.0e-1360Show/hide
Query:  CCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL
        C IC DE+   E+ K+LPC+H YH  CI PWL IR TCP+CRH+L
Subjt:  CCICMDEIKIGEEAKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAGATTCTTTCCGGCAGCGGCGAGGAATCCCAATCCGAAGCCCTAAATTCGAATCTCCTTCCTAAAATGACTCAATCGACGGCCGTATCGGTGACGATTACAAT
AGAACAGCAAGTATCTCCAGAATCGACAGTAAACGAAACGAGGAGAGAATTAAATGAAGATTTGGAGAACAATAACGATGCGATTTGTTCGATTTGTAGGGAAGAAATTC
AATTGGGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGGAAATTGGTGTGTGGGCATGGATTTCACAAGAACTGTATTAGGGCTTGGTTGCTTATAAAAAATACATGT
CCCATTTGCCGATATCGATTGCCTCAGCTGCAAAACCCTTTGCTGAATAATAATAATTATGAGCGCCCCAACTTTCAATTGCGGCTTTTTCATCTGCTCTTCTGTCTCTT
TCTTACCTTCTTTCTTCTTCTTTTTCTAATGTGGTTTGAAAACGGGGAGATGAATCGACCAACTGCTGATGCAGCAACAATATCAACAGTTATGGAGAGCCTTCCATCGG
TGATTTTGATAGAAACAGAAGAAGAAGATGATGATAATGATAATAATGGTGCGCCAATATTAATATTTTTTTGTTGTATTTGTATGGATGAGATTAAAATAGGGGAAGAA
GCGAAGCAGTTACCGTGCCGCCATTTGTATCATAGTCTTTGCATTAGGCCCTGGTTGGAGATTAGAACTACTTGTCCACTTTGCCGTCATCAATTATTGCCTACACCAAA
CTGA
mRNA sequenceShow/hide mRNA sequence
CGGCGATGGCGCAGATTCTTTCCGGCAGCGGCGAGGAATCCCAATCCGAAGCCCTAAATTCGAATCTCCTTCCTAAAATGACTCAATCGACGGCCGTATCGGTGACGATT
ACAATAGAACAGCAAGTATCTCCAGAATCGACAGTAAACGAAACGAGGAGAGAATTAAATGAAGATTTGGAGAACAATAACGATGCGATTTGTTCGATTTGTAGGGAAGA
AATTCAATTGGGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGGAAATTGGTGTGTGGGCATGGATTTCACAAGAACTGTATTAGGGCTTGGTTGCTTATAAAAAATA
CATGTCCCATTTGCCGATATCGATTGCCTCAGCTGCAAAACCCTTTGCTGAATAATAATAATTATGAGCGCCCCAACTTTCAATTGCGGCTTTTTCATCTGCTCTTCTGT
CTCTTTCTTACCTTCTTTCTTCTTCTTTTTCTAATGTGGTTTGAAAACGGGGAGATGAATCGACCAACTGCTGATGCAGCAACAATATCAACAGTTATGGAGAGCCTTCC
ATCGGTGATTTTGATAGAAACAGAAGAAGAAGATGATGATAATGATAATAATGGTGCGCCAATATTAATATTTTTTTGTTGTATTTGTATGGATGAGATTAAAATAGGGG
AAGAAGCGAAGCAGTTACCGTGCCGCCATTTGTATCATAGTCTTTGCATTAGGCCCTGGTTGGAGATTAGAACTACTTGTCCACTTTGCCGTCATCAATTATTGCCTACA
CCAAACTGA
Protein sequenceShow/hide protein sequence
MAQILSGSGEESQSEALNSNLLPKMTQSTAVSVTITIEQQVSPESTVNETRRELNEDLENNNDAICSICREEIQLGKEEEEEEEEERKLVCGHGFHKNCIRAWLLIKNTC
PICRYRLPQLQNPLLNNNNYERPNFQLRLFHLLFCLFLTFFLLLFLMWFENGEMNRPTADAATISTVMESLPSVILIETEEEDDDNDNNGAPILIFFCCICMDEIKIGEE
AKQLPCRHLYHSLCIRPWLEIRTTCPLCRHQLLPTPN