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Tan0004000 (gene) of Snake gourd v1 genome

Gene IDTan0004000
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine/threonine-protein phosphatase 7 long form homolog
Genome locationLG09:53378133..53383680
RNA-Seq ExpressionTan0004000
SyntenyTan0004000
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.6e-1971.01Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VLY Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.6e-1971.01Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VLY Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]9.9e-1969.57Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VL+ Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.6e-1971.01Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VLY Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

XP_008465830.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]2.6e-1971.01Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VLY Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

TrEMBL top hitse value%identityAlignment
A0A1S3CPS3 serine/threonine-protein phosphatase 7 long form homolog1.3e-1971.01Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VLY Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein1.3e-1971.01Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VLY Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein4.8e-1969.57Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VL+ Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.3e-1971.01Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VLY Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein1.3e-1971.01Show/hide
Query:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        RGP+DP VLY Q  HRS+ VW+D+N  E++CRRREAVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  RGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACAAATGTTTAGGATTTGTTTTACACCAAAATCAGTCTACGAATGACGGTGTTGATTATGACCAAGAAGCATGTGGAGGTTTTACGATTAATGTGAACAGTGG
GGTCATATTTGAACAATTTGTTGAGATGGTAGGATTATCACTTGGTGTAGATGTCATCCAATGTATAGATCCTGAGCCTGAATCAGTTGCCCCACCTTGTGACATCGAGG
ACATGGTTATGGATTGGAGAGAGCCAAGTACTCAACAACGATGTGGGTTGTGCAATCAATTGGGTCATAATCGAAGGGGTCCACTTGATCCATCAGTTTTGTATGCACAA
GAAACACATCGATCACAACTTGTTTGGAACGATCAGAACGTAGAAGAGTTACATTGTCGACGTAGGGAAGCAGTTGTATCTCGAACCATCCCACTACATCGACACATACT
CCCTCATTTACGTGCAATAGGGTTGGAAGGGGTGGCCAGATTGGGTTTCATTCAGTTGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACAAATGTTTAGGATTTGTTTTACACCAAAATCAGTCTACGAATGACGGTGTTGATTATGACCAAGAAGCATGTGGAGGTTTTACGATTAATGTGAACAGTGG
GGTCATATTTGAACAATTTGTTGAGATGGTAGGATTATCACTTGGTGTAGATGTCATCCAATGTATAGATCCTGAGCCTGAATCAGTTGCCCCACCTTGTGACATCGAGG
ACATGGTTATGGATTGGAGAGAGCCAAGTACTCAACAACGATGTGGGTTGTGCAATCAATTGGGTCATAATCGAAGGGGTCCACTTGATCCATCAGTTTTGTATGCACAA
GAAACACATCGATCACAACTTGTTTGGAACGATCAGAACGTAGAAGAGTTACATTGTCGACGTAGGGAAGCAGTTGTATCTCGAACCATCCCACTACATCGACACATACT
CCCTCATTTACGTGCAATAGGGTTGGAAGGGGTGGCCAGATTGGGTTTCATTCAGTTGGACTGA
Protein sequenceShow/hide protein sequence
MGDKCLGFVLHQNQSTNDGVDYDQEACGGFTINVNSGVIFEQFVEMVGLSLGVDVIQCIDPEPESVAPPCDIEDMVMDWREPSTQQRCGLCNQLGHNRRGPLDPSVLYAQ
ETHRSQLVWNDQNVEELHCRRREAVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD