CuGenDBv2

Gene ID	Tan0003926
Organism	Trichosanthes anguina (Snake gourd v1)
Description	zinc finger SWIM domain-containing protein 7
Genome location	LG01:6217075..6220705
RNA-Seq Expression	Tan0003926
Synteny	Tan0003926
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0097196 - Shu complex (cellular component) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7030956.1 Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma]

4.4e-62

92.42

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS L AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RS+FQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAASLG CIEVKVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

XP_008454376.1 PREDICTED: zinc finger SWIM domain-containing protein 7 [Cucumis melo]

4.4e-62

92.42

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSASI+VAEAVWK+IESTR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKI G PS RSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAAS+G CIEVKVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

XP_022149127.1 zinc finger SWIM domain-containing protein 7 [Momordica charantia]

3.3e-62

93.18

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS +VAEAVWKQI+STRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPS RSIFQVVGESRRKEEYFCFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAASLG  IE KVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

XP_022942858.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata]

3.3e-62

93.18

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS L AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAASLG CIEVKVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

XP_022983272.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima]

3.0e-63

93.94

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS LVAEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAASLG C+EVKVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWG5 SWIM-type domain-containing protein

2.1e-62

92.42

Show/hide

Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSASI+VAEAVWKQIESTR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKI G PS+RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAAS+G CIEVKVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

A0A1S3BZP2 zinc finger SWIM domain-containing protein 7

2.1e-62

92.42

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSASI+VAEAVWK+IESTR VTDDQLS+LHFLFGKNFERATRIVDQRGVKKI G PS RSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAAS+G CIEVKVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

A0A6J1D5Z4 zinc finger SWIM domain-containing protein 7

1.6e-62

93.18

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS +VAEAVWKQI+STRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPS RSIFQVVGESRRKEEYFCFPENFCACYSFFYD VNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAASLG  IE KVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

A0A6J1FSJ7 zinc finger SWIM domain-containing protein 7 isoform X2

1.6e-62

93.18

Show/hide

Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS L AEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RSIFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAASLG CIEVKVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

A0A6J1J6W2 zinc finger SWIM domain-containing protein 7 isoform X2

1.5e-63

93.94

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        MSAS LVAEAVWKQIESTRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPS RSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLAASLG C+EVKVSDEELA LLSNL
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

SwissProt top hits

e value

%identity

Alignment

A4FVI0 Zinc finger SWIM domain-containing protein 7

3.2e-15

36.57

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Query:  SASILVAEAVWKQIEST----RSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPE-NFCACYSFFYDIVNRGE
        S+ + VAE + K ++ T    + + DD L  L F+FG    +A  +VDQ  V  +   PS R  FQV+G S R   Y CF   ++C C +F + ++ R E
Subjt:  SASILVAEAVWKQIEST----RSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPE-NFCACYSFFYDIVNRGE

Query:  QLCCKHQLAARLAASLGVCIEVKVSDEELATLLS
         L CKH LA  L+ ++G+C + +VSD+++  +LS
Subjt:  QLCCKHQLAARLAASLGVCIEVKVSDEELATLLS

Arabidopsis top hits

e value

%identity

Alignment

AT4G33925.1 unknown protein

1.0e-48

66.67

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        M+ ++LVA+AVW  IEST SVT++QLS+L  LFGKN E+ATRI+D+RGVKKI G PS RSIFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL
        KHQLAARLA+SLG   E++VSD+ LA +LS +
Subjt:  KHQLAARLAASLGVCIEVKVSDEELATLLSNL

AT4G33925.2 unknown protein

6.8e-45

68.07

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Query:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC
        M+ ++LVA+AVW  IEST SVT++QLS+L  LFGKN E+ATRI+D+RGVKKI G PS RSIFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CC
Subjt:  MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCC

Query:  KHQLAARLAASLGVCIEVK
        KHQLAARLA+SLG   E++
Subjt:  KHQLAARLAASLGVCIEVK

Sequences

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CDS sequence

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ATGAGTGCGAGCATTCTCGTAGCTGAAGCGGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACTGATGATCAGCTTTCAGTCTTGCATTTCTTGTTTGGCAAGAACTT
CGAGCGAGCTACTCGGATTGTAGATCAAAGAGGGGTGAAGAAAATTTATGGGGAGCCAAGCAGTCGTTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGT
ATTTCTGTTTTCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAACTTTGTTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCT
TCCCTGGGGGTTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCGACATTATTGTCCAATCTTTAA

mRNA sequence

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AAAAAAATGAGGTGAGCTATGCTGAACTTAGCTTAAATAAATGTAAGTTATAATTGTTGAATAATTTGGGGGTGAATTGGTTGATGATCCAATATTTATACAAACAAAAT
TTAAAATCACGACCAGAAAATCTTGGGTCATTTCGGACAAGTAATCTCCCTACGAATGAGTGCGAGCATTCTCGTAGCTGAAGCGGTGTGGAAGCAGATCGAGTCGACTC
GATCAGTGACTGATGATCAGCTTTCAGTCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTAGATCAAAGAGGGGTGAAGAAAATTTATGGGGAG
CCAAGCAGTCGTTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTTCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGT
GAACAGAGGAGAACAACTTTGTTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCCCTGGGGGTTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCGACATTAT
TGTCCAATCTTTAAGACTTTAGCAACTTTATCAGAGCCAAAGCTCTCAGCATTCAGAGTTTGAGAGCTTTGCTCCTCTATACTTGGGGTCACCCTTGCCCGTCCCAAGAG
CCGGATGGAGACATCAAGGGTTTTTATTTATTAAGCTCACCCGAGGGGTCAAACCTGAGACCTCTAAGCCGGTATGATCAGGAGACTTCCAAGCTCTTACCAATGGAGCG
GCCCCTTCGGGGCAATGGAACTTGCATAATTATAAATATTACAGCATACTACGTGTTTCCTTGTCAACTAAATGTTAGTAGGGTTAGACGGTTGTCCGGTGAGATTAGTC
GAGGTGCGCAAGCTAGCCCGAACACTCATCGATATCAAAATAATAATAATAAATAAATAATAACCATTACAACATACTAGGTTTCCTTAGTGAGCTGGTAGCTCTAACTT
GTTTTCACTCACTAATATGTACTGTATTCATCTCATTAACTTATGACAACCAACCCTGCAGTATCCTGAAATCTAACACCTCTCCTCTTCCTCATTCCTCCTACTATGTT
TGCTTTTCCGTCTCATGATTCTTTCTTTTTTCTTCCGGATCCTGAATATTTGAGGGGAAACCATGAAACATGGAGTAGAAAACTCTAAGTAGTACTTATAAAAGGTTCCA
TCTTCCACTTGCAGATTGCAAATTTTTGGTGATGTACAACTGAAAATGTACATTTTTCCATCCTTCCATTTGAGATTGAACCGATTTTATAAGATTTGGATGAATCTTGT
TAGAAAATCGATATTTTAGTAAGATCTTACATTGTAGTTAAATGAACTGGGTATCTTCTACCGTATATTGTTGCATTGCTGTGATAGTAGTAGAAGATAGGGACGGCAAC
TTTATCGGCCTACTTGTATAGTTGTATATTTGATTTTAATGATCAAGAGATATCTATCAGAGTGTTCCATTAGCTGCATAAACTCTTTTTTGTTATAGTTCAAGAATTCT
ATCTATTTTGATTTACTTCATTCATAACGTTGTATACATATTATAGGTTTTGTATTTGTAGTATAAGTCTTTACTTTCCTTCGGGTGTACTGGGCTTCTTCTTTTGTAGA
CACCCGTATTCTTTATTCTTTTATGACAGCCTAGTTATTTTAAAAAGTTATACATAACGTTGTAAGTTTCTGTTGAGGTTAATCATTGATGTACGTGAATATTATAGTTA
TTAATGATTGTGTTTCATTTATACAAGGTATATCATTGATGTATATATCTATTAACATGCTTGCATATTATAACCATAGTCTAAAACATGCTTCCATATTAAGTTTTCAT
GATAGAGGGATATTGACCCATGGATGTCAATTATTATTCTAGAACCCTGGCA

Protein sequence

Show/hide protein sequence

MSASILVAEAVWKQIESTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSSRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAA
SLGVCIEVKVSDEELATLLSNL

Tan0003926 (gene) of Snake gourd v1 genome