; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004114 (gene) of Snake gourd v1 genome

Gene IDTan0004114
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiontrafficking protein particle complex subunit 6B
Genome locationLG09:32602098..32603453
RNA-Seq ExpressionTan0004114
SyntenyTan0004114
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0043087 - regulation of GTPase activity (biological process)
GO:0005801 - cis-Golgi network (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR007194 - Transport protein particle (TRAPP) component
IPR024096 - NO signalling/Golgi transport ligand-binding domain superfamily
IPR037992 - TRAPP complex, Trs33 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023966.1 Trafficking protein particle complex subunit 6B, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6097.46Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+DPPQ ESQ+NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIK
        VSADISNLPACSFVVRIK
Subjt:  VSADISNLPACSFVVRIK
XP_022154611.1 trafficking protein particle complex subunit 6B [Momordica charantia]2.4e-5995.8Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+DP QSESQ+ SADGE+KAAQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIKA
        VSADISNLPACSFVVRIKA
Subjt:  VSADISNLPACSFVVRIKA
XP_022961590.1 trafficking protein particle complex subunit 6B [Cucurbita moschata]1.3e-6097.46Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+DPPQ ESQ+NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIK
        VSADISNLPACSFVVRIK
Subjt:  VSADISNLPACSFVVRIK
XP_023545328.1 trafficking protein particle complex subunit 6B [Cucurbita pepo subsp. pepo]3.7e-6096.61Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+DPPQ ESQ+NSADGENK AQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIK
        VSADISNLPACSFVVRIK
Subjt:  VSADISNLPACSFVVRIK
XP_038878648.1 trafficking protein particle complex subunit 6B [Benincasa hispida]2.4e-5997.48Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+D PQSESQ+NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIKA
        VSADISNLPACSFVVRIKA
Subjt:  VSADISNLPACSFVVRIKA
TrEMBL top hitse value%identityAlignment
A0A1S3BP90 trafficking protein particle complex subunit 6B isoform X22.6e-5996.64Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+D PQ+ESQ+NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIKA
        VSADISNLPACSFVVRIKA
Subjt:  VSADISNLPACSFVVRIKA
A0A5D3CG65 Trafficking protein particle complex subunit 6B isoform X22.6e-5996.64Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+D PQ+ESQ+NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIKA
        VSADISNLPACSFVVRIKA
Subjt:  VSADISNLPACSFVVRIKA
A0A6J1DP88 trafficking protein particle complex subunit 6B1.2e-5995.8Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+DP QSESQ+ SADGE+KAAQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIKA
        VSADISNLPACSFVVRIKA
Subjt:  VSADISNLPACSFVVRIKA
A0A6J1HCN4 trafficking protein particle complex subunit 6B6.1e-6197.46Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+DPPQ ESQ+NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIK
        VSADISNLPACSFVVRIK
Subjt:  VSADISNLPACSFVVRIK
A0A6J1I0Q5 trafficking protein particle complex subunit 6B6.1e-6197.46Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMS+DPPQ ESQ+NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIK
        VSADISNLPACSFVVRIK
Subjt:  VSADISNLPACSFVVRIK
SwissProt top hitse value%identityAlignment
F1QMV3 Trafficking protein particle complex subunit 6b1.4e-2547.86Show/hide
Query:  ERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAV
        + PRF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT++S      E                   L F CG++RGALSN+G+   V
Subjt:  ERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAV

Query:  SADISNLPACSFVVRIK
        +A++S +PAC F V I+
Subjt:  SADISNLPACSFVVRIK
Q32L78 Trafficking protein particle complex subunit 6B4.7e-2651.75Show/hide
Query:  RFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSAD
        RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS      E                S +L F CG+IRG LSNLGI   V+A+
Subjt:  RFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSAD

Query:  ISNLPACSFVVRIK
        +S++PAC F V I+
Subjt:  ISNLPACSFVVRIK
Q78XR0 Trafficking protein particle complex subunit 6A3.3e-1939.83Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA
        +E P F + L+A+KF+C+D W+ +F+K +D L+TNH+GT+VLQDN F  L  M   P   E                   L F CG++ GAL  LG    
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA

Query:  VSADISNLPACSFVVRIK
        V+A +++LPAC F V I+
Subjt:  VSADISNLPACSFVVRIK
Q86SZ2 Trafficking protein particle complex subunit 6B4.7e-2651.75Show/hide
Query:  RFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSAD
        RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS      E                S +L F CG+IRG LSNLGI   V+A+
Subjt:  RFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSAD

