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Tan0003937 (gene) of Snake gourd v1 genome

Gene IDTan0003937
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransposase
Genome locationLG10:22269718..22275676
RNA-Seq ExpressionTan0003937
SyntenyTan0003937
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451868.1 PREDICTED: uncharacterized protein LOC103493028 isoform X1 [Cucumis melo]5.3e-3550.29Show/hide
Query:  GTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVEN------------VASPTKHKSDV-----------------------------TVHVPTSHS
        G PCHLAIGS DNVVA G M+ SD Q PT+HG+PLG EN            VA P   K D+                             T    T+ S
Subjt:  GTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVEN------------VASPTKHKSDV-----------------------------TVHVPTSHS

Query:  TKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
        +KYTD HVTIKLLNRYAM +M+ +D IQ+ LS+H+FG+EK IYL RDDI+ YCGM EIGYSCI+ YIA LW
Subjt:  TKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

XP_022136076.1 uncharacterized protein LOC111007859 isoform X1 [Momordica charantia]1.6e-3634.12Show/hide
Query:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------
        +L+ DPS RAILW  ARKGKNNEYFD+ T++CA RI +   +                                                          
Subjt:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------

Query:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------
                                 G PCHLA+ S DN+VA GT++ ++ Q PTVHGVPLGV+NV                                   
Subjt:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------

Query:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
               S  K+ S        +  +K+TD HV+IKLLNRY MLSM+ +DT+++ LSK +FG+EK IYL R+DI+ YC M+EIGYSCI+ YIAYLW
Subjt:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

XP_022136077.1 uncharacterized protein LOC111007859 isoform X2 [Momordica charantia]1.6e-3634.12Show/hide
Query:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------
        +L+ DPS RAILW  ARKGKNNEYFD+ T++CA RI +   +                                                          
Subjt:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------

Query:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------
                                 G PCHLA+ S DN+VA GT++ ++ Q PTVHGVPLGV+NV                                   
Subjt:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------

Query:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
               S  K+ S        +  +K+TD HV+IKLLNRY MLSM+ +DT+++ LSK +FG+EK IYL R+DI+ YC M+EIGYSCI+ YIAYLW
Subjt:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

XP_022136079.1 uncharacterized protein LOC111007859 isoform X3 [Momordica charantia]1.6e-3634.12Show/hide
Query:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------
        +L+ DPS RAILW  ARKGKNNEYFD+ T++CA RI +   +                                                          
Subjt:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------

Query:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------
                                 G PCHLA+ S DN+VA GT++ ++ Q PTVHGVPLGV+NV                                   
Subjt:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------

Query:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
               S  K+ S        +  +K+TD HV+IKLLNRY MLSM+ +DT+++ LSK +FG+EK IYL R+DI+ YC M+EIGYSCI+ YIAYLW
Subjt:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

XP_022136080.1 uncharacterized protein LOC111007859 isoform X4 [Momordica charantia]1.6e-3634.12Show/hide
Query:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------
        +L+ DPS RAILW  ARKGKNNEYFD+ T++CA RI +   +                                                          
Subjt:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------

Query:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------
                                 G PCHLA+ S DN+VA GT++ ++ Q PTVHGVPLGV+NV                                   
Subjt:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------

Query:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
               S  K+ S        +  +K+TD HV+IKLLNRY MLSM+ +DT+++ LSK +FG+EK IYL R+DI+ YC M+EIGYSCI+ YIAYLW
Subjt:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

TrEMBL top hitse value%identityAlignment
A0A1S3BRX5 uncharacterized protein LOC103493028 isoform X12.6e-3550.29Show/hide
Query:  GTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVEN------------VASPTKHKSDV-----------------------------TVHVPTSHS
        G PCHLAIGS DNVVA G M+ SD Q PT+HG+PLG EN            VA P   K D+                             T    T+ S
Subjt:  GTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVEN------------VASPTKHKSDV-----------------------------TVHVPTSHS

Query:  TKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
        +KYTD HVTIKLLNRYAM +M+ +D IQ+ LS+H+FG+EK IYL RDDI+ YCGM EIGYSCI+ YIA LW
Subjt:  TKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

A0A6J1C2H7 uncharacterized protein LOC111007859 isoform X18.0e-3734.12Show/hide
Query:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------
        +L+ DPS RAILW  ARKGKNNEYFD+ T++CA RI +   +                                                          
Subjt:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------

Query:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------
                                 G PCHLA+ S DN+VA GT++ ++ Q PTVHGVPLGV+NV                                   
Subjt:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------

Query:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
               S  K+ S        +  +K+TD HV+IKLLNRY MLSM+ +DT+++ LSK +FG+EK IYL R+DI+ YC M+EIGYSCI+ YIAYLW
Subjt:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

A0A6J1C2V2 uncharacterized protein LOC111007859 isoform X48.0e-3734.12Show/hide
Query:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------
        +L+ DPS RAILW  ARKGKNNEYFD+ T++CA RI +   +                                                          
Subjt:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------

Query:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------
                                 G PCHLA+ S DN+VA GT++ ++ Q PTVHGVPLGV+NV                                   
Subjt:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------

Query:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
               S  K+ S        +  +K+TD HV+IKLLNRY MLSM+ +DT+++ LSK +FG+EK IYL R+DI+ YC M+EIGYSCI+ YIAYLW
Subjt:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

