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Tan0004276 (gene) of Snake gourd v1 genome

Gene IDTan0004276
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCLAVATA3/ESR-related protein
Genome locationLG06:74424186..74424467
RNA-Seq ExpressionTan0004276
SyntenyTan0004276
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1668.54Show/hide
Query:  MAKLEDYYFSTSL-TSTKSQACFFLFLLVLV---VPHHFSTLPNSGSASTTMPRPPSSSLAM--------QFEAAMHEVPSGPNPTSNK
        MAK ED YFSTSL TSTKSQACFFLFLLVL+   VP+ FST P+S  AST+ P  P SS AM        QFEA+MHEVPSGPNPTSNK
Subjt:  MAKLEDYYFSTSL-TSTKSQACFFLFLLVLV---VPHHFSTLPNSGSASTTMPRPPSSSLAM--------QFEAAMHEVPSGPNPTSNK

KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]5.9e-1965.59Show/hide
Query:  MAKLEDYYFSTSLTSTKSQACFFLFLLVLVVPHHFSTLPNSGSASTTMPRPPSSSLAM----------------QFEAAMHEVPSGPNPTSNK
        MA+L+++YFSTSLTSTKS+ACFFLFLL+L  P++FSTLP+S SAST   RPPSSSLAM                QFEAAMHEVPSGPNPT+NK
Subjt:  MAKLEDYYFSTSLTSTKSQACFFLFLLVLVVPHHFSTLPNSGSASTTMPRPPSSSLAM----------------QFEAAMHEVPSGPNPTSNK

KGN61461.1 hypothetical protein Csa_006135 [Cucumis sativus]3.5e-1171.88Show/hide
Query:  KSQACFFLFLLV---LVVPHHFSTLPNSGSASTTMPRPPSSSLAMQFEAAMHEVPSGPNPTSNK
        KSQACFFLFLLV   LVVPH  ST+PN+ S      RPPS+ +AM FEAAMHEVPSGPNPTSNK
Subjt:  KSQACFFLFLLV---LVVPHHFSTLPNSGSASTTMPRPPSSSLAMQFEAAMHEVPSGPNPTSNK

TrEMBL top hitse value%identityAlignment
A0A0A0LNB8 CLAVATA3/ESR-related protein1.7e-1171.88Show/hide
Query:  KSQACFFLFLLV---LVVPHHFSTLPNSGSASTTMPRPPSSSLAMQFEAAMHEVPSGPNPTSNK
        KSQACFFLFLLV   LVVPH  ST+PN+ S      RPPS+ +AM FEAAMHEVPSGPNPTSNK
Subjt:  KSQACFFLFLLV---LVVPHHFSTLPNSGSASTTMPRPPSSSLAMQFEAAMHEVPSGPNPTSNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACTTGAAGATTATTATTTCTCCACAAGCTTAACTTCAACCAAGTCTCAAGCTTGCTTCTTCCTCTTCCTCCTCGTCCTCGTCGTCCCTCATCACTTCTCGAC
CCTGCCGAACTCGGGCTCGGCGAGTACTACTATGCCTCGTCCTCCTTCATCTTCTTTGGCTATGCAATTTGAAGCAGCTATGCATGAAGTTCCTAGTGGCCCAAATCCCA
CATCCAACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAACTTGAAGATTATTATTTCTCCACAAGCTTAACTTCAACCAAGTCTCAAGCTTGCTTCTTCCTCTTCCTCCTCGTCCTCGTCGTCCCTCATCACTTCTCGAC
CCTGCCGAACTCGGGCTCGGCGAGTACTACTATGCCTCGTCCTCCTTCATCTTCTTTGGCTATGCAATTTGAAGCAGCTATGCATGAAGTTCCTAGTGGCCCAAATCCCA
CATCCAACAAGTAA
Protein sequenceShow/hide protein sequence
MAKLEDYYFSTSLTSTKSQACFFLFLLVLVVPHHFSTLPNSGSASTTMPRPPSSSLAMQFEAAMHEVPSGPNPTSNK