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Tan0003921 (gene) of Snake gourd v1 genome

Gene IDTan0003921
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionhistone deacetylase complex subunit SAP18
Genome locationLG10:2596641..2599583
RNA-Seq ExpressionTan0003921
SyntenyTan0003921
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133896.1 histone deacetylase complex subunit SAP18 isoform X2 [Cucumis sativus]3.2e-5794.17Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYG PPRATHAPPRPRLEPVDREKTCPLLLRVFTK GSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSIS
        LVYPDRHGRFV+REV  + S
Subjt:  LVYPDRHGRFVVREVSLSIS

XP_008438121.1 PREDICTED: histone deacetylase complex subunit SAP18 [Cucumis melo]2.9e-5895.83Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSIS
        LVYPDRHGRFV+REV  + S
Subjt:  LVYPDRHGRFVVREVSLSIS

XP_022943948.1 histone deacetylase complex subunit SAP18-like [Cucurbita moschata]1.1e-5786.23Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRA HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ
        LVYPDRHGRFVVREV  + S  +    D      L FQ
Subjt:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ

XP_022974173.1 histone deacetylase complex subunit SAP18-like [Cucurbita maxima]1.1e-5786.23Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRA HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ
        LVYPDRHGRFVVREV  + S  +    D      L FQ
Subjt:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ

XP_023538738.1 histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo]1.1e-5786.23Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRA HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ
        LVYPDRHGRFVVREV  + S  +    D      L FQ
Subjt:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ

TrEMBL top hitse value%identityAlignment
A0A0A0L6C9 Uncharacterized protein1.5e-5794.17Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYG PPRATHAPPRPRLEPVDREKTCPLLLRVFTK GSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSIS
        LVYPDRHGRFV+REV  + S
Subjt:  LVYPDRHGRFVVREVSLSIS

A0A1S3AVL4 histone deacetylase complex subunit SAP181.4e-5895.83Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSIS
        LVYPDRHGRFV+REV  + S
Subjt:  LVYPDRHGRFVVREVSLSIS

A0A5D3D2K7 Histone deacetylase complex subunit SAP181.4e-5895.83Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSIS
        LVYPDRHGRFV+REV  + S
Subjt:  LVYPDRHGRFVVREVSLSIS

A0A6J1FXI8 histone deacetylase complex subunit SAP18-like5.3e-5886.23Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRA HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ
        LVYPDRHGRFVVREV  + S  +    D      L FQ
Subjt:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ

A0A6J1IFF7 histone deacetylase complex subunit SAP18-like5.3e-5886.23Show/hide
Query:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPRA HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ
        LVYPDRHGRFVVREV  + S  +    D      L FQ
Subjt:  LVYPDRHGRFVVREVSLSISLLSSSHSDMHTHIYLCFQ

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP182.5e-2052.13Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREVSLSIS
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+  ++S
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREVSLSIS

O55128 Histone deacetylase complex subunit SAP183.2e-2052.13Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREVSLSIS
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+  ++S
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREVSLSIS

O64644 Histone deacetylase complex subunit SAP185.8e-3864.62Show/hide
Query:  AEAPRRAYGA-----PPRATH-APPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPR  +  PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPRATH-APPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFVVREVSLSISLLSSSHSD
        FA VYP+  G + VREV  +++  +    D
Subjt:  FALVYPDRHGRFVVREVSLSISLLSSSHSD

Q3T022 Histone deacetylase complex subunit SAP182.5e-2052.13Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREVSLSIS
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+  ++S
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREVSLSIS

Q5RDT5 Histone deacetylase complex subunit SAP182.5e-2052.13Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREVSLSIS
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+  ++S
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFVVREVSLSIS

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P184.1e-3964.62Show/hide
Query:  AEAPRRAYGA-----PPRATH-APPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPR  +  PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPRATH-APPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFVVREVSLSISLLSSSHSD
        FA VYP+  G + VREV  +++  +    D
Subjt:  FALVYPDRHGRFVVREVSLSISLLSSSHSD

