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Tan0004361 (gene) of Snake gourd v1 genome

Gene IDTan0004361
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlastid movement impaired 2
Genome locationLG11:19566342..19567048
RNA-Seq ExpressionTan0004361
SyntenyTan0004361
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6396717.1 hypothetical protein SASPL_142873 [Salvia splendens]4.4e-1641.32Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE--NCSYFKRV---IESTAVSTAEAQLKQRR-------
        M ITGE    KTP+QA ++L+NHP H+L  SD V   G +AQP E  H L P  LYFLVE P        +RV   +  TA    E+ +  RR       
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE--NCSYFKRV---IESTAVSTAEAQLKQRR-------

Query:  -RKGLEL-EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM-----AVPRRCAQNGGRIRRL
         R    + E G +RVR+R+RKAEV+KL+ E KD +  AE+++GL M     A   R    GG  R L
Subjt:  -RKGLEL-EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM-----AVPRRCAQNGGRIRRL

RYR14312.1 hypothetical protein Ahy_B04g070865 isoform A [Arachis hypogaea]2.0e-1639.13Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSPG-LYFLVEIP-ENCSYFKRVIESTAVSTAEAQ----------------
        MKI GE    KTP++A  +LKNHP  +L ES+ VK  G +A+P E   +L PG LYFLVE+P +N +   R + S    +A+ +                
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSPG-LYFLVEIP-ENCSYFKRVIESTAVSTAEAQ----------------

Query:  LKQRRRKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMAVPRRCAQNGGR
        LKQ+   G     G +RV++RV +AEV+KL++ CKDE+ AAE+++ L+        +NGGR
Subjt:  LKQRRRKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMAVPRRCAQNGGR

XP_028115913.1 uncharacterized protein At1g66480 [Camellia sinensis]2.6e-1639.87Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE---------------NCSYFKR----------VIEST
        MKI GE   FKTP+QA+ +LK+HP H+L ES+ VK  GI+A+P E    L P  LYFLVE+PE               N S   R          V + T
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE---------------NCSYFKR----------VIEST

Query:  AVSTAEAQLKQRRRKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMA
         +      + +R+ +    E+G +R+++RV KAEV +++ E KDE+ AAE++LGL MA
Subjt:  AVSTAEAQLKQRRRKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMA

XP_042023411.1 uncharacterized protein At1g66480-like isoform X1 [Salvia splendens]4.4e-1641.32Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE--NCSYFKRV---IESTAVSTAEAQLKQRR-------
        M ITGE    KTP+QA ++L+NHP H+L  SD V   G +AQP E  H L P  LYFLVE P        +RV   +  TA    E+ +  RR       
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE--NCSYFKRV---IESTAVSTAEAQLKQRR-------

Query:  -RKGLEL-EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM-----AVPRRCAQNGGRIRRL
         R    + E G +RVR+R+RKAEV+KL+ E KD +  AE+++GL M     A   R    GG  R L
Subjt:  -RKGLEL-EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM-----AVPRRCAQNGGRIRRL

XP_042023412.1 uncharacterized protein At1g66480-like isoform X2 [Salvia splendens]4.4e-1641.32Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE--NCSYFKRV---IESTAVSTAEAQLKQRR-------
        M ITGE    KTP+QA ++L+NHP H+L  SD V   G +AQP E  H L P  LYFLVE P        +RV   +  TA    E+ +  RR       
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE--NCSYFKRV---IESTAVSTAEAQLKQRR-------

Query:  -RKGLEL-EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM-----AVPRRCAQNGGRIRRL
         R    + E G +RVR+R+RKAEV+KL+ E KD +  AE+++GL M     A   R    GG  R L
Subjt:  -RKGLEL-EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM-----AVPRRCAQNGGRIRRL

TrEMBL top hitse value%identityAlignment
A0A444ZJE9 Uncharacterized protein9.5e-1739.13Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSPG-LYFLVEIP-ENCSYFKRVIESTAVSTAEAQ----------------
        MKI GE    KTP++A  +LKNHP  +L ES+ VK  G +A+P E   +L PG LYFLVE+P +N +   R + S    +A+ +                
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSPG-LYFLVEIP-ENCSYFKRVIESTAVSTAEAQ----------------

Query:  LKQRRRKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMAVPRRCAQNGGR
        LKQ+   G     G +RV++RV +AEV+KL++ CKDE+ AAE+++ L+        +NGGR
Subjt:  LKQRRRKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMAVPRRCAQNGGR

A0A4D8YHC7 Uncharacterized protein2.1e-1641.32Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE--NCSYFKRV---IESTAVSTAEAQLKQRR-------
        M ITGE    KTP+QA ++L+NHP H+L  SD V   G +AQP E  H L P  LYFLVE P        +RV   +  TA    E+ +  RR       
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE--NCSYFKRV---IESTAVSTAEAQLKQRR-------

Query:  -RKGLEL-EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM-----AVPRRCAQNGGRIRRL
         R    + E G +RVR+R+RKAEV+KL+ E KD +  AE+++GL M     A   R    GG  R L
Subjt:  -RKGLEL-EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM-----AVPRRCAQNGGRIRRL

A0A4S4D9W7 Uncharacterized protein1.2e-1639.87Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE---------------NCSYFKR----------VIEST
        MKI GE   FKTP+QA+ +LK+HP H+L ES+ VK  GI+A+P E    L P  LYFLVE+PE               N S   R          V + T
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPE---------------NCSYFKR----------VIEST

Query:  AVSTAEAQLKQRRRKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMA
         +      + +R+ +    E+G +R+++RV KAEV +++ E KDE+ AAE++LGL MA
Subjt:  AVSTAEAQLKQRRRKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMA

A0A5B7BXL2 Uncharacterized protein2.1e-1640.25Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIP------ENCSYFKRVIESTAVSTAEAQLKQRRR-----
        MKI GE    KTP++A  ++K++P H+L ES+ VK  GI+A+P E+Q  L P  LYFLVE+P      ++    +  I  +A    E+ +  RR      
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIP------ENCSYFKRVIESTAVSTAEAQLKQRRR-----

Query:  ----KGLELED-GVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMAVPRRCAQNGG
            K + +E+ G LRV++R+ KAEV KL+ E KDE+ AAE+++GL MA       NGG
Subjt:  ----KGLELED-GVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMAVPRRCAQNGG

A0A7J7H1M0 Uncharacterized protein2.8e-1641.94Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPENCSYFK--RV----IESTAVSTAEAQLKQRR------
        MKI GE   FKTP+QA+ +LK+HP H+L ES+ VK  GI+A+P E    L P  LYFLVE+PE     K  RV    I  +A    E+ +  RR      
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIPENCSYFK--RV----IESTAVSTAEAQLKQRR------

Query:  ----------RKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMA
                   +    E+G +R+++RV KAEV +++ E KDE+ AAE++LGL MA
Subjt:  ----------RKGLELEDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMA

SwissProt top hitse value%identityAlignment
Q6NLC8 Uncharacterized protein At1g664801.7e-1031.98Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIP-----------ENCSYFKRVIESTAVSTAEA--QLKQR
        MKI GE    KTP+ A+ +  ++P ++L +S  VK  G++++P E    L P   YFLVE+P           EN   ++RV+    V   E    L   
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIP-----------ENCSYFKRVIESTAVSTAEA--QLKQR

Query:  RRK---------------GLELEDGVLRVRIRVRKAEVDKLVRE-CKDESAAAERLLGLFMAVPRRCAQNGG
        RR                G EL  G   VR+R+ ++++ KL+ E   D SA AE++LG++M    R  + GG
Subjt:  RRK---------------GLELEDGVLRVRIRVRKAEVDKLVRE-CKDESAAAERLLGLFMAVPRRCAQNGG

Arabidopsis top hitse value%identityAlignment
AT1G66480.1 plastid movement impaired 21.2e-1131.98Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIP-----------ENCSYFKRVIESTAVSTAEA--QLKQR
        MKI GE    KTP+ A+ +  ++P ++L +S  VK  G++++P E    L P   YFLVE+P           EN   ++RV+    V   E    L   
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSP-GLYFLVEIP-----------ENCSYFKRVIESTAVSTAEA--QLKQR

Query:  RRK---------------GLELEDGVLRVRIRVRKAEVDKLVRE-CKDESAAAERLLGLFMAVPRRCAQNGG
        RR                G EL  G   VR+R+ ++++ KL+ E   D SA AE++LG++M    R  + GG
Subjt:  RRK---------------GLELEDGVLRVRIRVRKAEVDKLVRE-CKDESAAAERLLGLFMAVPRRCAQNGG

AT1G71015.1 unknown protein3.5e-1132.14Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNL-SPGLYFLVEIPENCSYF--KRVIESTAVSTAE--AQLKQRRRKGLEL--
        M I GE    KTP++A T++K+ P H+L ES+ VK LGI+A+P E   NL S  +YF+VE+P        +RV     +S  E    LK  RR   +L  
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNL-SPGLYFLVEIPENCSYF--KRVIESTAVSTAE--AQLKQRRRKGLEL--

Query:  ----------EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGL-FMAVP-------RRCAQNGGR
                  E  V  V++++ K +++KL +E +  S  + ++  L  + +P       +   +NGGR
Subjt:  ----------EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGL-FMAVP-------RRCAQNGGR

AT2G01340.1 Encodes a protein whose expression is responsive to nematode infection.4.0e-1536.6Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNL-SPGLYFLVEIPENCSYFKRVIESTAVSTAE--AQLKQRRRKGLEL----
        MKI GE    KTP+ A+ +LK+ P H+L +S+ VK  G +A+P E +  L +  LYF+VE  + C   +RV     VS  E    L   RR   +L    
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNL-SPGLYFLVEIPENCSYFKRVIESTAVSTAE--AQLKQRRRKGLEL----

Query:  ----------EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMAVPRR
                  E  V RV++R+ KAE++KLV+E   E+ A +++  LFMA  R+
Subjt:  ----------EDGVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFMAVPRR

AT5G37840.1 BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1)1.0e-1029.8Show/hide
Query:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSPG-LYFLVEIP----ENCSYFKRVIESTAVSTAEAQLKQRRRKGLELED
        MKI G+I   KTP+ A    K +P  +L +S+ VK LG++A+P E    L P   YFLV++P     N   ++RV+       A+ +L+        + D
Subjt:  MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSPG-LYFLVEIP----ENCSYFKRVIESTAVSTAEAQLKQRRRKGLELED

Query:  ---------------GVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM
                       G  RVR+R+ ++++ KL+ E  D S  A +++  +M
Subjt:  ---------------GVLRVRIRVRKAEVDKLVRECKDESAAAERLLGLFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATAACAGGAGAAATCAAAATCTTCAAAACCCCAATTCAAGCTCAAACCATTCTCAAAAACCATCCTCACCATCTTTTGTTTGAATCCGATGAAGTTAAGGTTCT
CGGAATTCAAGCTCAGCCATGGGAGCTGCAGCACAATCTATCACCAGGGCTCTATTTTCTGGTGGAGATCCCTGAGAATTGCAGTTATTTCAAAAGGGTCATTGAGTCGA
CTGCCGTGAGCACTGCCGAGGCCCAGCTGAAGCAGCGGCGGAGGAAGGGTTTGGAATTGGAAGATGGGGTTTTGAGAGTGAGAATTAGGGTTCGGAAGGCGGAGGTGGAC
AAGTTGGTGAGGGAATGTAAGGATGAGTCCGCGGCGGCGGAGAGGCTTCTTGGTCTGTTCATGGCAGTGCCACGGCGGTGTGCGCAGAACGGTGGCCGCATTCGACGGCT
CCCACCGCTGCCGGAGCTCAGGTACTTAATTGAGACAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATAACAGGAGAAATCAAAATCTTCAAAACCCCAATTCAAGCTCAAACCATTCTCAAAAACCATCCTCACCATCTTTTGTTTGAATCCGATGAAGTTAAGGTTCT
CGGAATTCAAGCTCAGCCATGGGAGCTGCAGCACAATCTATCACCAGGGCTCTATTTTCTGGTGGAGATCCCTGAGAATTGCAGTTATTTCAAAAGGGTCATTGAGTCGA
CTGCCGTGAGCACTGCCGAGGCCCAGCTGAAGCAGCGGCGGAGGAAGGGTTTGGAATTGGAAGATGGGGTTTTGAGAGTGAGAATTAGGGTTCGGAAGGCGGAGGTGGAC
AAGTTGGTGAGGGAATGTAAGGATGAGTCCGCGGCGGCGGAGAGGCTTCTTGGTCTGTTCATGGCAGTGCCACGGCGGTGTGCGCAGAACGGTGGCCGCATTCGACGGCT
CCCACCGCTGCCGGAGCTCAGGTACTTAATTGAGACAAAATGA
Protein sequenceShow/hide protein sequence
MKITGEIKIFKTPIQAQTILKNHPHHLLFESDEVKVLGIQAQPWELQHNLSPGLYFLVEIPENCSYFKRVIESTAVSTAEAQLKQRRRKGLELEDGVLRVRIRVRKAEVD
KLVRECKDESAAAERLLGLFMAVPRRCAQNGGRIRRLPPLPELRYLIETK