A0A6J1C398 uncharacterized protein LOC111007859 isoform X38.0e-3734.12Show/hide
Query:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------
        +L+ DPS RAILW  ARKGKNNEYFD+ T++CA RI +   +                                                          
Subjt:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------

Query:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------
                                 G PCHLA+ S DN+VA GT++ ++ Q PTVHGVPLGV+NV                                   
Subjt:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------

Query:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
               S  K+ S        +  +K+TD HV+IKLLNRY MLSM+ +DT+++ LSK +FG+EK IYL R+DI+ YC M+EIGYSCI+ YIAYLW
Subjt:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

A0A6J1C4J7 uncharacterized protein LOC111007859 isoform X28.0e-3734.12Show/hide
Query:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------
        +L+ DPS RAILW  ARKGKNNEYFD+ T++CA RI +   +                                                          
Subjt:  ELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMV----------------------------------------------------------

Query:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------
                                 G PCHLA+ S DN+VA GT++ ++ Q PTVHGVPLGV+NV                                   
Subjt:  ----------------------SFNGTPCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENV-----------------------------------

Query:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW
               S  K+ S        +  +K+TD HV+IKLLNRY MLSM+ +DT+++ LSK +FG+EK IYL R+DI+ YC M+EIGYSCI+ YIAYLW
Subjt:  ------ASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYCGMVEIGYSCIVAYIAYLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGATCAAGTGACGATGAAGTGAACGTATCGATCCAAATGGAGGCTAGGCATACTAATCGACGTGGTCTCACTACTATGCGTGGTCGGGCACGCGTAAGGACTGG
AGAACGCTTAGTCATCCAATATAACAATCAAGGCCAGAGTGTCGGTGATAATGCAAACCAAATGCAAAGTTATATTGGAGAATTGGCGGAAGATCCTTCCACTCGTGCCA
TCTTATGGATACATGCACGAAAAGGAAAAAATAATGAATACTTCGATGAAGATACCAAACAATGTGCTGGTCGAATCTTTAAATATCTTATGGTTAGTTTCAATGGAACT
CCATGCCATCTAGCAATAGGATCAAAGGATAATGTGGTTGCTGCAGGAACAATGTACACGTCTGACGCTCAATTTCCCACAGTCCATGGAGTTCCCTTAGGAGTTGAAAA
TGTGGCTTCTCCAACAAAACATAAGTCAGATGTTACTGTACATGTGCCTACTTCACATTCTACAAAGTACACAGATGCTCATGTGACTATTAAACTTCTGAATCGTTATG
CAATGTTATCGATGCGAGAAGATGATACGATTCAAGTCAAGTTGAGTAAGCACATGTTCGGGGAGGAAAAGTTAATTTATTTACATCGCGATGATATCCTGCATTACTGT
GGAATGGTGGAGATAGGGTACTCCTGCATAGTCGCATACATTGCGTATCTTTGGACTCACCACCGATCCTCTAATGAACAACAAGTCTATGGTCCTACCATAAACTCAAA
CCCTCTTAAACTAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGATCAAGTGACGATGAAGTGAACGTATCGATCCAAATGGAGGCTAGGCATACTAATCGACGTGGTCTCACTACTATGCGTGGTCGGGCACGCGTAAGGACTGG
AGAACGCTTAGTCATCCAATATAACAATCAAGGCCAGAGTGTCGGTGATAATGCAAACCAAATGCAAAGTTATATTGGAGAATTGGCGGAAGATCCTTCCACTCGTGCCA
TCTTATGGATACATGCACGAAAAGGAAAAAATAATGAATACTTCGATGAAGATACCAAACAATGTGCTGGTCGAATCTTTAAATATCTTATGGTTAGTTTCAATGGAACT
CCATGCCATCTAGCAATAGGATCAAAGGATAATGTGGTTGCTGCAGGAACAATGTACACGTCTGACGCTCAATTTCCCACAGTCCATGGAGTTCCCTTAGGAGTTGAAAA
TGTGGCTTCTCCAACAAAACATAAGTCAGATGTTACTGTACATGTGCCTACTTCACATTCTACAAAGTACACAGATGCTCATGTGACTATTAAACTTCTGAATCGTTATG
CAATGTTATCGATGCGAGAAGATGATACGATTCAAGTCAAGTTGAGTAAGCACATGTTCGGGGAGGAAAAGTTAATTTATTTACATCGCGATGATATCCTGCATTACTGT
GGAATGGTGGAGATAGGGTACTCCTGCATAGTCGCATACATTGCGTATCTTTGGACTCACCACCGATCCTCTAATGAACAACAAGTCTATGGTCCTACCATAAACTCAAA
CCCTCTTAAACTAGTTTAG
Protein sequenceShow/hide protein sequence
MGGSSDDEVNVSIQMEARHTNRRGLTTMRGRARVRTGERLVIQYNNQGQSVGDNANQMQSYIGELAEDPSTRAILWIHARKGKNNEYFDEDTKQCAGRIFKYLMVSFNGT
PCHLAIGSKDNVVAAGTMYTSDAQFPTVHGVPLGVENVASPTKHKSDVTVHVPTSHSTKYTDAHVTIKLLNRYAMLSMREDDTIQVKLSKHMFGEEKLIYLHRDDILHYC
GMVEIGYSCIVAYIAYLWTHHRSSNEQQVYGPTINSNPLKLV