; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0003939 (gene) of Snake gourd v1 genome

Gene IDTan0003939
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFlap endonuclease 1
Genome locationLG09:1250852..1260832
RNA-Seq ExpressionTan0003939
SyntenyTan0003939
Gene Ontology termsGO:0006284 - base-excision repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0005739 - mitochondrion (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0008409 - 5'-3' exonuclease activity (molecular function)
GO:0017108 - 5'-flap endonuclease activity (molecular function)
InterPro domainsIPR006084 - XPG/Rad2 endonuclease
IPR008918 - Helix-hairpin-helix motif, class 2
IPR036279 - 5'-3' exonuclease, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159613.1 flap endonuclease 1 isoform X1 [Momordica charantia]2.3e-10778.71Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEELNL+MDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIE ILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+DWPYQEARQLFKEPL CTDEEQLDIKWTTPDEEGL+TFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
         IKRKV KCV+RSPKPGVQ KYSPQAFYSSRTKVIGSLGM ML+ SSKYS SGPLV+AVCFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

XP_022931724.1 flap endonuclease 1 isoform X1 [Cucurbita moschata]3.1e-10777.57Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+ WP+QEARQLFKEPL CTDEEQLDIKWTTPDEEGLI+FLVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
        S KRKV KCVL+SPKPG+QHKYSPQAFY SRTKVIGSLG P+LDHSSKYS S PLV+A CFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

XP_022969705.1 flap endonuclease 1 isoform X1 [Cucurbita maxima]2.0e-10676.81Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEV+KILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+DWP+QEARQLFKEPL CTDEEQLDIKWTTPDEEGLI+ LVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
        S KRKV KCVL+SPKPG+QHKYSPQAFY SRTKVIGSLG P++DHS KYS S PLV+AVCFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

XP_023531871.1 flap endonuclease 1 isoform X1 [Cucurbita pepo subsp. pepo]4.0e-10777.57Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIE+ILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+ WP+QEARQLFKEPL CTDEEQLDIKWTTPDEEGLI+FLVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
        S KRKV KCVL+SPKPG+QHKYSPQAFY SRTKVIGSLG P+LDHSSKYS S PLV+AVCFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

XP_038879461.1 flap endonuclease 1 isoform X1 [Benincasa hispida]1.5e-10978.71Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEELNLTMDQF+DLCILSGCDYCD+IRGIGGQTALKLIRQHGSIE ILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIPDDWPYQEARQLFKEPL CTDEEQLDIKWTTPDEEGL+ FLVNENGFNS+RVTKAVEKIKAAKNKSSQGR+ESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
        SIKRKVNKCVLRSPKPG QHK+SPQAFYSSRTK IGSLGM MLDHSSKYS SGPLV+AVCFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

TrEMBL top hitse value%identityAlignment
A0A1S3BPA7 Flap endonuclease 12.2e-10375.67Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEELNLTMDQF+DLCILSGCDYCD+IRGIGG TALKLIRQHG+IE ILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIPDDWPY+EARQLFKEPL CTDEEQLDIKWTTPDEEGL+TFLVNENGFNS+RVTKAVEKIKAAKNKSSQGR+ESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
        SIKRKVNK VLR PKPG QHK+S QAF  SR+KVIGSLGM MLDHSSKYS SGPLV+A CFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

A0A1S3BQ01 Flap endonuclease 12.2e-10375.67Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEELNLTMDQF+DLCILSGCDYCD+IRGIGG TALKLIRQHG+IE ILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIPDDWPY+EARQLFKEPL CTDEEQLDIKWTTPDEEGL+TFLVNENGFNS+RVTKAVEKIKAAKNKSSQGR+ESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
        SIKRKVNK VLR PKPG QHK+S QAF  SR+KVIGSLGM MLDHSSKYS SGPLV+A CFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

A0A6J1DZA7 Flap endonuclease 11.1e-10778.71Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEELNL+MDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIE ILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+DWPYQEARQLFKEPL CTDEEQLDIKWTTPDEEGL+TFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
         IKRKV KCV+RSPKPGVQ KYSPQAFYSSRTKVIGSLGM ML+ SSKYS SGPLV+AVCFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

A0A6J1EV18 Flap endonuclease 11.5e-10777.57Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+ WP+QEARQLFKEPL CTDEEQLDIKWTTPDEEGLI+FLVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
        S KRKV KCVL+SPKPG+QHKYSPQAFY SRTKVIGSLG P+LDHSSKYS S PLV+A CFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

