; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004132 (gene) of Snake gourd v1 genome

Gene IDTan0004132
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibonuclease H
Genome locationLG08:60719757..60721018
RNA-Seq ExpressionTan0004132
SyntenyTan0004132
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]9.7e-5647.41Show/hide
Query:  IEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD--GTEQALNGVHPEIVNQTIEFTKVEARVIHQPNNDT
        +EI    L+++ ++M+ PS +R   +YC FHR HGHA  DC+ L++E+E LIR GYLKEY+++   T+   +   P    +TI    +E     +   D 
Subjt:  IEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD--GTEQALNGVHPEIVNQTIEFTKVEARVIHQPNNDT

Query:  LVVTLA-----IANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVNFLVVECTPAYNAILG
                   IANV VH VL+DGGS AD+LS TA+ A+ L   +LK +  PLVGFGGERV PEG  E PVTFG G  + TKMV+ LVV  T +YNAILG
Subjt:  LVVTLA-----IANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVNFLVVECTPAYNAILG

Query:  RATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST
        R T+H L+AI STYHQ +KFPT  GVG +K EQ+ SRECY+T++++  +++
Subjt:  RATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]9.1e-5440.82Show/hide
Query:  PPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD-------------------------------
        P E++L+EI +  L+++ ++M  P  +R   +YC FHRDH HA  DC+ L+ E++ LI+ GYLKEY++D                               
Subjt:  PPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD-------------------------------

Query:  ----------GTEQALNGVHPEIVNQ---TIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFG
                   T Q  + ++   V +    IEF++ EA  +  P+ND LV+TL IAN  VH +L+DGGSSAD++SLTA+ A+ L     K +   LV F 
Subjt:  ----------GTEQALNGVHPEIVNQ---TIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFG

Query:  GERVNPEGNFELPVTFGEGLNATTKMVNFLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST
        GERV PEG  EL VTFG G  + T +++FLV++   +YNAILGR T+H LKAI STYHQ + FPT  G+G +K EQ+ SRECY+T++K   +++
Subjt:  GERVNPEGNFELPVTFGEGLNATTKMVNFLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]8.5e-6047.35Show/hide
Query:  PPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD-------GTEQALNGVHPEIVNQ--TIEFTK
        P E++ +EI    L+++ ++M+ P  +R   +YC FH DH HA  DC+ L++E+E LI+ GYLKEY++D          QA    H  +  Q   IEF +
Subjt:  PPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD-------GTEQALNGVHPEIVNQ--TIEFTK

Query:  VEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVNFLVVECT
         E   I  P+ND LV+ L IAN  VH +L+DGGSS D++SLTA+  + L    LK +  PLVGFGGE V PEG  ELPVTFG G  + TKMV+FLVV+  
Subjt:  VEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVNFLVVECT

Query:  PAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKSTREEDY
         + NAILGR T+H LKAI S YHQ +KFPT  G+G +K EQ+ SRECY+ ++K   K++   D+
Subjt:  PAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKSTREEDY

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]2.5e-5946.13Show/hide
Query:  TPTTHPPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD--GTEQALNGVHPEIVN---------
        TPTT   E++L+EI    L+++ ++M+ P  +R   +Y  FHRDHGHA  DC+ L++E+E LIR GYLKEY++D   T+   N  +  +           
Subjt:  TPTTHPPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD--GTEQALNGVHPEIVN---------

Query:  QTIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVN
          +EF++ EA  +  P+ND LV+TL IAN  VH +L+DGGSS  ++SLTA+ A+ L    LK +  PLVGFGGERV PEG  ELPV FG G  +  KMV+
Subjt:  QTIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVN

Query:  FLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKSTREEDY
        FLVV    +YN ILGR  +H LK I STYHQ +KFPT +G+G +K EQ+  RECY  ++K   +++   +Y
Subjt:  FLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKSTREEDY

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]5.7e-6449.81Show/hide
Query:  YTPTTHPPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKE------YIQDGTEQALNGVHPEIVNQ---
        YT TT P E++L+EI    L+++ ++M+ PS +R   +YC FHRDH HA  DC+ L++E+E LIR GYLKE         D  E   N    E+ +    
Subjt:  YTPTTHPPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKE------YIQDGTEQALNGVHPEIVNQ---

Query:  ----TIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTK
            TIEF++ EA  +   +ND LV+TL IANV VH +L+DGGSSAD++S TA+ A+ LE  +LK +  PLVGFGGERV  EG  ELPVTFG G    TK
Subjt:  ----TIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTK

Query:  MVNFLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST
        MV+FLVV  T +YN ILGR T+H LK I STYHQ +KFPT  GV  +K EQ+ SRECY+T+++   +++
Subjt:  MVNFLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141474.7e-5647.41Show/hide
Query:  IEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD--GTEQALNGVHPEIVNQTIEFTKVEARVIHQPNNDT
        +EI    L+++ ++M+ PS +R   +YC FHR HGHA  DC+ L++E+E LIR GYLKEY+++   T+   +   P    +TI    +E     +   D 
Subjt:  IEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD--GTEQALNGVHPEIVNQTIEFTKVEARVIHQPNNDT

