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Tan0004238 (gene) of Snake gourd v1 genome

Gene IDTan0004238
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:56414136..56414698
RNA-Seq ExpressionTan0004238
SyntenyTan0004238
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]1.6e-0937.84Show/hide
Query:  TIVEVESDKIQNEMLCNLVSTHASD--------FTRRL-----DCKDLFVCN--TSTIVTPTLHEVHVDVCELGKKVKKVETKACQLFEKESCEKMSERE
        T+V     K  +++LC++VS H  D        F RR+       +  F  N   +T+V  +  +V +D C+L KK ++ + KA    EKES EKMS  E
Subjt:  TIVEVESDKIQNEMLCNLVSTHASD--------FTRRL-----DCKDLFVCN--TSTIVTPTLHEVHVDVCELGKKVKKVETKACQLFEKESCEKMSERE

Query:  KHEISLWPIEKKERKAKKVSLCKRAYEVKSILFSKQNIFLILYKGTCF
        K E +  P EKKERKAK VSL  R+ E +++L S Q I +++ KG+C+
Subjt:  KHEISLWPIEKKERKAKKVSLCKRAYEVKSILFSKQNIFLILYKGTCF

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]1.6e-0937.84Show/hide
Query:  TIVEVESDKIQNEMLCNLVSTHASD--------FTRRL-----DCKDLFVCN--TSTIVTPTLHEVHVDVCELGKKVKKVETKACQLFEKESCEKMSERE
        T+V     K  +++LC++VS H  D        F RR+       +  F  N   +T+V  +  +V +D C+L KK ++ + KA    EKES EKMS  E
Subjt:  TIVEVESDKIQNEMLCNLVSTHASD--------FTRRL-----DCKDLFVCN--TSTIVTPTLHEVHVDVCELGKKVKKVETKACQLFEKESCEKMSERE

Query:  KHEISLWPIEKKERKAKKVSLCKRAYEVKSILFSKQNIFLILYKGTCF
        K E +  P EKKERKAK VSL  R+ E +++L S Q I +++ KG+C+
Subjt:  KHEISLWPIEKKERKAKKVSLCKRAYEVKSILFSKQNIFLILYKGTCF

XP_023521183.1 uncharacterized protein LOC111784872 [Cucurbita pepo subsp. pepo]1.6e-0937.84Show/hide
Query:  TIVEVESDKIQNEMLCNLVSTHASD--------FTRRL-----DCKDLFVCN--TSTIVTPTLHEVHVDVCELGKKVKKVETKACQLFEKESCEKMSERE
        T+V     K  +++LC++VS H  D        F RR+       +  F  N   +T+V  +  +V +D C+L KK ++ + KA    EKES EKMS  E
Subjt:  TIVEVESDKIQNEMLCNLVSTHASD--------FTRRL-----DCKDLFVCN--TSTIVTPTLHEVHVDVCELGKKVKKVETKACQLFEKESCEKMSERE

Query:  KHEISLWPIEKKERKAKKVSLCKRAYEVKSILFSKQNIFLILYKGTCF
        K E +  P EKKERKAK VSL  R+ E +++L S Q I +++ KG+C+
Subjt:  KHEISLWPIEKKERKAKKVSLCKRAYEVKSILFSKQNIFLILYKGTCF

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]1.6e-0937.84Show/hide
Query:  TIVEVESDKIQNEMLCNLVSTHASD--------FTRRL-----DCKDLFVCN--TSTIVTPTLHEVHVDVCELGKKVKKVETKACQLFEKESCEKMSERE
        T+V     K  +++LC++VS H  D        F RR+       +  F  N   +T+V  +  +V +D C+L KK ++ + KA    EKES EKMS  E
Subjt:  TIVEVESDKIQNEMLCNLVSTHASD--------FTRRL-----DCKDLFVCN--TSTIVTPTLHEVHVDVCELGKKVKKVETKACQLFEKESCEKMSERE

Query:  KHEISLWPIEKKERKAKKVSLCKRAYEVKSILFSKQNIFLILYKGTCF
        K E +  P EKKERKAK VSL  R+ E +++L S Q I +++ KG+C+
Subjt:  KHEISLWPIEKKERKAKKVSLCKRAYEVKSILFSKQNIFLILYKGTCF

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTACAACGATTGTTGAAGTAGAAAGTGATAAGATTCAGAATGAAATGCTTTGTAATTTAGTGTCAACACATGCTAGTGACTTTACTAGGAGATTAGATTGCAA
AGACTTGTTTGTTTGTAACACTTCCACTATTGTAACACCTACTCTTCATGAAGTACATGTTGATGTGTGTGAGTTAGGGAAAAAGGTAAAAAAGGTCGAGACAAAAGCAT
GTCAATTGTTTGAAAAAGAATCTTGTGAGAAAATGAGTGAGAGAGAAAAGCATGAGATTAGTCTATGGCCTATAGAGAAAAAAGAGAGAAAAGCCAAGAAGGTGAGCTTG
TGTAAAAGAGCTTATGAGGTTAAATCTATTTTGTTTTCAAAACAAAATATATTTTTGATTTTGTATAAAGGAACTTGTTTTCTACTTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTACAACGATTGTTGAAGTAGAAAGTGATAAGATTCAGAATGAAATGCTTTGTAATTTAGTGTCAACACATGCTAGTGACTTTACTAGGAGATTAGATTGCAA
AGACTTGTTTGTTTGTAACACTTCCACTATTGTAACACCTACTCTTCATGAAGTACATGTTGATGTGTGTGAGTTAGGGAAAAAGGTAAAAAAGGTCGAGACAAAAGCAT
GTCAATTGTTTGAAAAAGAATCTTGTGAGAAAATGAGTGAGAGAGAAAAGCATGAGATTAGTCTATGGCCTATAGAGAAAAAAGAGAGAAAAGCCAAGAAGGTGAGCTTG
TGTAAAAGAGCTTATGAGGTTAAATCTATTTTGTTTTCAAAACAAAATATATTTTTGATTTTGTATAAAGGAACTTGTTTTCTACTTGGGTGAGCTTAAACCATGTTTTT
CTAGTTTTCTTTTGAGTTCTTACAGGATGCCAAAGCACTCATTGAGAATTTGATTCAAAAGTTAATGCCAAAGCATTTATTGAGAGGAAAAGCTTCAAAATTGCTTCTAA
ATTCATCCATCGC
Protein sequenceShow/hide protein sequence
MNPTTIVEVESDKIQNEMLCNLVSTHASDFTRRLDCKDLFVCNTSTIVTPTLHEVHVDVCELGKKVKKVETKACQLFEKESCEKMSEREKHEISLWPIEKKERKAKKVSL
CKRAYEVKSILFSKQNIFLILYKGTCFLLG