; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004008 (gene) of Snake gourd v1 genome

Gene IDTan0004008
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG09:28118573..28118986
RNA-Seq ExpressionTan0004008
SyntenyTan0004008
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]4.3e-3655.47Show/hide
Query:  MDSSSTLALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDF
        M SS  L  S+ L+L   L+  +E ISLLPETTVT +N+    +L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]4.7e-3555.73Show/hide
Query:  LALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR
        L  S+ L+L   L+  +E ISLLPETTVT +N+    +L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0045871.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-2349.64Show/hide
Query:  MDSSSTLALSVLLMLFTC-LNGFEESISLLPETTVTTINKPPTKV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---F
        M SS TLALS LL+LF+C L   + SI + P TTV  +N+    + ++VHC+SK++DLGVHVL     YSF FRPN+ GTTLF CSF W   G H    F
Subjt:  MDSSSTLALSVLLMLFTC-LNGFEESISLLPETTVTTINKPPTKV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---F

Query:  VIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF
         I+D  RDA +CT CRW I+    CL  PK+ G  ++C+
Subjt:  VIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]2.0e-3355.12Show/hide
Query:  VLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDC
        + L+L   L+  +E ISLLPETTV  +N+    +L +HCRSK +DLGV+V+  + SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  VLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]5.2e-3457.02Show/hide
Query:  TCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDCRWEIYR
        T  +G  E ISLLPETTVT +N+    +L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y 
Subjt:  TCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDCRWEIYR

Query:  DGPCLLHPKDTGTYNVCFPWN
         GPCL H + + T   CFPWN
Subjt:  DGPCLLHPKDTGTYNVCFPWN

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog2.5e-3457.02Show/hide
Query:  TCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDCRWEIYR
        T  +G  E ISLLPETTVT +N+    +L +HCRSK +DLGV+V+  + SYSF FRPN+WGTTLF C F WV+G  H F IYDF RD   CT+CRW +Y 
Subjt:  TCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDCRWEIYR

Query:  DGPCLLHPKDTGTYNVCFPWN
         GPCL H + + T   CFPWN
Subjt:  DGPCLLHPKDTGTYNVCFPWN

A0A5A7TWM4 Putative mitochondrial protein9.0e-2449.64Show/hide
Query:  MDSSSTLALSVLLMLFTC-LNGFEESISLLPETTVTTINKPPTKV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---F
        M SS TLALS LL+LF+C L   + SI + P TTV  +N+    + ++VHC+SK++DLGVHVL     YSF FRPN+ GTTLF CSF W   G H    F
Subjt:  MDSSSTLALSVLLMLFTC-LNGFEESISLLPETTVTTINKPPTKV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHN---F

Query:  VIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF
         I+D  RDA +CT CRW I+    CL  PK+ G  ++C+
Subjt:  VIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCF

A0A5A7TXE8 S-protein homolog9.6e-3455.12Show/hide
Query:  VLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDC
        + L+L   L+  +E ISLLPETTV  +N+    +L +HCRSK +DLGV+V+  + SYSF F PN+WGTTLF C F WV+G  H F IYDF RD   CT+C
Subjt:  VLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTGTYNVCFPWN
        RW IY  GPCL H K + T   CFPWN
Subjt:  RWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F817 S-protein homolog2.1e-3655.47Show/hide
Query:  MDSSSTLALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDF
        M SS  L  S+ L+L   L+  +E ISLLPETTVT +N+    +L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF
Subjt:  MDSSSTLALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
         RD   CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

B0F818 S-protein homolog2.3e-3555.73Show/hide
Query:  LALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR
        L  S+ L+L   L+  +E ISLLPETTVT +N+    +L +HCRSK +DLGV+V+  + SYSF FRPNVWGTTLF C F WV+G  H F IYDF RD   
Subjt:  LALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        CT+CRW +Y  GPCL H + + T   CFPWN
Subjt:  CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 22.3e-1642.86Show/hide
Query:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGTYNVCFPWN
        L  HC+SKD+DLG   L    S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+GPC  +  +T  +++C+PWN
Subjt:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGTYNVCFPWN

F4JZG1 S-protein homolog 47.4e-1543.88Show/hide
Query:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        L +HC+S D+DLG+ +L    S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC     D   +N+C+ WN
Subjt:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

O23020 S-protein homolog 51.8e-2146.67Show/hide
Query:  TTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T VT  N      L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

P0DN93 S-protein homolog 295.6e-1531.91Show/hide
Query:  MDSSSTLALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDF
        M +SS + + + ++LF  ++               T N  P   L++ CRSKD+DLG H+L    ++ + FRP+ + TTLF+C F+W       F  Y  
Subjt:  MDSSSTLALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNV----CFPWN
         RD   C  C W I  D  C+     +G +N     C+PWN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTGTYNV----CFPWN

Q9FMQ4 S-protein homolog 31.6e-1743.3Show/hide
Query:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        L++HC+S D+DLG+ +L    S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D   +N+C+ WN
Subjt:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.3e-2246.67Show/hide
Query:  TTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN
        T VT  N      L++HC+SK +DLG+HV+  +  Y F F+PN+W +TLF CSF W +    +F IYD  RD   C DC+WEI  DGPC L     G   
Subjt:  TTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDCRWEIYRDGPCLLHPKDTGTYN

Query:  VCFPW
         CFPW
Subjt:  VCFPW

AT3G16970.1 Plant self-incompatibility protein S1 family1.9e-1841.59Show/hide
Query:  PETTVTTINKPPTKV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDAN----RCTDCRWEIYRDGPCLLHP
        P TTV   N     + L  HC+SK++DLG   +    ++SF FRP+V+G TLF C F+W +   H F IY   RD       C  C W+I +DGPC L+ 
Subjt:  PETTVTTINKPPTKV-LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDAN----RCTDCRWEIYRDGPCLLHP

Query:  KDTGTYNVCFPWN
        K++  ++VC PWN
Subjt:  KDTGTYNVCFPWN

AT4G16195.1 Plant self-incompatibility protein S1 family1.6e-1742.86Show/hide
Query:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGTYNVCFPWN
        L  HC+SKD+DLG   L    S+SF+F    +G TL+ CSF W    +H+F IY  HRD+   N+C    C W+I R+GPC  +  +T  +++C+PWN
Subjt:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTGTYNVCFPWN

AT5G12060.1 Plant self-incompatibility protein S1 family1.1e-1843.3Show/hide
Query:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        L++HC+S D+DLG+ +L    S+SF FR ++ GTTLF C F W  G +  F IYD  RD  R    C +C W+I   GPC+    D   +N+C+ WN
Subjt:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN

AT5G12070.1 Plant self-incompatibility protein S1 family5.2e-1643.88Show/hide
Query:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN
        L +HC+S D+DLG+ +L    S+SF FRP+ V G TLF C F W  G +  F IYD  RD  R    C  C W+I + GPC     D   +N+C+ WN
Subjt:  LSVHCRSKDNDLGVHVLDRETSYSFTFRPN-VWGTTLFSCSFVWVEGGAHNFVIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTGTYNVCFPWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATCGTCAACACTAGCACTTTCTGTCTTGCTAATGTTATTTACATGTCTAAATGGTTTTGAAGAATCAATCTCACTTCTGCCAGAAACTACAGTGACAACGAT
TAATAAACCGCCTACCAAAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCGGGAAACAAGCTACTCTTTTACCTTTAGACCCA
ATGTTTGGGGGACAACGTTGTTTTCTTGTAGTTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGTTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATCGTCAACACTAGCACTTTCTGTCTTGCTAATGTTATTTACATGTCTAAATGGTTTTGAAGAATCAATCTCACTTCTGCCAGAAACTACAGTGACAACGAT
TAATAAACCGCCTACCAAAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCGGGAAACAAGCTACTCTTTTACCTTTAGACCCA
ATGTTTGGGGGACAACGTTGTTTTCTTGTAGTTTTGTATGGGTGGAAGGTGGGGCCCACAACTTCGTTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTGGAACTTATAATGTTTGCTTTCCTTGGAACTAG
Protein sequenceShow/hide protein sequence
MDSSSTLALSVLLMLFTCLNGFEESISLLPETTVTTINKPPTKVLSVHCRSKDNDLGVHVLDRETSYSFTFRPNVWGTTLFSCSFVWVEGGAHNFVIYDFHRDANRCTDC
RWEIYRDGPCLLHPKDTGTYNVCFPWN