A0A6J1I0P7 Flap endonuclease 19.6e-10776.81Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEV+KILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+DWP+QEARQLFKEPL CTDEEQLDIKWTTPDEEGLI+ LVNENGFNSDRVTKAVEKIKAAKNKSSQGR+ESFFKPVTNPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT
        S KRKV KCVL+SPKPG+QHKYSPQAFY SRTKVIGSLG P++DHS KYS S PLV+AVCFGT
Subjt:  SIKRKVNKCVLRSPKPGVQHKYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT

SwissProt top hitse value%identityAlignment
B8AW67 Flap endonuclease 1-A2.3e-6564.39Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSS+KIPVMEFEVAK+LEEL LTMDQF+DLCILSGCDYCDSI+GIGGQTALKLIRQHGSIE+ILENINK+R                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+DWPYQEAR+LFKEP    D  +L  KW  PDEEGL+ FLV ENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV + S 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRK
         +KRK
Subjt:  SIKRK

C5YUK3 Flap endonuclease 1-A3.9e-6563.41Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSS+KIPVMEF+VAK+LEEL LTMDQF+DLCIL GCDYCDSI+GIGGQTALKLIRQHGSIE+ILEN+NK+R                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+DWPYQEAR+LFKEP    D  +L  KWT PDEEGLI+FLV +NGFN DRVTKA+EKIK+AKNKSSQGRLESFFKPV   S 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRK
         +KRK
Subjt:  SIKRK

C6TEX6 Flap endonuclease 11.0e-7369.76Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSS+KIPVMEFEVAKILEELN+TMDQF+DLCILSGCDYCDSIRGIGG TALKLIRQHGSIENI EN+NKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIPD+WPYQEAR+LFKEPL  TDE++LDIKW++PDEEGLITFLVNENGFN DRVTKA+EKIK AKNKSSQGRLESFFKP  NPS 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRK
         IKRK
Subjt:  SIKRK

O65251 Flap endonuclease 19.6e-7268.78Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEEL LTMDQF+DLCILSGCDYCDSIRGIGGQTALKLIRQHGSIE ILEN+NKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP++WPY EAR+LFKEP   TDEEQLDIKWT+PDEEG++ FLVNENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV N S 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRK
          KRK
Subjt:  SIKRK

Q9SXQ6 Flap endonuclease 1-A2.3e-6564.39Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSS+KIPVMEFEVAK+LEEL LTMDQF+DLCILSGCDYCDSI+GIGGQTALKLIRQHGSIE+ILENINK+R                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP+DWPYQEAR+LFKEP    D  +L  KW  PDEEGL+ FLV ENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV + S 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRK
         +KRK
Subjt:  SIKRK

Arabidopsis top hitse value%identityAlignment
AT1G29630.2 5'-3' exonuclease family protein3.0e-0431.25Show/hide
Query:  MEFEVAKILEELNLTMDQF-----VDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENI
        +EF+ +K+ +  +L++  F     +++CILSGCDY  S+ G+G + A  LI +  S + +++++
Subjt:  MEFEVAKILEELNLTMDQF-----VDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENI

AT1G29630.3 5'-3' exonuclease family protein3.0e-0431.25Show/hide
Query:  MEFEVAKILEELNLTMDQF-----VDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENI
        +EF+ +K+ +  +L++  F     +++CILSGCDY  S+ G+G + A  LI +  S + +++++
Subjt:  MEFEVAKILEELNLTMDQF-----VDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENI

AT5G26680.1 5'-3' exonuclease family protein3.1e-7368.6Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEEL LTMDQF+DLCILSGCDYCDSIRGIGGQTALKLIRQHGSIE ILEN+NKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP++WPY EAR+LFKEP   TDEEQLDIKWT+PDEEG++ FLVNENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV N S 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRKVN
          KRK N
Subjt:  SIKRKVN

AT5G26680.2 5'-3' exonuclease family protein6.8e-7368.78Show/hide
Query:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV
        MDPSSRKIPVMEFEVAKILEEL LTMDQF+DLCILSGCDYCDSIRGIGGQTALKLIRQHGSIE ILEN+NKER                           
Subjt:  MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSV

Query:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE
                      YQIP++WPY EAR+LFKEP   TDEEQLDIKWT+PDEEG++ FLVNENGFN DRVTKA+EKIK AKNKSSQGRLESFFKPV N S 
Subjt:  WLWKIENFILEYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSE

Query:  SIKRK
          KRK
Subjt:  SIKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCCAGCTCAAGGAAGATCCCAGTTATGGAATTTGAAGTTGCAAAGATTTTGGAGGAGCTGAACCTTACCATGGATCAATTTGTTGATTTGTGCATTCTTTCTGG
ATGTGATTATTGTGACAGTATCCGAGGTATAGGGGGGCAGACTGCTCTAAAGCTTATCCGTCAACATGGGTCTATAGAAAATATACTAGAGAACATAAATAAAGAGAGAT
TTGACTCTTTGATTAAAGCCAGTGGGTTGCAATTTCATGAGTTGGCACTTGTTCTGTTTGGCTTTGGCACTTGCTCTGTTTGGCTTTGGAAAATTGAAAATTTTATCCTA
GAATACAAGGGATACCAAATTCCAGATGATTGGCCTTATCAAGAGGCCCGGCAGCTTTTTAAAGAACCACTAGCGTGCACTGATGAAGAGCAACTTGACATTAAGTGGAC
TACTCCAGATGAAGAAGGCTTAATAACATTTTTGGTGAATGAGAATGGGTTCAACAGCGATAGAGTGACGAAGGCAGTAGAGAAAATTAAAGCAGCCAAGAACAAGTCAT
CACAGGGCCGGTTGGAGTCATTTTTCAAGCCCGTAACTAATCCTTCAGAATCCATTAAGAGAAAGGTAAACAAATGTGTACTTAGGTCTCCCAAACCAGGAGTCCAGCAT
AAATACTCTCCACAAGCTTTTTATTCGTCAAGGACAAAGGTCATTGGCAGCCTAGGCATGCCAATGTTAGACCATTCTTCCAAGTACTCGGTGTCAGGGCCATTAGTTTT
GGCTGTTTGCTTCGGCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCCAGCTCAAGGAAGATCCCAGTTATGGAATTTGAAGTTGCAAAGATTTTGGAGGAGCTGAACCTTACCATGGATCAATTTGTTGATTTGTGCATTCTTTCTGG
ATGTGATTATTGTGACAGTATCCGAGGTATAGGGGGGCAGACTGCTCTAAAGCTTATCCGTCAACATGGGTCTATAGAAAATATACTAGAGAACATAAATAAAGAGAGAT
TTGACTCTTTGATTAAAGCCAGTGGGTTGCAATTTCATGAGTTGGCACTTGTTCTGTTTGGCTTTGGCACTTGCTCTGTTTGGCTTTGGAAAATTGAAAATTTTATCCTA
GAATACAAGGGATACCAAATTCCAGATGATTGGCCTTATCAAGAGGCCCGGCAGCTTTTTAAAGAACCACTAGCGTGCACTGATGAAGAGCAACTTGACATTAAGTGGAC
TACTCCAGATGAAGAAGGCTTAATAACATTTTTGGTGAATGAGAATGGGTTCAACAGCGATAGAGTGACGAAGGCAGTAGAGAAAATTAAAGCAGCCAAGAACAAGTCAT
CACAGGGCCGGTTGGAGTCATTTTTCAAGCCCGTAACTAATCCTTCAGAATCCATTAAGAGAAAGGTAAACAAATGTGTACTTAGGTCTCCCAAACCAGGAGTCCAGCAT
AAATACTCTCCACAAGCTTTTTATTCGTCAAGGACAAAGGTCATTGGCAGCCTAGGCATGCCAATGTTAGACCATTCTTCCAAGTACTCGGTGTCAGGGCCATTAGTTTT
GGCTGTTTGCTTCGGCACATGAAGCTGAAAACCCTGGTGAAATTTTAGAGTGATTAACTAATCTATCTAATTGAAGTAAGTACACTTAGTGCTTTTGTAGTTGCTTTGGT
TTTCAGAGATGTACTAGAAAATCCTCATCC
Protein sequenceShow/hide protein sequence
MDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERFDSLIKASGLQFHELALVLFGFGTCSVWLWKIENFIL
EYKGYQIPDDWPYQEARQLFKEPLACTDEEQLDIKWTTPDEEGLITFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRLESFFKPVTNPSESIKRKVNKCVLRSPKPGVQH
KYSPQAFYSSRTKVIGSLGMPMLDHSSKYSVSGPLVLAVCFGT