| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.1e-21 | 36.95 | Show/hide |
Query: VSHSEWNRTLEKKSSEILARGRTKGIDSWQPLREGEVTLR--VGSGELSLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEK
+ H NR S IL + + + EG++T R G G + + H ++C I D+SRYG++YL+H KSE+ EK
Subjt: VSHSEWNRTLEKKSSEILARGRTKGIDSWQPLREGEVTLR--VGSGELSLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEK
Query: FKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
FKEYK EVEN +GK++KTLRSDRGGEYMD++F+ Y L QNGVSERR + L+ P F + E A++ILNNVP +
Subjt: FKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
Query: ECL
L
Subjt: ECL
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| KAA0045330.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 2.0e-23 | 38.5 | Show/hide |
Query: KGIDSWQPLREGEVTLRVGSGEL-------------------------SLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEK
+GI SW+ L GE+T++VG+G + + + + H ++C I DYSRYGY+YLM KSE LEK
Subjt: KGIDSWQPLREGEVTLRVGSGEL-------------------------SLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEK
Query: FKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
FKEYK EVEN L K++KT RSDRGGEYMD +F+ Y L QNGVSERR Q L+ P F + +IAVYILN VP +
Subjt: FKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
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| KAA0061307.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-23 | 31.14 | Show/hide |
Query: MTRFNLDEMNGASIDESSQGFDLWDKICCSFTPEREEEDEEGKPTEPPPYGKARRSRRLQRKESVSHSEWNRTLEKKSSEILARGRTKGI-DSWQP----
MT FN+ E+NG +ID+++Q W ++ EG+ T G+ ++ ++ + + + ++ G + + D++ P
Subjt: MTRFNLDEMNGASIDESSQGFDLWDKICCSFTPEREEEDEEGKPTEPPPYGKARRSRRLQRKESVSHSEWNRTLEKKSSEILARGRTKGI-DSWQP----
Query: LREGEVTLR--VGSGELSLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTE
EG++T R G G + + H ++C I +DYSRY ++YL+H KS++ EKFKEYK EVEN LGK++KT RSDRGGEYMD +
Subjt: LREGEVTLR--VGSGELSLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTE
Query: FRGLY----DRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
F+ +++ +AP+ QNGVSERR + L+ P F ++ E +YILNNVP +
Subjt: FRGLY----DRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
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| TYJ99632.1 gag/pol protein [Cucumis melo var. makuwa] | 9.0e-24 | 47.13 | Show/hide |
Query: SWQPLREGEVTLRVGSGELSLFAQQSAHDEVCILAGHDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYA
S++ L E E+TL+VG G++ SAH + +DYSRYGY+YLM KSE LEKFKEYK EVENLL K +K LRS+RGGEYMD F+ Y
Subjt: SWQPLREGEVTLRVGSGELSLFAQQSAHDEVCILAGHDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYA
Query: PTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
L QNGVSERR + L+ P F + E AV+ILNNVP +
Subjt: PTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
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| WP_217833194.1 DDE-type integrase/transposase/recombinase, partial [Synechococcus sp. PCC 7002] | 2.2e-22 | 54.17 | Show/hide |
Query: DYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPR
DYSRY Y+YLMH K ETLEKFKEYK EVENLLGK++KT RS+RGGEYMD F+ Y L QNGVSERR + L+ S P
Subjt: DYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPR
Query: FFSKWYAEIAVYILNNVPQE
F + E AVYILNNVP +
Subjt: FFSKWYAEIAVYILNNVPQE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TQ86 Retrotransposon protein, putative, Ty1-copia subclass | 9.7e-24 | 38.5 | Show/hide |
Query: KGIDSWQPLREGEVTLRVGSGEL-------------------------SLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEK
+GI SW+ L GE+T++VG+G + + + + H ++C I DYSRYGY+YLM KSE LEK
Subjt: KGIDSWQPLREGEVTLRVGSGEL-------------------------SLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEK
Query: FKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
FKEYK EVEN L K++KT RSDRGGEYMD +F+ Y L QNGVSERR Q L+ P F + +IAVYILN VP +
Subjt: FKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
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| A0A5A7TZD0 Gag/pol protein | 9.1e-22 | 53.33 | Show/hide |
Query: DYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPR
DYSRYGY+YLM KSE LEKFKEYKTEVENLL K +K LRSDRGGEYMD F+ Y L QNGVSERR + L+ P
Subjt: DYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPR
Query: FFSKWYAEIAVYILNNVPQE
F + E AV+ILNNVP +
Subjt: FFSKWYAEIAVYILNNVPQE
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| A0A5A7V359 Gag/pol protein | 4.8e-23 | 31.14 | Show/hide |
Query: MTRFNLDEMNGASIDESSQGFDLWDKICCSFTPEREEEDEEGKPTEPPPYGKARRSRRLQRKESVSHSEWNRTLEKKSSEILARGRTKGI-DSWQP----
MT FN+ E+NG +ID+++Q W ++ EG+ T G+ ++ ++ + + + ++ G + + D++ P
Subjt: MTRFNLDEMNGASIDESSQGFDLWDKICCSFTPEREEEDEEGKPTEPPPYGKARRSRRLQRKESVSHSEWNRTLEKKSSEILARGRTKGI-DSWQP----
Query: LREGEVTLR--VGSGELSLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTE
EG++T R G G + + H ++C I +DYSRY ++YL+H KS++ EKFKEYK EVEN LGK++KT RSDRGGEYMD +
Subjt: LREGEVTLR--VGSGELSLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTE
Query: FRGLY----DRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
F+ +++ +AP+ QNGVSERR + L+ P F ++ E +YILNNVP +
Subjt: FRGLY----DRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
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| A0A5D3BIR3 Gag/pol protein | 4.3e-24 | 47.13 | Show/hide |
Query: SWQPLREGEVTLRVGSGELSLFAQQSAHDEVCILAGHDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYA
S++ L E E+TL+VG G++ SAH + +DYSRYGY+YLM KSE LEKFKEYK EVENLL K +K LRS+RGGEYMD F+ Y
Subjt: SWQPLREGEVTLRVGSGELSLFAQQSAHDEVCILAGHDYSRYGYIYLMHRKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYA
Query: PTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
L QNGVSERR + L+ P F + E AV+ILNNVP +
Subjt: PTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
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| E2GK51 Gag/pol protein (Fragment) | 5.3e-22 | 36.95 | Show/hide |
Query: VSHSEWNRTLEKKSSEILARGRTKGIDSWQPLREGEVTLR--VGSGELSLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEK
+ H NR S IL + + + EG++T R G G + + H ++C I D+SRYG++YL+H KSE+ EK
Subjt: VSHSEWNRTLEKKSSEILARGRTKGIDSWQPLREGEVTLR--VGSGELSLFAQQSAHDEVC--------------ILAGHDYSRYGYIYLMHRKSETLEK
Query: FKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
FKEYK EVEN +GK++KTLRSDRGGEYMD++F+ Y L QNGVSERR + L+ P F + E A++ILNNVP +
Subjt: FKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFRGLYDRTRNYAPTLKDWYATMQNGVSERRKQNLVGYGSVDDELCSSPRFFSKWYAEIAVYILNNVPQE
Query: ECL
L
Subjt: ECL
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