Query:  LVVTLA-----IANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVNFLVVECTPAYNAILG
                   IANV VH VL+DGGS AD+LS TA+ A+ L   +LK +  PLVGFGGERV PEG  E PVTFG G  + TKMV+ LVV  T +YNAILG
Subjt:  LVVTLA-----IANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVNFLVVECTPAYNAILG

Query:  RATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST
        R T+H L+AI STYHQ +KFPT  GVG +K EQ+ SRECY+T++++  +++
Subjt:  RATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST

A0A6J1D8C9 uncharacterized protein LOC1110183004.4e-5440.82Show/hide
Query:  PPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD-------------------------------
        P E++L+EI +  L+++ ++M  P  +R   +YC FHRDH HA  DC+ L+ E++ LI+ GYLKEY++D                               
Subjt:  PPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD-------------------------------

Query:  ----------GTEQALNGVHPEIVNQ---TIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFG
                   T Q  + ++   V +    IEF++ EA  +  P+ND LV+TL IAN  VH +L+DGGSSAD++SLTA+ A+ L     K +   LV F 
Subjt:  ----------GTEQALNGVHPEIVNQ---TIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFG

Query:  GERVNPEGNFELPVTFGEGLNATTKMVNFLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST
        GERV PEG  EL VTFG G  + T +++FLV++   +YNAILGR T+H LKAI STYHQ + FPT  G+G +K EQ+ SRECY+T++K   +++
Subjt:  GERVNPEGNFELPVTFGEGLNATTKMVNFLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST

A0A6J1DAK4 uncharacterized protein LOC1110189024.1e-6047.35Show/hide
Query:  PPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD-------GTEQALNGVHPEIVNQ--TIEFTK
        P E++ +EI    L+++ ++M+ P  +R   +YC FH DH HA  DC+ L++E+E LI+ GYLKEY++D          QA    H  +  Q   IEF +
Subjt:  PPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD-------GTEQALNGVHPEIVNQ--TIEFTK

Query:  VEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVNFLVVECT
         E   I  P+ND LV+ L IAN  VH +L+DGGSS D++SLTA+  + L    LK +  PLVGFGGE V PEG  ELPVTFG G  + TKMV+FLVV+  
Subjt:  VEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVNFLVVECT

Query:  PAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKSTREEDY
         + NAILGR T+H LKAI S YHQ +KFPT  G+G +K EQ+ SRECY+ ++K   K++   D+
Subjt:  PAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKSTREEDY

A0A6J1DP33 uncharacterized protein LOC1110228861.2e-5946.13Show/hide
Query:  TPTTHPPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD--GTEQALNGVHPEIVN---------
        TPTT   E++L+EI    L+++ ++M+ P  +R   +Y  FHRDHGHA  DC+ L++E+E LIR GYLKEY++D   T+   N  +  +           
Subjt:  TPTTHPPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKEYIQD--GTEQALNGVHPEIVN---------

Query:  QTIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVN
          +EF++ EA  +  P+ND LV+TL IAN  VH +L+DGGSS  ++SLTA+ A+ L    LK +  PLVGFGGERV PEG  ELPV FG G  +  KMV+
Subjt:  QTIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVN

Query:  FLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKSTREEDY
        FLVV    +YN ILGR  +H LK I STYHQ +KFPT +G+G +K EQ+  RECY  ++K   +++   +Y
Subjt:  FLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKSTREEDY

A0A6J1DRG9 uncharacterized protein LOC1110235872.8e-6449.81Show/hide
Query:  YTPTTHPPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKE------YIQDGTEQALNGVHPEIVNQ---
        YT TT P E++L+EI    L+++ ++M+ PS +R   +YC FHRDH HA  DC+ L++E+E LIR GYLKE         D  E   N    E+ +    
Subjt:  YTPTTHPPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFHRDHGHAAHDCYQLRDEIETLIREGYLKE------YIQDGTEQALNGVHPEIVNQ---

Query:  ----TIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTK
            TIEF++ EA  +   +ND LV+TL IANV VH +L+DGGSSAD++S TA+ A+ LE  +LK +  PLVGFGGERV  EG  ELPVTFG G    TK
Subjt:  ----TIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKENLTPLVGFGGERVNPEGNFELPVTFGEGLNATTK

