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Tan0003967 (gene) of Snake gourd v1 genome

Gene IDTan0003967
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCyclin-H1-1
Genome locationLG08:5995890..5997488
RNA-Seq ExpressionTan0003967
SyntenyTan0003967
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150791.1 uncharacterized protein LOC111018854 [Momordica charantia]3.2e-3976.42Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA
        MA+FVS++FS+PQ +L+EM  RKL +V  VSSRAITGTASKLVLSCCSNKS+SM W   HPLRVTSR FWG+VSFSSRN VI GYW+GPDVDDGWGY+EA
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA

Query:  FLDRIT
        F+DRIT
Subjt:  FLDRIT

XP_022946526.1 uncharacterized protein LOC111450562 [Cucurbita moschata]1.0e-3775.47Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA
        MASFVSL+FS+PQ + +EMP  KLA+VTVV  RA  GTASK VLSCC+NKSIS NW++CHP+R+TSR FWGIVS SSRN+V+AGYWVGPDVDDGWGY+EA
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA

Query:  FLDRIT
        F+DRIT
Subjt:  FLDRIT

XP_022999037.1 uncharacterized protein LOC111493548 [Cucurbita maxima]4.6e-3875.47Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA
        MASFVSL+FS+PQ + +EMP  KLA+VTVV  RA  GTASK VLSCCSNKSISMNW++C P+R+TSR FWGIVS SSRN+V+AGYWVGPDVDDGWGY+EA
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA

Query:  FLDRIT
         +DRIT
Subjt:  FLDRIT

XP_023545344.1 uncharacterized protein LOC111804783 isoform X1 [Cucurbita pepo subsp. pepo]2.4e-3976.42Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA
        MASFVSL+FS+PQ + +EMP  KLA+VTVV  RA  GTAS  VLSCCSNKSISMNW++CHP+R+TSR FWGIVS SSRN+V+AGYWVGPDVDDGWGY+EA
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA

Query:  FLDRIT
        F+DRIT
Subjt:  FLDRIT

XP_038890542.1 uncharacterized protein LOC120080060 [Benincasa hispida]5.5e-3977.57Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMV-IAGYWVGPDVDDGWGYVE
        MA+FVSL+FS+PQP L+E+P RKL+EVTVVSSRA  GTASKLVLSCCSN SISMNW +CHP+R+T R FWGIVS SSR MV ++GYWVGPDVDDGWGY+E
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMV-IAGYWVGPDVDDGWGYVE

Query:  AFLDRIT
        AF+DRIT
Subjt:  AFLDRIT

TrEMBL top hitse value%identityAlignment
A0A5A7U1B8 Uncharacterized protein2.2e-3371.96Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMV-IAGYWVGPDVDDGWGYVE
        MASFVSL+FS+PQ  L+E+P  KLA+ TVVS RA  GTASKLVL C S KSISMNW++   +R+TSR FWGIVS SSRNMV + GYWVGPDVDDGWGY+E
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMV-IAGYWVGPDVDDGWGYVE

Query:  AFLDRIT
        AF+DRIT
Subjt:  AFLDRIT

A0A5D3CPK7 Uncharacterized protein1.1e-3271.03Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMV-IAGYWVGPDVDDGWGYVE
        MASFVSL+FS+PQ  L+E+P  KLA+ TVVS RA  GTA KLVL C S KSISMNW++   +R+TSR FWGIVS SSRNMV + GYWVGPDVDDGWGY+E
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMV-IAGYWVGPDVDDGWGYVE

Query:  AFLDRIT
        AF+DRIT
Subjt:  AFLDRIT

A0A6J1DCK5 uncharacterized protein LOC1110188541.5e-3976.42Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA
        MA+FVS++FS+PQ +L+EM  RKL +V  VSSRAITGTASKLVLSCCSNKS+SM W   HPLRVTSR FWG+VSFSSRN VI GYW+GPDVDDGWGY+EA
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA

Query:  FLDRIT
        F+DRIT
Subjt:  FLDRIT

A0A6J1G3X3 uncharacterized protein LOC1114505625.0e-3875.47Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA
        MASFVSL+FS+PQ + +EMP  KLA+VTVV  RA  GTASK VLSCC+NKSIS NW++CHP+R+TSR FWGIVS SSRN+V+AGYWVGPDVDDGWGY+EA
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA

Query:  FLDRIT
        F+DRIT
Subjt:  FLDRIT

A0A6J1K9Q0 uncharacterized protein LOC1114935482.2e-3875.47Show/hide
Query:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA
        MASFVSL+FS+PQ + +EMP  KLA+VTVV  RA  GTASK VLSCCSNKSISMNW++C P+R+TSR FWGIVS SSRN+V+AGYWVGPDVDDGWGY+EA
Subjt:  MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEA

Query:  FLDRIT
         +DRIT
Subjt:  FLDRIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTCGTTTCTCTGACCTTCTCCATTCCGCAGCCCCTTCTCGAGGAAATGCCACAACGGAAACTGGCCGAAGTTACAGTAGTGTCAAGCCGAGCAATTACTGG
AACAGCATCGAAGCTTGTGCTATCCTGTTGCTCAAATAAATCCATATCTATGAATTGGGACGATTGTCATCCTTTACGGGTAACTTCAAGATCTTTCTGGGGAATAGTTT
CTTTTAGTTCCAGGAATATGGTAATAGCTGGTTACTGGGTAGGACCTGATGTTGATGACGGTTGGGGATATGTAGAAGCTTTTCTTGATCGGATTACTTAA
mRNA sequenceShow/hide mRNA sequence
GTAGTCTAGAACTTGGAACCGGAAGGGCCGCTCTTCTCGCCCTTTTATAAAAAGCGCGACAGCGAAGCCAAAAAAACTTGGGGTTTTGGAATTCGCAGTTGCTTTCATGG
CGAGCTTCGTTTCTCTGACCTTCTCCATTCCGCAGCCCCTTCTCGAGGAAATGCCACAACGGAAACTGGCCGAAGTTACAGTAGTGTCAAGCCGAGCAATTACTGGAACA
GCATCGAAGCTTGTGCTATCCTGTTGCTCAAATAAATCCATATCTATGAATTGGGACGATTGTCATCCTTTACGGGTAACTTCAAGATCTTTCTGGGGAATAGTTTCTTT
TAGTTCCAGGAATATGGTAATAGCTGGTTACTGGGTAGGACCTGATGTTGATGACGGTTGGGGATATGTAGAAGCTTTTCTTGATCGGATTACTTAACAATTCAAACCTT
TAACTCGATTTCATGATTTTCTTCTACTTACTATGCTCGATCTTTTTCAAATGATTTGATGCAGTAGTCACTTGCTTTCACCCAAAGGTCCAAAACTGCTTCCCTTTTGT
GAAATAAAAATTCGTATCTTGTTTGGTCTGGGAAGATACGTAAGTAAAGTAACTTGATTGCGGAGTGGTTAATCAGAGTTCTAGATTTAGGATTTGATCCTCATTGTCAT
GACACGAGGATGGAACAAAGTATAAAATCTGAAGTCAGCAGAGATTTGTCTCATGCTTTCTGCCGGCTTCTTCATTTTGACACAAGTATTTATCGCCTATCATGAGTTGG
CTTAGTGGTCAAAAAGGTCTTAGAGGAC
Protein sequenceShow/hide protein sequence
MASFVSLTFSIPQPLLEEMPQRKLAEVTVVSSRAITGTASKLVLSCCSNKSISMNWDDCHPLRVTSRSFWGIVSFSSRNMVIAGYWVGPDVDDGWGYVEAFLDRIT