Query:  ISNLPACSFVVRIK
        +S++PAC F V I+
Subjt:  ISNLPACSFVVRIK
Q9D289 Trafficking protein particle complex subunit 6B5.2e-2550Show/hide
Query:  RFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSAD
        RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR L ++S      E                S +L F CG+IRG LSNLGI   V+A+
Subjt:  RFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSAD

Query:  ISNLPACSFVVRIK
        +S++PAC F V I+
Subjt:  ISNLPACSFVVRIK
Arabidopsis top hitse value%identityAlignment
AT3G05000.1 Transport protein particle (TRAPP) component1.9e-5481.67Show/hide
Query:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDP-PQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPC
        MERPRF+DHLEAIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDN+FRWL+R+SIDP  ++E+Q+ S  GE+KAAQA SM+LYFPCGIIRG LSNLGIPC
Subjt:  MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDP-PQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPC

Query:  AVSADISNLPACSFVVRIKA
        AVSADIS+LP CSFV+R+KA
Subjt:  AVSADISNLPACSFVVRIKA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGGCCTCGGTTCACTGATCATCTTGAGGCAATCAAATTTATCTGCAAGGACTTCTGGTCTGAACTCTTCAAAAAGCAGATAGACAACTTGAAAACAAATCATAG
AGGCACCTTTGTTTTGCAAGATAATCGATTTCGCTGGCTTACACGTATGTCGATCGATCCTCCGCAAAGTGAATCACAGGAAAATTCTGCAGATGGTGAAAACAAGGCAG
CTCAGGCGACAAGTATGCATCTATATTTCCCATGCGGAATCATAAGGGGCGCTCTCTCAAATTTGGGAATTCCTTGTGCAGTTTCTGCTGATATTTCAAATCTTCCTGCA
TGTTCATTTGTTGTTCGTATAAAGGCCTGA
mRNA sequenceShow/hide mRNA sequence
GGGGAACTCTCTGATCTTTCCCAAGTGATGGTTTAGCTTGTATTTGATTTCAGATTAAATTTTCTGCCTAGAGTCTATGTATTATGGGTTAGCTTAATACCGGTCTTAGC
TTCCATTTTTCCTTGCCCATTTATTGACTTTTTTTTTTTTCATGCTAATTGATGATTAAATACTGCAACTTAACTATTATGCTCTGTTCTCATTAGGTATACAATGGAGC
GGCCTCGGTTCACTGATCATCTTGAGGCAATCAAATTTATCTGCAAGGACTTCTGGTCTGAACTCTTCAAAAAGCAGATAGACAACTTGAAAACAAATCATAGAGGCACC
TTTGTTTTGCAAGATAATCGATTTCGCTGGCTTACACGTATGTCGATCGATCCTCCGCAAAGTGAATCACAGGAAAATTCTGCAGATGGTGAAAACAAGGCAGCTCAGGC
GACAAGTATGCATCTATATTTCCCATGCGGAATCATAAGGGGCGCTCTCTCAAATTTGGGAATTCCTTGTGCAGTTTCTGCTGATATTTCAAATCTTCCTGCATGTTCAT
TTGTTGTTCGTATAAAGGCCTGACGAGAAGTGTATCAAAAAGTAGATTTTATCTCTGTGGGTTATGAAGATGCGCTAGGTCCTCACCACTCTCTCCAGTTGTAATGGTTC
CTTTCTTTCTTCTTTTTTGTTTATTTTTTGCCATCTCTGTCTCTTTCTCCTCTCCTAAGCCATTGAAACTTTGAGCACAAAAATCTGTCGGACAAACGTTTGTGTATGCA
TGAAAGTCAATATCAGTTATTTTTCAGATTTTTTTTTTTTTTTTTGAGTACATCAACAATTGGGGTGGGGGGCTTCGAACTCATGACCTCTTGGTCATGAGTCATACTTG
ATGTTAGTTGAGCTATGTTCTTGTTGACCTATTTTTCAGAATTTAGAGATTGTAGACATATGTTAAGACTTATTATATTGTACTTTTTAGGAGAATGAATTCATATCCCA
TGATGGTCACGTATGTAGGAGGTTAAAATCTTATTGAGTTTCTACCTAACTAAATATTGTAGAGTCAAATAGCTCATGAGATTAGTAGACCTATGTAATAAGCATAATGA
AATACTTATAGATATTTAAAAAGGCTATATTGTGTACATTTTTAACCATACAGTAAGAAGGCGA
Protein sequenceShow/hide protein sequence
MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSIDPPQSESQENSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPA
CSFVVRIKA