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Tan0004289 (gene) of Snake gourd v1 genome

Gene IDTan0004289
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPathogen-induced protein CuPi1
Genome locationLG02:3603883..3605161
RNA-Seq ExpressionTan0004289
SyntenyTan0004289
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589129.1 hypothetical protein SDJN03_17694, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0442.11Show/hide
Query:  MSGSKGIALVGFLFFLLLISSQVTAARKLKVAGKNDVAAAIHEDKGSLISYVSPGTGNRNKPICDVPGHY-NCLVPKPVPKPEPCDNLYNRHCPP
        MSG KG  L+ FL F  L SS++ AARKL VAG N  AA +HE +    ++V+P T   ++P C     Y +C    P  +P  CD  Y ++CPP
Subjt:  MSGSKGIALVGFLFFLLLISSQVTAARKLKVAGKNDVAAAIHEDKGSLISYVSPGTGNRNKPICDVPGHY-NCLVPKPVPKPEPCDNLYNRHCPP
XP_004144528.1 uncharacterized protein LOC101208804 [Cucumis sativus]5.2e-0744.21Show/hide
Query:  MSGSKG---IALVGFLFFLLLISSQVTAARKLKVAGKNDVAAAIHEDKGSLISYVSPGTGNRNKPICDVPGHYNCLVPKPVPKPEPCDNLYNRHC
        MS  KG     L  F FF+L ISS+VTAARKLK          +H++    I Y++P T  RNKPICD  G Y+  +P+  P  E C N Y R C
Subjt:  MSGSKG---IALVGFLFFLLLISSQVTAARKLKVAGKNDVAAAIHEDKGSLISYVSPGTGNRNKPICDVPGHYNCLVPKPVPKPEPCDNLYNRHC
TrEMBL top hitse value%identityAlignment
O24512 Pathogen-induced protein CuPi12.5e-0744.21Show/hide
Query:  MSGSKG---IALVGFLFFLLLISSQVTAARKLKVAGKNDVAAAIHEDKGSLISYVSPGTGNRNKPICDVPGHYNCLVPKPVPKPEPCDNLYNRHC
        MS  KG     L  F FF+L ISS+VTAARKLK          +H++    I Y++P T  RNKPICD  G Y+  +P+  P  E C N Y R C
Subjt:  MSGSKG---IALVGFLFFLLLISSQVTAARKLKVAGKNDVAAAIHEDKGSLISYVSPGTGNRNKPICDVPGHYNCLVPKPVPKPEPCDNLYNRHC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGTTCGAAGGGCATTGCTTTGGTGGGTTTCTTGTTCTTCCTTCTCCTCATCTCCTCGCAGGTGACTGCAGCAAGGAAGCTGAAAGTCGCCGGAAAAAATGATGT
AGCAGCGGCCATACATGAAGACAAAGGAAGCCTGATTTCCTATGTCAGCCCCGGGACAGGAAACCGGAACAAACCCATCTGCGATGTCCCCGGCCATTATAATTGCTTAG
TCCCAAAGCCAGTACCGAAGCCTGAACCCTGCGATAATCTATATAACCGACACTGCCCACCGTCAACTGAACTTGGCCCCTAA
mRNA sequenceShow/hide mRNA sequence
CGCCGCTATTGAATAATTTCTCCTATAAAAGGGAGGTGGAAACTATGCATCCCTCACAACTCCATCTCCCTAACCACTTCAATTCCTCCTTTCTATAGTGAGAAAGAACT
TAAAATGAGTGGTTCGAAGGGCATTGCTTTGGTGGGTTTCTTGTTCTTCCTTCTCCTCATCTCCTCGCAGGTGACTGCAGCAAGGAAGCTGAAAGTCGCCGGAAAAAATG
ATGTAGCAGCGGCCATACATGAAGACAAAGGAAGCCTGATTTCCTATGTCAGCCCCGGGACAGGAAACCGGAACAAACCCATCTGCGATGTCCCCGGCCATTATAATTGC
TTAGTCCCAAAGCCAGTACCGAAGCCTGAACCCTGCGATAATCTATATAACCGACACTGCCCACCGTCAACTGAACTTGGCCCCTAAATTAATCAAACACACCATCTAAA
TATAAATAAATAAATTACTCCACTCCATAACTATATAAGTTTAAATCCTATTTTCATCCCTCTAAATCCTCCTTATCTATGTGTGTCTTGGATTTTATTTATGTGTATTA
CAGAGTTGTTATATATGATATCACTTTCGAGATTTCTGTTTTGTGTATAGTCTACCTATTTAAAATGAGTGTCCAAGACTCGAGATCACATGAGACCTTAGACAAAACTT
TG
Protein sequenceShow/hide protein sequence
MSGSKGIALVGFLFFLLLISSQVTAARKLKVAGKNDVAAAIHEDKGSLISYVSPGTGNRNKPICDVPGHYNCLVPKPVPKPEPCDNLYNRHCPPSTELGP