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Tan0003943 (gene) of Snake gourd v1 genome

Gene IDTan0003943
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationLG03:76588969..76592527
RNA-Seq ExpressionTan0003943
SyntenyTan0003943
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145820.1 uncharacterized protein LOC111015181 [Momordica charantia]7.1e-3856.93Show/hide
Query:  HVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNFEVLPPR
        HVV  +DQF F+V+DDNL G V+L   TC CREFDYF+IPCSHAIAA   R+++P +LC +AY   + + AY   I P+GHVS W +S  FVN  V PP+
Subjt:  HVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNFEVLPPR

Query:  QVSRVGRRKTQRIPSRGEVRQVHKCSRCGNLAPVQHL
         V RVGRRKT RIPS GEVRQ  KC RCG     Q++
Subjt:  QVSRVGRRKTQRIPSRGEVRQVHKCSRCGNLAPVQHL

XP_022146373.1 uncharacterized protein LOC111015601 [Momordica charantia]2.1e-3757.78Show/hide
Query:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF
        S+    HVV  +DQF F+V DDNL G V+L   TC+CREFDYF+IPCSHAIAA   R+++P +LC +AY     + AY   I P+GHVS W +S  FVN 
Subjt:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF

Query:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG
         V PP+ V RVGRRKT RIPS GEVRQ  KC RCG
Subjt:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG

XP_022154610.1 uncharacterized protein LOC111021833 [Momordica charantia]3.9e-3655.56Show/hide
Query:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF
        S+    HVV  +DQF F+V D N  G V+L   TC+CREFDYF+IPCSH IAA M R+++P +LC +AY   + + AY   I P+GHVS W +S  FVN 
Subjt:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF

Query:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG
         V PP+ V RVGRR T RIPS GEVRQ  KC RCG
Subjt:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG

XP_022156977.1 uncharacterized protein LOC111023804 [Momordica charantia]1.0e-3656.3Show/hide
Query:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF
        S+    H+V  +DQF F+V DDNL G V+L   TC+C EFDYF+IPCSHAIAA   R+++P +LC +AY   + + AY   I P+GHVS W +S  FVN 
Subjt:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF

Query:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG
         V PP+ V RVGRRKT RIPS GEVRQ  KC RCG
Subjt:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]5.1e-3655.56Show/hide
Query:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF
        S+    HVV  +DQF F+V D NL G V+L    C+CREFDYF+IPCSHAIAA   R+++P +LC +AY   + + AY   I P+GH+S W +S  FVN 
Subjt:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF

Query:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG
         V PP+ V RVGRRKT RIPS GEVRQ  KC RCG
Subjt:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG

TrEMBL top hitse value%identityAlignment
A0A6J1CVL4 uncharacterized protein LOC1110151813.4e-3856.93Show/hide
Query:  HVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNFEVLPPR
        HVV  +DQF F+V+DDNL G V+L   TC CREFDYF+IPCSHAIAA   R+++P +LC +AY   + + AY   I P+GHVS W +S  FVN  V PP+
Subjt:  HVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNFEVLPPR

Query:  QVSRVGRRKTQRIPSRGEVRQVHKCSRCGNLAPVQHL
         V RVGRRKT RIPS GEVRQ  KC RCG     Q++
Subjt:  QVSRVGRRKTQRIPSRGEVRQVHKCSRCGNLAPVQHL

A0A6J1CYE7 uncharacterized protein LOC1110156011.0e-3757.78Show/hide
Query:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF
        S+    HVV  +DQF F+V DDNL G V+L   TC+CREFDYF+IPCSHAIAA   R+++P +LC +AY     + AY   I P+GHVS W +S  FVN 
Subjt:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF

Query:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG
         V PP+ V RVGRRKT RIPS GEVRQ  KC RCG
Subjt:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG

A0A6J1DK35 uncharacterized protein LOC1110218331.9e-3655.56Show/hide
Query:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF
        S+    HVV  +DQF F+V D N  G V+L   TC+CREFDYF+IPCSH IAA M R+++P +LC +AY   + + AY   I P+GHVS W +S  FVN 
Subjt:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF

Query:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG
         V PP+ V RVGRR T RIPS GEVRQ  KC RCG
Subjt:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG

A0A6J1DTD4 uncharacterized protein LOC1110238045.0e-3756.3Show/hide
Query:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF
        S+    H+V  +DQF F+V DDNL G V+L   TC+C EFDYF+IPCSHAIAA   R+++P +LC +AY   + + AY   I P+GHVS W +S  FVN 
Subjt:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF

Query:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG
         V PP+ V RVGRRKT RIPS GEVRQ  KC RCG
Subjt:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG

A0A6J1DYC4 uncharacterized protein LOC1110256782.5e-3655.56Show/hide
Query:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF
        S+    HVV  +DQF F+V D NL G V+L    C+CREFDYF+IPCSHAIAA   R+++P +LC +AY   + + AY   I P+GH+S W +S  FVN 
Subjt:  SEQGIAHVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF

Query:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG
         V PP+ V RVGRRKT RIPS GEVRQ  KC RCG
Subjt:  EVLPPRQVSRVGRRKTQRIPSRGEVRQVHKCSRCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase1.6e-0832.32Show/hide
Query:  DDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF--EVL--PPRQVSRVGRRK
        +D+  G V L   TCTC EF   + PC HA+A C    ++PL    D Y V+     Y     P+  +S W  +         V+  PP +VS  G+ K
Subjt:  DDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNF--EVL--PPRQVSRVGRRK