Query:  MVNFLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST
        MV+FLVV  T +YN ILGR T+H LK I STYHQ +KFPT  GV  +K EQ+ SRECY+T+++   +++
Subjt:  MVNFLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTAGAGGAACTGATACGATCAAAGGAAGCACCTGGTCGCGAGAGAAGTGACAGACACCCGGATCAAGATAAGACTCGGGATGATTCTTTTTCTAGCTCAAAGAG
GAGGAGAGTTGAGGATCGAGGTCGAGGTCGATCAGATCAAGGTCGAGATCGACCAGAGCAAGGGACCATCCCCGATCAACATTTTGAAAGGTATACACCCACAACTCATC
CTCCTGAGAAGATCTTGATAGAAATCGACCATCTAAACCTGATGAGATTTTCAGATAAAATGAGAACTCCATCTGTAAGAAGGGATCATAAAAAATACTGCTCGTTTCAC
AGAGATCATGGGCATGCCGCCCATGATTGCTACCAGCTCCGAGACGAGATCGAAACCTTAATCAGGGAAGGATATTTGAAGGAGTATATCCAAGATGGAACTGAGCAGGC
ATTAAACGGAGTCCACCCTGAGATTGTGAACCAGACCATAGAGTTCACTAAGGTCGAAGCTAGGGTTATCCATCAACCTAATAATGATACTTTGGTTGTAACCCTAGCTA
TAGCCAATGTGAATGTTCACGTGGTCCTTATAGATGGAGGGAGCTCAGCCGATGTCTTGTCTCTAACTGCCTTCAATGCATTGAGGCTAGAGAGAGGACTTCTGAAAGAG
AATCTGACTCCTCTGGTTGGATTTGGGGGAGAAAGAGTTAATCCTGAGGGCAACTTCGAACTCCCTGTCACCTTTGGGGAAGGGCTAAATGCAACTACCAAGATGGTTAA
CTTTTTAGTAGTAGAATGCACGCCAGCTTACAATGCAATCCTTGGAAGGGCAACACTCCATCAGTTGAAAGCAATAACTTCCACATATCATCAATTGTTGAAATTTCCTA
CCCTAAATGGAGTTGGAACTGTCAAAGCAGAACAAAAAACTTCAAGGGAATGTTACTTCACAACATTGAAGGAGACTAAGAAGTCAACTCGAGAAGAAGACTATAGCCCC
AGCCTTGTCGAGGCCGACCACAGAATAGTCAGGCCGACCTCGCCTCGATGGATTACAAGGGGGCTTTTACCTTTTTTATATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTAGAGGAACTGATACGATCAAAGGAAGCACCTGGTCGCGAGAGAAGTGACAGACACCCGGATCAAGATAAGACTCGGGATGATTCTTTTTCTAGCTCAAAGAG
GAGGAGAGTTGAGGATCGAGGTCGAGGTCGATCAGATCAAGGTCGAGATCGACCAGAGCAAGGGACCATCCCCGATCAACATTTTGAAAGGTATACACCCACAACTCATC
CTCCTGAGAAGATCTTGATAGAAATCGACCATCTAAACCTGATGAGATTTTCAGATAAAATGAGAACTCCATCTGTAAGAAGGGATCATAAAAAATACTGCTCGTTTCAC
AGAGATCATGGGCATGCCGCCCATGATTGCTACCAGCTCCGAGACGAGATCGAAACCTTAATCAGGGAAGGATATTTGAAGGAGTATATCCAAGATGGAACTGAGCAGGC
ATTAAACGGAGTCCACCCTGAGATTGTGAACCAGACCATAGAGTTCACTAAGGTCGAAGCTAGGGTTATCCATCAACCTAATAATGATACTTTGGTTGTAACCCTAGCTA
TAGCCAATGTGAATGTTCACGTGGTCCTTATAGATGGAGGGAGCTCAGCCGATGTCTTGTCTCTAACTGCCTTCAATGCATTGAGGCTAGAGAGAGGACTTCTGAAAGAG
AATCTGACTCCTCTGGTTGGATTTGGGGGAGAAAGAGTTAATCCTGAGGGCAACTTCGAACTCCCTGTCACCTTTGGGGAAGGGCTAAATGCAACTACCAAGATGGTTAA
CTTTTTAGTAGTAGAATGCACGCCAGCTTACAATGCAATCCTTGGAAGGGCAACACTCCATCAGTTGAAAGCAATAACTTCCACATATCATCAATTGTTGAAATTTCCTA
CCCTAAATGGAGTTGGAACTGTCAAAGCAGAACAAAAAACTTCAAGGGAATGTTACTTCACAACATTGAAGGAGACTAAGAAGTCAACTCGAGAAGAAGACTATAGCCCC
AGCCTTGTCGAGGCCGACCACAGAATAGTCAGGCCGACCTCGCCTCGATGGATTACAAGGGGGCTTTTACCTTTTTTATATTATTAA
Protein sequenceShow/hide protein sequence
MSVEELIRSKEAPGRERSDRHPDQDKTRDDSFSSSKRRRVEDRGRGRSDQGRDRPEQGTIPDQHFERYTPTTHPPEKILIEIDHLNLMRFSDKMRTPSVRRDHKKYCSFH
RDHGHAAHDCYQLRDEIETLIREGYLKEYIQDGTEQALNGVHPEIVNQTIEFTKVEARVIHQPNNDTLVVTLAIANVNVHVVLIDGGSSADVLSLTAFNALRLERGLLKE
NLTPLVGFGGERVNPEGNFELPVTFGEGLNATTKMVNFLVVECTPAYNAILGRATLHQLKAITSTYHQLLKFPTLNGVGTVKAEQKTSRECYFTTLKETKKSTREEDYSP
SLVEADHRIVRPTSPRWITRGLLPFLYY