; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004268 (gene) of Snake gourd v1 genome

Gene IDTan0004268
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich cell wall structural protein-like isoform X3
Genome locationLG10:10079782..10080399
RNA-Seq ExpressionTan0004268
SyntenyTan0004268
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022955575.1 glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata]1.9e-0870.05Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGG--GGGSGGGGGYGSGGGGGLGIGIGYGKGG--GAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GG  GGG+GGG G G+G GGGLG G G G GG  G GGGLGGGGG G G GGG+GGG   GIGGG G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGG--GGGSGGGGGYGSGGGGGLGIGIGYGKGG--GAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIG

Query:  AGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYGSGGGGGRGGGAGGGGGYGSG
         GGG G GGG+GGG+GGGKG G+GGG G G GGG G   G GGGAG G+GGG GGG+GGG+GGGAGGG GGG GGG G G+GGG G G G G GGG+G G
Subjt:  AGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYGSGGGGGRGGGAGGGGGYGSG

Query:  SGGGSGG
        +GGG+GG
Subjt:  SGGGSGG

XP_022979921.1 glycine-rich cell wall structural protein-like isoform X1 [Cucurbita maxima]2.3e-0965.94Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGG--------GGGHGGGGGYGGGDDEGIG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G GGG GGGLGGG         GGGHGGG G GGG   G G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGG--------GGGHGGGGGYGGGDDEGIG

Query:  GGIGAGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG------GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG----------GGGYG
        GG G G G GFGGG+GGG GGG G G GGG G G GGGAG G GG      GGGAG G+GGG+GGG+GGG+GGGAGGG GGG+GG          GGG+G
Subjt:  GGIGAGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG------GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG----------GGGYG

Query:  SGGGGGRGGGAGGGGGYGSGSGGGSGGRV
         G GGG GGG+GGGGG+G GSGGG GGRV
Subjt:  SGGGGGRGGGAGGGGGYGSGSGGGSGGRV

XP_022979922.1 glycine-rich cell wall structural protein-like isoform X2 [Cucurbita maxima]6.0e-1068.2Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G GGG GGGLGGG GGG GGG G G G   G GGG+G G G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG

Query:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG----------GGGYGSGGGGGRGGGAG
         GFGGG GGG+GGG G G GGG G G GGGAG G GG  GGG G G+GGG+GGG+GGG+GGGAGGG GGG+GG          GGG+G G GGG GGG+G
Subjt:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG----------GGGYGSGGGGGRGGGAG

Query:  GGGGYGSGSGGGSGGRV
        GGGG+G GSGGG GGRV
Subjt:  GGGGYGSGSGGGSGGRV

XP_022979923.1 glycine-rich cell wall structural protein-like isoform X3 [Cucurbita maxima]1.2e-1070.81Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G G G GGG GGG+GGGGG G G GGG+GGG   G GGG G G G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG

Query:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG--GGGYGSGGGGGRGGGAGGGGGYGSG
         GFGGG+GGG GGG G G GGG G G GGG G G GG  GGGAG G+GGG+GGG GGG GGGAGGG GGG GG  GGG+G G GGG GGG+GGGGG+G G
Subjt:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG--GGGYGSGGGGGRGGGAGGGGGYGSG

Query:  SGGGSGGRV
        SGGG GGRV
Subjt:  SGGGSGGRV

XP_022979926.1 glycine-rich cell wall structural protein-like isoform X6 [Cucurbita maxima]1.2e-1069.68Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G GGG GGGLGGG GG  G GGG+GGG   G GGG G G G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG

Query:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGG
         G GGG GGG GGG G G+GGG G G+GGGAG G GGG G G G+GGGSGGG+GG
Subjt:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGG

TrEMBL top hitse value%identityAlignment
A0A6J1GU56 glycine-rich cell wall structural protein 1.8-like isoform X29.4e-0970.05Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGG--GGGSGGGGGYGSGGGGGLGIGIGYGKGG--GAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GG  GGG+GGG G G+G GGGLG G G G GG  G GGGLGGGGG G G GGG+GGG   GIGGG G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGG--GGGSGGGGGYGSGGGGGLGIGIGYGKGG--GAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIG

Query:  AGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYGSGGGGGRGGGAGGGGGYGSG
         GGG G GGG+GGG+GGGKG G+GGG G G GGG G   G GGGAG G+GGG GGG+GGG+GGGAGGG GGG GGG G G+GGG G G G G GGG+G G
Subjt:  AGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYGSGGGGGRGGGAGGGGGYGSG

Query:  SGGGSGG
        +GGG+GG
Subjt:  SGGGSGG

A0A6J1GVG5 glycine-rich cell wall structural protein 1.8-like isoform X19.4e-0970.05Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGG--GGGSGGGGGYGSGGGGGLGIGIGYGKGG--GAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GG  GGG+GGG G G+G GGGLG G G G GG  G GGGLGGGGG G G GGG+GGG   GIGGG G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGG--GGGSGGGGGYGSGGGGGLGIGIGYGKGG--GAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIG

Query:  AGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYGSGGGGGRGGGAGGGGGYGSG
         GGG G GGG+GGG+GGGKG G+GGG G G GGG G   G GGGAG G+GGG GGG+GGG+GGGAGGG GGG GGG G G+GGG G G G G GGG+G G
Subjt:  AGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYGSGGGGGRGGGAGGGGGYGSG

Query:  SGGGSGG
        +GGG+GG
Subjt:  SGGGSGG

A0A6J1IQ14 glycine-rich cell wall structural protein-like isoform X22.9e-1068.2Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G GGG GGGLGGG GGG GGG G G G   G GGG+G G G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG

Query:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG----------GGGYGSGGGGGRGGGAG
         GFGGG GGG+GGG G G GGG G G GGGAG G GG  GGG G G+GGG+GGG+GGG+GGGAGGG GGG+GG          GGG+G G GGG GGG+G
Subjt:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG----------GGGYGSGGGGGRGGGAG

Query:  GGGGYGSGSGGGSGGRV
        GGGG+G GSGGG GGRV
Subjt:  GGGGYGSGSGGGSGGRV

A0A6J1IS46 glycine-rich cell wall structural protein-like isoform X11.1e-0965.94Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGG--------GGGHGGGGGYGGGDDEGIG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G+G G GGG GGGLGGG         GGGHGGG G GGG   G G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGG--------GGGHGGGGGYGGGDDEGIG

Query:  GGIGAGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG------GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG----------GGGYG
        GG G G G GFGGG+GGG GGG G G GGG G G GGGAG G GG      GGGAG G+GGG+GGG+GGG+GGGAGGG GGG+GG          GGG+G
Subjt:  GGIGAGGGSGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG------GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG----------GGGYG

Query:  SGGGGGRGGGAGGGGGYGSGSGGGSGGRV
         G GGG GGG+GGGGG+G GSGGG GGRV
Subjt:  SGGGGGRGGGAGGGGGYGSGSGGGSGGRV

A0A6J1IXQ0 glycine-rich cell wall structural protein-like isoform X35.9e-1170.81Show/hide
Query:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG
        MAKLTY+VGALALVLA ++VG AESRKLEKET GGG G G GGG+G G GGG G G G G GGG GGG+GGGGG G G GGG+GGG   G GGG G G G
Subjt:  MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGG

Query:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG--GGGYGSGGGGGRGGGAGGGGGYGSG
         GFGGG+GGG GGG G G GGG G G GGG G G GG  GGGAG G+GGG+GGG GGG GGGAGGG GGG GG  GGG+G G GGG GGG+GGGGG+G G
Subjt:  SGFGGGSGGGYGGGKGIGYGGGGGSGYGGGAGSGLGG--GGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGG--GGGYGSGGGGGRGGGAGGGGGYGSG

Query:  SGGGSGGRV
        SGGG GGRV
Subjt:  SGGGSGGRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAACTTACTTACAGGGTTGGAGCGTTGGCTCTTGTTCTGGCATTGGTGGTTGTAGGATTGGCTGAAAGCCGGAAGTTGGAGAAGGAAACGTTTGGTGGTGGTGG
CGGCAGTGGTGGTGGTGGTGGGTATGGAAGTGGAGGTGGAGGTGGCCTTGGTATTGGTATTGGTTATGGGAAAGGTGGAGGAGCAGGAGGCGGACTTGGCGGTGGCGGTG
GTGGCGGCCATGGCGGTGGCGGTGGATATGGAGGTGGTGATGACGAAGGAATCGGAGGCGGAATTGGGGCTGGCGGTGGCAGTGGATTTGGAGGCGGATCTGGAGGCGGG
TATGGAGGTGGTAAAGGAATTGGATATGGAGGCGGAGGTGGCAGTGGATATGGAGGTGGCGCTGGCAGCGGGTTAGGAGGTGGCGGTGGCGCTGGCAGCGGATATGGTGG
CGGATCTGGCGGTGGATATGGAGGCGGCTCTGGTGGTGGAGCTGGTGGTGGTAGAGGAGGCGGATCAGGTGGAGGAGGAGGCTATGGCAGCGGAGGTGGTGGTGGTAGAG
GAGGCGGAGCAGGTGGAGGAGGAGGCTATGGCAGCGGTTCTGGTGGAGGAAGCGGTGGCAGAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAACTTACTTACAGGGTTGGAGCGTTGGCTCTTGTTCTGGCATTGGTGGTTGTAGGATTGGCTGAAAGCCGGAAGTTGGAGAAGGAAACGTTTGGTGGTGGTGG
CGGCAGTGGTGGTGGTGGTGGGTATGGAAGTGGAGGTGGAGGTGGCCTTGGTATTGGTATTGGTTATGGGAAAGGTGGAGGAGCAGGAGGCGGACTTGGCGGTGGCGGTG
GTGGCGGCCATGGCGGTGGCGGTGGATATGGAGGTGGTGATGACGAAGGAATCGGAGGCGGAATTGGGGCTGGCGGTGGCAGTGGATTTGGAGGCGGATCTGGAGGCGGG
TATGGAGGTGGTAAAGGAATTGGATATGGAGGCGGAGGTGGCAGTGGATATGGAGGTGGCGCTGGCAGCGGGTTAGGAGGTGGCGGTGGCGCTGGCAGCGGATATGGTGG
CGGATCTGGCGGTGGATATGGAGGCGGCTCTGGTGGTGGAGCTGGTGGTGGTAGAGGAGGCGGATCAGGTGGAGGAGGAGGCTATGGCAGCGGAGGTGGTGGTGGTAGAG
GAGGCGGAGCAGGTGGAGGAGGAGGCTATGGCAGCGGTTCTGGTGGAGGAAGCGGTGGCAGAGTCTAA
Protein sequenceShow/hide protein sequence
MAKLTYRVGALALVLALVVVGLAESRKLEKETFGGGGGSGGGGGYGSGGGGGLGIGIGYGKGGGAGGGLGGGGGGGHGGGGGYGGGDDEGIGGGIGAGGGSGFGGGSGGG
YGGGKGIGYGGGGGSGYGGGAGSGLGGGGGAGSGYGGGSGGGYGGGSGGGAGGGRGGGSGGGGGYGSGGGGGRGGGAGGGGGYGSGSGGGSGGRV