AT1G64255.1 MuDR family transposase8.2e-0828.43Show/hide
Query:  AHVVKPVDQFEFEVEDDNLGGR--VNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNFEVL
        +++V P+D   F+V      G   V L   +CTC +F  ++ PC HA+A C     +PL    D Y ++ L   Y  +   +  +S W  ++      +L
Subjt:  AHVVKPVDQFEFEVEDDNLGGR--VNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNFEVL

Query:  PP
        PP
Subjt:  PP

AT1G64260.1 MuDR family transposase1.8e-0726.67Show/hide
Query:  IAHVVKPVDQFEFEVEDDNLGGR--VNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNFEV
        I +V+  +++  F+V + +      V L   TCTCR+F  ++ PC HA+A      ++PL    + Y V+     Y     P+  V+ W          +
Subjt:  IAHVVKPVDQFEFEVEDDNLGGR--VNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNFEV

Query:  LPPRQ
         PP Q
Subjt:  LPPRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACATGTTTGGGTTTGTTTTGGTGGTGTATGGAATGAAAGGGAAAAAAATTACGATGTTGGAGAAGTGAGAGGTTTGGATGTAGATATTGATATAGGGTTTGATGA
TTTCATAGGGAAAGTATATGAATTAAGCGGCATAGACCTTAATGGATTCAAACTTATTATACGATGTTTACTGCAACTGAGGTCTAAAGCTCCTGCATTTGTCATTAGAA
ATGATGCAGACTTAAAAAAGGAAGACGATGATGACGATTGGGAAGCAGAGAATGATGATTGGGAAGAAGAAGGTGATGAGGAAAGTGTAGAAAGTGAGCAGGGTATAGCG
CATGTAGTTAAGCCAGTTGATCAATTTGAATTTGAGGTTGAGGACGACAATTTGGGTGGGCGTGTAAACCTTCAAAGAAGAACGTGCACGTGTCGCGAATTTGACTACTT
TGAAATTCCATGCTCACATGCAATTGCTGCATGCATGTTCAGAAGTGTCGACCCATTGACCCTATGCTCTGACGCATACCATGTTCAGGCTCTTTTGAATGCATACGGAG
GTCTCATACATCCACTTGGGCACGTGTCAGAATGGAAAACATCGGCAAATTTTGTAAATTTTGAAGTATTACCACCTAGACAAGTGTCACGCGTGGGACGTCGCAAAACA
CAACGTATTCCATCAAGAGGTGAAGTACGACAAGTCCACAAGTGTAGTCGGTGTGGTAATTTAGCTCCTGTTCAACATCTGCATCCGACCCGAGTGCGATGTATGAGTCT
GTCACAACCAACTCTCCTACCTCGAAGTCGATGCACAATAATATTCAGTGAGTTCGATACAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACATGTTTGGGTTTGTTTTGGTGGTGTATGGAATGAAAGGGAAAAAAATTACGATGTTGGAGAAGTGAGAGGTTTGGATGTAGATATTGATATAGGGTTTGATGA
TTTCATAGGGAAAGTATATGAATTAAGCGGCATAGACCTTAATGGATTCAAACTTATTATACGATGTTTACTGCAACTGAGGTCTAAAGCTCCTGCATTTGTCATTAGAA
ATGATGCAGACTTAAAAAAGGAAGACGATGATGACGATTGGGAAGCAGAGAATGATGATTGGGAAGAAGAAGGTGATGAGGAAAGTGTAGAAAGTGAGCAGGGTATAGCG
CATGTAGTTAAGCCAGTTGATCAATTTGAATTTGAGGTTGAGGACGACAATTTGGGTGGGCGTGTAAACCTTCAAAGAAGAACGTGCACGTGTCGCGAATTTGACTACTT
TGAAATTCCATGCTCACATGCAATTGCTGCATGCATGTTCAGAAGTGTCGACCCATTGACCCTATGCTCTGACGCATACCATGTTCAGGCTCTTTTGAATGCATACGGAG
GTCTCATACATCCACTTGGGCACGTGTCAGAATGGAAAACATCGGCAAATTTTGTAAATTTTGAAGTATTACCACCTAGACAAGTGTCACGCGTGGGACGTCGCAAAACA
CAACGTATTCCATCAAGAGGTGAAGTACGACAAGTCCACAAGTGTAGTCGGTGTGGTAATTTAGCTCCTGTTCAACATCTGCATCCGACCCGAGTGCGATGTATGAGTCT
GTCACAACCAACTCTCCTACCTCGAAGTCGATGCACAATAATATTCAGTGAGTTCGATACAAGTTGA
Protein sequenceShow/hide protein sequence
MPHVWVCFGGVWNEREKNYDVGEVRGLDVDIDIGFDDFIGKVYELSGIDLNGFKLIIRCLLQLRSKAPAFVIRNDADLKKEDDDDDWEAENDDWEEEGDEESVESEQGIA
HVVKPVDQFEFEVEDDNLGGRVNLQRRTCTCREFDYFEIPCSHAIAACMFRSVDPLTLCSDAYHVQALLNAYGGLIHPLGHVSEWKTSANFVNFEVLPPRQVSRVGRRKT
QRIPSRGEVRQVHKCSRCGNLAPVQHLHPTRVRCMSLSQPTLLPRSRCTIIFSEFDTS