| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0063431.1 Retrotransposon gag protein [Cucumis melo var. makuwa] | 7.0e-28 | 54.22 | Show/hide |
Query: MTLKEFFFRNVI--HMKE-------NEENFVAV--YYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTF
+TL EFF R+ + H KE + + V V Y+ ++EVD+ E+KQRTSVFD IKPSTTR SVF+R+SMT EEENQ PTS+STR S F+RL+ F
Subjt: MTLKEFFFRNVI--HMKE-------NEENFVAV--YYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTF
Query: TSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELFDEVSHN--KVQSIVPSRMKRKFSVLINTEGSL
TS+K +PSTSVFDRLK+ + Q M K ++F E ++N K+ S VPSRMKRK SV I+TE SL
Subjt: TSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELFDEVSHN--KVQSIVPSRMKRKFSVLINTEGSL
|
|
| TYK02147.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 4.6e-27 | 53.01 | Show/hide |
Query: MTLKEFFFRNVI--HMKENEE----NFVAVYYIE-----AEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTF
+TL EFF R+ + H KE E + V++ ++ +EEVD+ E+K+RTSVF RIKPSTTR SVFQR+SM EEENQ PTS STR F+RL+
Subjt: MTLKEFFFRNVI--HMKENEE----NFVAVYYIE-----AEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTF
Query: TSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELFDEVSH--NKVQSIVPSRMKRKFSVLINTEGSL
TS+K +PSTS FDRLK+T+ Q + M T KA+LF E ++ +K+ + +PSRMKRK SV I+TEGSL
Subjt: TSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELFDEVSH--NKVQSIVPSRMKRKFSVLINTEGSL
|
|
| TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.5e-27 | 60.47 | Show/hide |
Query: YIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-D
Y ++EV++ E+ QRTSVFDRIKPSTTR SVFQR+SM EEENQ PT TR S F+RL+ TS+K +PSTS FDRLK+T+ Q + M +SKA+ F +
Subjt: YIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-D
Query: EVSHNKVQSIVPSRMKRKFSVLINTEGSL
E +K+ S VPSRMKRK SV INTEGSL
Subjt: EVSHNKVQSIVPSRMKRKFSVLINTEGSL
|
|
| TYK14888.1 gag protease polyprotein [Cucumis melo var. makuwa] | 3.5e-27 | 60.47 | Show/hide |
Query: YIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-D
Y ++EV++ E+ QRTSVFDRIKPSTTR SVFQR+SM EEENQ PT TR S F+RL+ TS+K +PSTS FDRLK+T+ Q + M +SKA+ F +
Subjt: YIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-D
Query: EVSHNKVQSIVPSRMKRKFSVLINTEGSL
E +K+ S VPSRMKRK SV INTEGSL
Subjt: EVSHNKVQSIVPSRMKRKFSVLINTEGSL
|
|
| TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 3.5e-27 | 55.17 | Show/hide |
Query: NVIHMKENEENFVAVYYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSS
N++ + N +++ EEVD+ E+KQRTSVFDRIKP TTR VFQR+SM EEENQ PTS+ R S F+RL+ TS+K +PSTS FDRLK+T++
Subjt: NVIHMKENEENFVAVYYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSS
Query: QDESMMNTSKAELFDEVS-HNKVQSIVPSRMKRKFSVLINTEGSL
Q + M + KA+ F E + NK+ S VPSRMKRK SV INTEGSL
Subjt: QDESMMNTSKAELFDEVS-HNKVQSIVPSRMKRKFSVLINTEGSL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TQ06 Retrotransposon gag protein | 2.2e-27 | 53.94 | Show/hide |
Query: MTLKEFFFRNVI--HMKE-------NEENFVAV--YYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTF
+TL EFF R+ + H +E + + V V Y EEVD+ E+KQRTSVFDRIKP TTR SVFQR+SM EEENQ PTS+ R S F+RL+
Subjt: MTLKEFFFRNVI--HMKE-------NEENFVAV--YYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTF
Query: TSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-DEVSHNKVQSIVPSRMKRKFSVLINTEGSL
TS+K +PSTS FDRLK+T+ Q + M + KA+ F +E +K+ S VPSRMKRK SV INTEGSL
Subjt: TSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-DEVSHNKVQSIVPSRMKRKFSVLINTEGSL
|
|
| A0A5D3CD55 Ty3-gypsy retrotransposon protein | 1.7e-27 | 60.47 | Show/hide |
Query: YIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-D
Y ++EV++ E+ QRTSVFDRIKPSTTR SVFQR+SM EEENQ PT TR S F+RL+ TS+K +PSTS FDRLK+T+ Q + M +SKA+ F +
Subjt: YIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-D
Query: EVSHNKVQSIVPSRMKRKFSVLINTEGSL
E +K+ S VPSRMKRK SV INTEGSL
Subjt: EVSHNKVQSIVPSRMKRKFSVLINTEGSL
|
|
| A0A5D3CK61 Retrotransposon gag protein | 3.4e-28 | 54.22 | Show/hide |
Query: MTLKEFFFRNVI--HMKE-------NEENFVAV--YYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTF
+TL EFF R+ + H KE + + V V Y+ ++EVD+ E+KQRTSVFD IKPSTTR SVF+R+SMT EEENQ PTS+STR S F+RL+ F
Subjt: MTLKEFFFRNVI--HMKE-------NEENFVAV--YYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTF
Query: TSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELFDEVSHN--KVQSIVPSRMKRKFSVLINTEGSL
TS+K +PSTSVFDRLK+ + Q M K ++F E ++N K+ S VPSRMKRK SV I+TE SL
Subjt: TSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELFDEVSHN--KVQSIVPSRMKRKFSVLINTEGSL
|
|
| A0A5D3CUI5 Gag protease polyprotein | 1.7e-27 | 60.47 | Show/hide |
Query: YIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-D
Y ++EV++ E+ QRTSVFDRIKPSTTR SVFQR+SM EEENQ PT TR S F+RL+ TS+K +PSTS FDRLK+T+ Q + M +SKA+ F +
Subjt: YIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSSQDESMMNTSKAELF-D
Query: EVSHNKVQSIVPSRMKRKFSVLINTEGSL
E +K+ S VPSRMKRK SV INTEGSL
Subjt: EVSHNKVQSIVPSRMKRKFSVLINTEGSL
|
|
| A0A5D3D209 Retrotransposon gag protein | 1.7e-27 | 55.17 | Show/hide |
Query: NVIHMKENEENFVAVYYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSS
N++ + N +++ EEVD+ E+KQRTSVFDRIKP TTR VFQR+SM EEENQ PTS+ R S F+RL+ TS+K +PSTS FDRLK+T++
Subjt: NVIHMKENEENFVAVYYIEAEEVDDVKEVKQRTSVFDRIKPSTTRPSVFQRMSMTATEEENQDPTSSSTRPSVFQRLNTFTSRKCQPSTSVFDRLKVTSS
Query: QDESMMNTSKAELFDEVS-HNKVQSIVPSRMKRKFSVLINTEGSL
Q + M + KA+ F E + NK+ S VPSRMKRK SV INTEGSL
Subjt: QDESMMNTSKAELFDEVS-HNKVQSIVPSRMKRKFSVLINTEGSL
|
|