AT2G45640.2 SIN3 associated polypeptide P186.0e-3869.83Show/hide
Query:  AEAPRRAYGA-----PPRATH-APPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPR  +  PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPRATH-APPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFVVRE
        FA VYP+  G + V E
Subjt:  FALVYPDRHGRFVVRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAGAAGCAGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGCTACTCATGCTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAGACTTGTCC
TTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAATGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATG
CTACTCTTCGAGAGCTAACTGATCTGGTAAAAGAGGTAGCCCCAGAAGCCAGGAGGAGAAATGCTAAACTATCTTTCGCTTTGGTGTATCCTGATAGACATGGCCGGTTT
GTAGTGAGAGAGGTATCTCTTTCTATCTCTCTGCTCTCTTCCTCCCACTCCGACATGCACACACACATATATTTATGTTTTCAGGACAGTACATTGGAAAAATTCATGAT
TCTTCACCCTCTTTACTTAGTTGAGTTTGCCAGTTTTGGTTTTGATTATATGAAATTGAACATGTAG
mRNA sequenceShow/hide mRNA sequence
CGATAGAAATGGCGGGAGAAGCAGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGCTACTCATGCTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAG
ACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAATGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTG
GAAAGATGCTACTCTTCGAGAGCTAACTGATCTGGTAAAAGAGGTAGCCCCAGAAGCCAGGAGGAGAAATGCTAAACTATCTTTCGCTTTGGTGTATCCTGATAGACATG
GCCGGTTTGTAGTGAGAGAGGTATCTCTTTCTATCTCTCTGCTCTCTTCCTCCCACTCCGACATGCACACACACATATATTTATGTTTTCAGGACAGTACATTGGAAAAA
TTCATGATTCTTCACCCTCTTTACTTAGTTGAGTTTGCCAGTTTTGGTTTTGATTATATGAAATTGAACATGTAGTTGAATTAGTGGTCAAATCATTGGTTATTATCAAA
ACTAGGATAGAAATTGCCCAAAACCCAATAGTTATTTGTCCAAAAAATCATCCCACAAAGTACTCAAAATATAGCCTTAGCATTACTGAAACACTCAAAACTCAGTTCAA
GCATAAAAAACCTAACATCAAGGCACACAAACTTAGCTAGCGAAACAAATGCTTAGCTACAAAAACCGATACTCATAAAAAATAATGTGTCCAACTAAAAGAATGCCATA
AATATCAAAGAATAGAATAGCAACTTAACTAAGGGAGAGTAAGTAATTATTTATTCTAGTCTAGGCATCAATTCAACGAAATAAAAATCGTAGCCTGTATGTCAGCCTGT
ATGTTTATGACTTGATTGGACAATGCTTTCAGACTGAACTTTTTCATTGTCTCAAGAAAGTATGAATCGCACAATTTTGTTCAAAGATGGGTAGTTCTGCTTCTAGGATG
TACAAACGCGTTGAACATGCTGACCATGTGCTTATTTTGCATATTCTTGCATATTGTTAAAGGATCACTTGCTATCATGTTCGTTGAATGAACTAACACAATCTTCTGTA
CTAAACATAATGTCTTCATGCCCTGCCAGTTTGCAGTTTTCTTAACCGCAAAGATTTTTCTCTATAAGGGATTAAGTTTCTGATACACTTCGATTTGTGATAAATAGTCT
GCGCATATTGAGTTTGATTGACCTATTTTTGAAAAGAACTTGAAGCAATTTACCTTTACAAACAAAGGTATGAAGAAAGTGAACTATTATATTAGCTCCGAGTAATTCAG
ATTCTGTTTTTTATGAGAAGGTAGGGAAGACATTCTCGTTCGGAAATGGGCGATTAGACGATAACTTGGCTTTGGCAGAACTCGGTTTTCAGATCGGAGATTACTTGGAT
GTGGCCATTATATAGGAAATTTTGGTGCCTTTACATTCTTTAATGCCTATGTCGACTGGAATGATCCTTTTTCACAGTGAAGAACCAAACGAACGCGGATATTAACTTCA
ATCTTGTAATGTATATTCCATAATGTGTTTGGAATCCTTTACATGTTTGTCTTGTTCCCTTGTTCTTTTAGGTAGAATCATGATAGTTACCGTTATGTTCGTTTGAGTTG
CCTTCTTGTTTTAAATGGGCACCAGCATCTGTGATGCATGAAACTAGGCCTTAGGATAGAGTTTAATGATGGAATGGAACTATTTTCGGCCTATAATGATCTCATTTTTA
GTTAAAGAGTATTTTTGAGAATTAACTTTGTTTGATGAATACTTCTTTCTTTTATATATATAACTTCTTAAGTTCATGAA
Protein sequenceShow/hide protein sequence
MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRF
VVREVSLSISLLSSSHSDMHTHIYLCFQDSTLEKFMILHPLYLVEFASFGFDYMKLNM