; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004172 (gene) of Snake gourd v1 genome

Gene IDTan0004172
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCopper-binding periplasmic protein
Genome locationLG05:42409564..42410010
RNA-Seq ExpressionTan0004172
SyntenyTan0004172
Gene Ontology termsGO:0071704 - organic substance metabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939173.1 uncharacterized protein LOC111445167 [Cucurbita moschata]5.4e-5381.94Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKS--VPL
        MAI+VCSEIS+ GISPRISFSHDLNQ DLLPSSSDCNR+ LDLT LESDFDFCIG LL QDLS  DELFSNGKILPVEIKKSIEPNREV +P +S   P 
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKS--VPL

Query:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
        +P DP+RNSVSS KKSLK+LLSASFDAD K QSKSFWQFKRSSS
Subjt:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

XP_022971826.1 uncharacterized protein LOC111470497 isoform X1 [Cucurbita maxima]6.4e-5482.39Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPLIP
        MAI+VCSEISS GISPRISFSHDLNQ D LPSSSDCNR  LDL+ LESDFDFCIG LL+QDLS  DELF NGKILPVEIKKSIEPNREVS+PN+S P IP
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPLIP

Query:  SDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
         DP R+SVSS KKSLK+LLSASFDA+ K QSKSFWQFKRSSS
Subjt:  SDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

XP_022971829.1 uncharacterized protein LOC111470497 isoform X2 [Cucurbita maxima]6.4e-5482.39Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPLIP
        MAI+VCSEISS GISPRISFSHDLNQ D LPSSSDCNR  LDL+ LESDFDFCIG LL+QDLS  DELF NGKILPVEIKKSIEPNREVS+PN+S P IP
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPLIP

Query:  SDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
         DP R+SVSS KKSLK+LLSASFDA+ K QSKSFWQFKRSSS
Subjt:  SDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

XP_022993317.1 uncharacterized protein LOC111489360 [Cucurbita maxima]4.2e-5381.25Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKS--VPL
        MAI+VCSEIS+ GISPRISFSHDLNQ DLLPSSSDCNR+ LDLT LESDFDFCIG LL QDLS  DELFSNGKILP+EIKKSIEPNRE  +P +S   PL
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKS--VPL

Query:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
        +P DP+RNSVSS KKSLK+LLSASFDAD K QSKSFWQFKRSSS
Subjt:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

XP_023550641.1 uncharacterized protein LOC111808723 [Cucurbita pepo subsp. pepo]1.6e-5281.25Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVP--L
        MAI+VCSEIS+ GISPRISFSHDLNQ DLLPSSSDCNR+ LDL+ LESDFDFCIG LL QDLS  DELFSNGKILPVEIKKSIEPNREV +P +S P   
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVP--L

Query:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
        +P DP+RNSVSS KKSLK+LLSASFDAD K QSKSFWQFKRSSS
Subjt:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

TrEMBL top hitse value%identityAlignment
A0A6J1FKX8 uncharacterized protein LOC1114451672.6e-5381.94Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKS--VPL
        MAI+VCSEIS+ GISPRISFSHDLNQ DLLPSSSDCNR+ LDLT LESDFDFCIG LL QDLS  DELFSNGKILPVEIKKSIEPNREV +P +S   P 
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKS--VPL

Query:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
        +P DP+RNSVSS KKSLK+LLSASFDAD K QSKSFWQFKRSSS
Subjt:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

A0A6J1H5M5 uncharacterized protein LOC1114603362.5e-5179.17Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLES--DFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPL
        MAI+VCSEISS GISPRISFSHDLNQ D LPSSSDCNR  LDL+ LES  DFDFCIG LL+QDLS  DELF NGKILPVEIKKS+EPNREVS+PN+S P 
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLES--DFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPL

Query:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
        IP DP  +SVSS KKSLK+LLSASFDA+ K  SKSFWQFKRSSS
Subjt:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

A0A6J1I4A0 uncharacterized protein LOC111470497 isoform X13.1e-5482.39Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPLIP
        MAI+VCSEISS GISPRISFSHDLNQ D LPSSSDCNR  LDL+ LESDFDFCIG LL+QDLS  DELF NGKILPVEIKKSIEPNREVS+PN+S P IP
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPLIP

Query:  SDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
         DP R+SVSS KKSLK+LLSASFDA+ K QSKSFWQFKRSSS
Subjt:  SDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

A0A6J1I9N3 uncharacterized protein LOC111470497 isoform X23.1e-5482.39Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPLIP
        MAI+VCSEISS GISPRISFSHDLNQ D LPSSSDCNR  LDL+ LESDFDFCIG LL+QDLS  DELF NGKILPVEIKKSIEPNREVS+PN+S P IP
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPLIP

Query:  SDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
         DP R+SVSS KKSLK+LLSASFDA+ K QSKSFWQFKRSSS
Subjt:  SDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

A0A6J1JSG5 uncharacterized protein LOC1114893602.0e-5381.25Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKS--VPL
        MAI+VCSEIS+ GISPRISFSHDLNQ DLLPSSSDCNR+ LDLT LESDFDFCIG LL QDLS  DELFSNGKILP+EIKKSIEPNRE  +P +S   PL
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKS--VPL

Query:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
        +P DP+RNSVSS KKSLK+LLSASFDAD K QSKSFWQFKRSSS
Subjt:  IPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48780.1 unknown protein6.9e-0636.96Show/hide
Query:  RISFSHDLNQTDLLP-----SSSDCNRDCLDLTFLESDFDFCIGTLL-MQDLSFVDELFSNGKILPVEI-KKSIEPNR--EVSRPNKSVPLIPSDPSRNS
        RISFS DL Q+D  P      S    RD   L    SDF+F I       D S  DE+F++G ILP  +   S  P R  +   P  +  L PS  S   
Subjt:  RISFSHDLNQTDLLP-----SSSDCNRDCLDLTFLESDFDFCIGTLL-MQDLSFVDELFSNGKILPVEI-KKSIEPNR--EVSRPNKSVPLIPSDPSRNS

