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Tan0003968 (gene) of Snake gourd v1 genome

Gene IDTan0003968
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationLG03:70214159..70215094
RNA-Seq ExpressionTan0003968
SyntenyTan0003968
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB64484.1 hypothetical protein L484_006721 [Morus notabilis]3.4e-2365.93Show/hide
Query:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNG-TINKED-----EGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M+RSKS  G YS+ YGD RFGFEDR KSYSFNG ++  ED       NPE+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+KF  ++YD+
Subjt:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNG-TINKED-----EGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

KAE8647476.1 hypothetical protein Csa_003778 [Cucumis sativus]1.1e-3489.53Show/hide
Query:  MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        MMERSKS  GSYS AYGDVRFGFED PKSYSFNGTI KED  N ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK SHSFYDD
Subjt:  MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

PON52269.1 hypothetical protein TorRG33x02_308860 [Trema orientale]3.1e-2469.23Show/hide
Query:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINK--EDE----GNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        MERSKS  G YS+ YGD RFGFEDR KSYSFNG  ++  +DE    GNPE+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+KF  ++YDD
Subjt:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINK--EDE----GNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

PRQ49076.1 hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis]6.9e-2463.83Show/hide
Query:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKED---------EGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        ME+SKSF G YS AY + RFGFEDRPKSYSFNG ++K +           NPEL+RR+RVA YNMY+MEGK K SLRNSFKWIK KF  +FYD+
Subjt:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKED---------EGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

TYK12983.1 hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa]2.4e-3285.88Show/hide
Query:  MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYD
        MMERSKS  GSYS AYGDVRFGFED PKSYSF+GT+ KED  N ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK SHSFY+
Subjt:  MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYD

TrEMBL top hitse value%identityAlignment
A0A0A0KFC2 Uncharacterized protein5.5e-3589.53Show/hide
Query:  MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        MMERSKS  GSYS AYGDVRFGFED PKSYSFNGTI KED  N ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK SHSFYDD
Subjt:  MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

A0A2P5BU01 Uncharacterized protein1.5e-2469.23Show/hide
Query:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINK--EDE----GNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        MERSKS  G YS+ YGD RFGFEDR KSYSFNG  ++  +DE    GNPE+KRR+RVA YNMY+MEGKLK SLRNSFKWIK+KF  ++YDD
Subjt:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINK--EDE----GNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

A0A2P6RRL4 Uncharacterized protein3.3e-2463.83Show/hide
Query:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKED---------EGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        ME+SKSF G YS AY + RFGFEDRPKSYSFNG ++K +           NPEL+RR+RVA YNMY+MEGK K SLRNSFKWIK KF  +FYD+
Subjt:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKED---------EGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

A0A5D3CM35 Uncharacterized protein1.1e-3285.88Show/hide
Query:  MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYD
        MMERSKS  GSYS AYGDVRFGFED PKSYSF+GT+ KED  N ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK SHSFY+
Subjt:  MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYD

A0A6A1VCF1 Uncharacterized protein1.6e-2368.89Show/hide
Query:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDE-----GNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        ME+SKSF G YS  Y DVR  FEDR KSYSFNG     DE     GNPE+KRR+RVATYNMY+MEGKLK SLRNSFKWIK+KFS +F D+
Subjt:  MERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDE-----GNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19460.1 Protein of unknown function (DUF3511)2.4e-0641.43Show/hide
Query:  SYSNAYGD--VRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK
        SYS +Y D   R   +  PK    + + +     +P+L+R++RV +Y  Y++EGKLK S R SFKWIK+K
Subjt:  SYSNAYGD--VRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK

AT2G47480.1 Protein of unknown function (DUF3511)2.4e-0655.88Show/hide
Query:  ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK
        E+KR++R+A Y  Y++EGK+K +L+N F+WIKNK
Subjt:  ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK

AT3G05725.1 Protein of unknown function (DUF3511)5.6e-0850.98Show/hide
Query:  RPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIK
        RP+  S + T+ K    +PE+KR++RVA Y +YS EGK+K +LR S+KWIK
Subjt:  RPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIK

AT4G09890.1 Protein of unknown function (DUF3511)8.1e-1550.62Show/hide
Query:  MMERSKSFCGSYSNAYGDVRFGF-EDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFS
        MM+ SKS+   YS+++    FG+ ++R  SY+FNG     D   PE+KR++RVA+YN+++ E KLK +L+NSFKWIKNKFS
Subjt:  MMERSKSFCGSYSNAYGDVRFGF-EDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFS

AT5G11970.1 Protein of unknown function (DUF3511)7.3e-0840.54Show/hide
Query:  SYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFY
        SYS +YG       D  K  S           +PEL+R++RVA+Y MY +EGK+K S RNSF+W+K +++   Y
Subjt:  SYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGAGAAGCAAATCATTTTGTGGGTCTTACTCAAATGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAGACCCAAATCATACAGCTTCAATGGGACAATCAA
CAAGGAAGATGAGGGCAATCCAGAGCTCAAGAGGAGACAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGTAAGCTGAAGAAGTCCTTGAGAAACAGCTTCAAGT
GGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA
mRNA sequenceShow/hide mRNA sequence
GTTCCTAGTAGCACATATTTATAGGAGAGAAGACATACTTATGAAACATATCCAAAGTTTTTAATGATGGAGAGAAGCAAATCATTTTGTGGGTCTTACTCAAATGCCTA
TGGAGATGTGAGGTTTGGATTTGAGGACAGACCCAAATCATACAGCTTCAATGGGACAATCAACAAGGAAGATGAGGGCAATCCAGAGCTCAAGAGGAGACAAAGAGTAG
CTACTTACAATATGTATTCAATGGAAGGTAAGCTGAAGAAGTCCTTGAGAAACAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGAGTTGTA
AATTCTCCTTTTGTAAACTATTCTTGTTTCTGTGTGAGACTACAAGCTTATGCACACTTCAATTCTATGGCCATCTCCACATTGATCCCCAAGCATACAACTAAAAAGTC
TTAACATTTGGCCCTACTATATTTGGTTACCACGAAAACTCGTAGAATATTAAATTCTAGGTAGGTGGCCATCATGAATGCAATAAACAGTCAATAGTGAGCATCTAGCA
TGAATGTAGTAAAACAATATGTTATATTACATATATTACCTAGCATGGATGTAGCAAGCTTGGCATAAGGTCATGAGTTAAAAGATATAAATATAACATCATCAAATTTT
AAATGATGTTATGCTTTAGAGACAAGAAAAATAGAAAGCTTTCACAGTCTTTCCATAACATCTCCAGTAGCCATAACAGAGGTTCACATTTGGATGGAATGGATTATCAA
TACAAAGTTTACTGTCTTCTCCTACACTATCAAGTACTGATATCCAATATAGATGCAAGTCTTTATACATCTCTATCATTGGGATTTCAAAAACTTCATCAAAAGCCAAA
CAGAAATAAATAAATAAGTGCATTTTTACTCTTAAAGGAATTCGAACTAGAGTTCT
Protein sequenceShow/hide protein sequence
MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD