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Tan0004019 (gene) of Snake gourd v1 genome

Gene IDTan0004019
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG09:71056034..71056546
RNA-Seq ExpressionTan0004019
SyntenyTan0004019
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53885.1 hypothetical protein Csa_011823 [Cucumis sativus]6.7e-1750Show/hide
Query:  EESKQAISMEDHKNKSNLYDYEELQAIIGHINKATHFSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-----------------DSDRDVKPTKQRGAMV
        EE +     + H   SNLYDY+E +A+IGH+NKATHFSP+VL    SN LINSPFYRQRLN+IYK+S                 + +   + TKQRG M+
Subjt:  EESKQAISMEDHKNKSNLYDYEELQAIIGHINKATHFSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-----------------DSDRDVKPTKQRGAMV

Query:  SNASIGSKLWKKIKQALMRI
        SNAS+  +LWK+IK  LM I
Subjt:  SNASIGSKLWKKIKQALMRI
PON70340.1 hypothetical protein TorRG33x02_257060 [Trema orientale]6.5e-0434.29Show/hide
Query:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKD--------------SDSDRDVKPTKQRGAMVSNASIGSKLWKKIK
        S+LYD  ELQA++  +NKA      FSP  + +      + SPFYR+RLN+IY++              S +  D   T  RGA +    + ++LW+K+K
Subjt:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKD--------------SDSDRDVKPTKQRGAMVSNASIGSKLWKKIK

Query:  QALMR
        + L R
Subjt:  QALMR
TrEMBL top hitse value%identityAlignment
A0A0A0KW83 Uncharacterized protein3.3e-1750Show/hide
Query:  EESKQAISMEDHKNKSNLYDYEELQAIIGHINKATHFSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-----------------DSDRDVKPTKQRGAMV
        EE +     + H   SNLYDY+E +A+IGH+NKATHFSP+VL    SN LINSPFYRQRLN+IYK+S                 + +   + TKQRG M+
Subjt:  EESKQAISMEDHKNKSNLYDYEELQAIIGHINKATHFSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-----------------DSDRDVKPTKQRGAMV

Query:  SNASIGSKLWKKIKQALMRI
        SNAS+  +LWK+IK  LM I
Subjt:  SNASIGSKLWKKIKQALMRI
A0A2P5DAP5 Uncharacterized protein3.2e-0434.29Show/hide
Query:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKD--------------SDSDRDVKPTKQRGAMVSNASIGSKLWKKIK
        S+LYD  ELQA++  +NKA      FSP  + +      + SPFYR+RLN+IY++              S +  D   T  RGA +    + ++LW+K+K
Subjt:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKD--------------SDSDRDVKPTKQRGAMVSNASIGSKLWKKIK

Query:  QALMR
        + L R
Subjt:  QALMR
A0A7J6HC11 Uncharacterized protein7.1e-0436.11Show/hide
Query:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-DSDRDV--------------KPTKQRGAMVSNASIGSKLWKKI
        S LYD  EL A++  +NKA      FSP  + +       NSPFYR+R NQIYK++ +S + +              K    RGA V    + ++LWKK+
Subjt:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-DSDRDV--------------KPTKQRGAMVSNASIGSKLWKKI

Query:  KQALMRIN
        KQ L+  N
Subjt:  KQALMRIN
A0A7J6I7R6 Uncharacterized protein9.2e-0436.11Show/hide
Query:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-DSDRDV--------------KPTKQRGAMVSNASIGSKLWKKI
        S LYD  EL A++  +NKA      FSP  + +       NSPFYR+R NQIYK++ +S + +              K    RGA V    + ++LWKK+
Subjt:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-DSDRDV--------------KPTKQRGAMVSNASIGSKLWKKI

Query:  KQALMRIN
        KQ L+  N
Subjt:  KQALMRIN
A0A803P9L1 Uncharacterized protein7.1e-0436.11Show/hide
Query:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-DSDRDV--------------KPTKQRGAMVSNASIGSKLWKKI
        S LYD  EL A++  +NKA      FSP  + +       NSPFYR+R NQIYK++ +S + +              K    RGA V    + ++LWKK+
Subjt:  SNLYDYEELQAIIGHINKATH----FSPNVLCSSYSNRLINSPFYRQRLNQIYKDS-DSDRDV--------------KPTKQRGAMVSNASIGSKLWKKI

Query:  KQALMRIN
        KQ L+  N
Subjt:  KQALMRIN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACCGCCATTGAAAAGAGTTTTCAAAAGGATCATCAACAAATCCAAAAGAAAACAACCAAAACTTCCATTGCAAAACTTTTTACAATTACAAAAAGAAAGAAT
AGTGACTGAAAAGCTTCACAAATCCAAAAGAAAGCAAGCAATTTCTGGTAAAGAAGAATCAAAGCAAGCCATTTCAATGGAAGATCATAAAAACAAGAGCAATCTGTATG
ATTATGAAGAACTTCAAGCCATAATTGGTCACATCAACAAAGCCACTCATTTCAGTCCCAATGTTTTATGTTCATCATATTCAAACCGTTTGATCAATTCACCATTTTAT
CGCCAACGTTTGAACCAAATTTATAAAGATAGTGATAGTGATAGAGACGTAAAACCCACAAAACAAAGAGGGGCGATGGTTTCAAATGCATCAATTGGTTCGAAGCTATG
GAAGAAAATTAAGCAAGCCCTCATGAGAATTAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACCGCCATTGAAAAGAGTTTTCAAAAGGATCATCAACAAATCCAAAAGAAAACAACCAAAACTTCCATTGCAAAACTTTTTACAATTACAAAAAGAAAGAAT
AGTGACTGAAAAGCTTCACAAATCCAAAAGAAAGCAAGCAATTTCTGGTAAAGAAGAATCAAAGCAAGCCATTTCAATGGAAGATCATAAAAACAAGAGCAATCTGTATG
ATTATGAAGAACTTCAAGCCATAATTGGTCACATCAACAAAGCCACTCATTTCAGTCCCAATGTTTTATGTTCATCATATTCAAACCGTTTGATCAATTCACCATTTTAT
CGCCAACGTTTGAACCAAATTTATAAAGATAGTGATAGTGATAGAGACGTAAAACCCACAAAACAAAGAGGGGCGATGGTTTCAAATGCATCAATTGGTTCGAAGCTATG
GAAGAAAATTAAGCAAGCCCTCATGAGAATTAATTCTTGA
Protein sequenceShow/hide protein sequence
MEEPPLKRVFKRIINKSKRKQPKLPLQNFLQLQKERIVTEKLHKSKRKQAISGKEESKQAISMEDHKNKSNLYDYEELQAIIGHINKATHFSPNVLCSSYSNRLINSPFY
RQRLNQIYKDSDSDRDVKPTKQRGAMVSNASIGSKLWKKIKQALMRINS