Query:  V---SSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
        +    S K++  +   A+ D++ +  SKSFW FKRSSS
Subjt:  V---SSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

AT1G67050.1 unknown protein4.5e-1338.31Show/hide
Query:  MAIDVCSEISSFGISPRISFSHDLNQTDLLP------SSSDCNRDCLDLTFLESDFDFCI------GTLLMQDLSFVDELFSNGKILPVEIKKSIEPNRE
        MA+D+ SE S+  +SPRISFS D  Q+D +P       SS+     L+ +    DFDFCI      G    Q     DELFSNGKILP EIKK  EP ++
Subjt:  MAIDVCSEISSFGISPRISFSHDLNQTDLLP------SSSDCNRDCLDLTFLESDFDFCI------GTLLMQDLSFVDELFSNGKILPVEIKKSIEPNRE

Query:  VSRPNKSVPLIPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS
           P      + S P            ++        + K  +KSFW FKRSSS
Subjt:  VSRPNKSVPLIPSDPSRNSVSSYKKSLKKLLSASFDADHKLQSKSFWQFKRSSS

AT1G68330.1 unknown protein1.4e-1444.81Show/hide
Query:  MAIDV-CSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLE--SDFDFCIG-TLLMQDLSFVDELFSNGKILPVEIKKSIE-PNREVSRPNKS
        MAIDV CSE S  GISPRISFS+DL+       S+D     LD T L+  S+FDFC G +  +Q++S  DELFS GKILPV+IKK    P     R  +S
Subjt:  MAIDV-CSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLE--SDFDFCIG-TLLMQDLSFVDELFSNGKILPVEIKKSIE-PNREVSRPNKS

Query:  VPLIPSDPSRNSVSSYKKSLKK-------LLSASFDADHKLQSKSFWQFKRSSS
          L  S  S +S SS  ++ +K       LL+   D + K +   F QFKRS S
Subjt:  VPLIPSDPSRNSVSSYKKSLKK-------LLSASFDADHKLQSKSFWQFKRSSS

AT3G18300.1 unknown protein6.5e-0435.1Show/hide
Query:  RISFSHDLNQTDL-----LPSSSDCNRDCLDLTFLESDFDFCIGTLL-MQDLSFVDELFSNGKILPV----EIKKSIEPNR--------EVSRPNKS---
        R SF+ DL Q+D         S    RD   L    SDF+F I +     D S  DE+F++G ILPV        S  P R         VS P  S   
Subjt:  RISFSHDLNQTDL-----LPSSSDCNRDCLDLTFLESDFDFCIGTLL-MQDLSFVDELFSNGKILPV----EIKKSIEPNR--------EVSRPNKS---

Query:  --VPL-IPSDPSRNSVSSYKKSLK-KLLSASFDADHKLQSKSFWQFKRSSS
          +PL +P    + SV   + SL  +   A+ D++ +  SKSFW FKRSSS
Subjt:  --VPL-IPSDPSRNSVSSYKKSLK-KLLSASFDADHKLQSKSFWQFKRSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCGATGTTTGCTCCGAGATTTCCAGTTTCGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGACCGATTTGTTGCCTTCTTCTTCCGATTGCAA
TCGCGATTGTTTGGATTTGACTTTTCTCGAATCCGATTTCGATTTCTGCATTGGAACTCTTCTTATGCAAGATCTCTCCTTCGTCGATGAACTTTTCTCCAATGGAAAAA
TTCTCCCTGTCGAAATCAAGAAATCGATCGAGCCAAACAGAGAAGTTTCTAGACCTAACAAATCCGTTCCTCTAATTCCATCCGATCCTTCGAGAAATTCAGTCTCCTCC
TACAAGAAGAGTCTCAAAAAGCTTCTATCCGCGAGTTTCGACGCTGATCACAAACTGCAATCCAAATCCTTCTGGCAGTTTAAACGAAGCAGTAGTCAATGGAAGTCTTC
GGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCGATGTTTGCTCCGAGATTTCCAGTTTCGGAATCAGTCCGAGAATCTCGTTTTCGCATGATCTGAACCAGACCGATTTGTTGCCTTCTTCTTCCGATTGCAA
TCGCGATTGTTTGGATTTGACTTTTCTCGAATCCGATTTCGATTTCTGCATTGGAACTCTTCTTATGCAAGATCTCTCCTTCGTCGATGAACTTTTCTCCAATGGAAAAA
TTCTCCCTGTCGAAATCAAGAAATCGATCGAGCCAAACAGAGAAGTTTCTAGACCTAACAAATCCGTTCCTCTAATTCCATCCGATCCTTCGAGAAATTCAGTCTCCTCC
TACAAGAAGAGTCTCAAAAAGCTTCTATCCGCGAGTTTCGACGCTGATCACAAACTGCAATCCAAATCCTTCTGGCAGTTTAAACGAAGCAGTAGTCAATGGAAGTCTTC
GGACTGA
Protein sequenceShow/hide protein sequence
MAIDVCSEISSFGISPRISFSHDLNQTDLLPSSSDCNRDCLDLTFLESDFDFCIGTLLMQDLSFVDELFSNGKILPVEIKKSIEPNREVSRPNKSVPLIPSDPSRNSVSS
YKKSLKKLLSASFDADHKLQSKSFWQFKRSSSQWKSSD