; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004365 (gene) of Snake gourd v1 genome

Gene IDTan0004365
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG02:32299137..32301348
RNA-Seq ExpressionTan0004365
SyntenyTan0004365
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141907.1 chlorophyll a-b binding protein CP24 10A, chloroplastic [Momordica charantia]6.1e-13794.49Show/hide
Query:  ATSGALLNGLGSPFLRGG-SRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS ALLNG GSPFLRGG SRSH LL GAR  VNVVGSRKLVIVAAAQPKKSWLPGVRGGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSGALLNGLGSPFLRGG-SRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGSLKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022927871.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata]9.4e-13894.49Show/hide
Query:  AATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSGALLNGLGSPFL GGSR+ TLL GAR  VNVV SRKLVIVAAAQPKKSW+P V+GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022988907.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]1.9e-13894.51Show/hide
Query:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGALLNGLGSPFL GGSR+ TLL GAR  VNVV SRKLVIVAAAQPKKSW+P V+GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022993917.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]6.1e-13792.16Show/hide
Query:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGA+LNGLGSPFLRGGSR+ TLL GAR  VNVVGSRKLVIVAAAQPKKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIF+GQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAG++KDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_023531350.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo subsp. pepo]4.7e-13794.09Show/hide
Query:  AATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSGALLNGLGSPFL GGSR+  LL GAR  VNVV SRKLVIVAAAQPKKSW+P V+GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

TrEMBL top hitse value%identityAlignment
A0A5D3DGI0 Chlorophyll a-b binding protein, chloroplastic5.1e-13792.16Show/hide
Query:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGA+LNGLGSPFLRG SR+ TLL GAR  VNVV S KLV++AAAQPKKSW+PGVRGGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIF+GQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1CL59 Chlorophyll a-b binding protein, chloroplastic3.0e-13794.49Show/hide
Query:  ATSGALLNGLGSPFLRGG-SRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS ALLNG GSPFLRGG SRSH LL GAR  VNVVGSRKLVIVAAAQPKKSWLPGVRGGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSGALLNGLGSPFLRGG-SRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGSLKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1EIR2 Chlorophyll a-b binding protein, chloroplastic4.6e-13894.49Show/hide
Query:  AATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        AATSGALLNGLGSPFL GGSR+ TLL GAR  VNVV SRKLVIVAAAQPKKSW+P V+GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  AATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JEC2 Chlorophyll a-b binding protein, chloroplastic9.2e-13994.51Show/hide
Query:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGALLNGLGSPFL GGSR+ TLL GAR  VNVV SRKLVIVAAAQPKKSW+P V+GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSA+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAG+LKDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JU87 Chlorophyll a-b binding protein, chloroplastic3.0e-13792.16Show/hide
Query:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGA+LNGLGSPFLRGGSR+ TLL GAR  VNVVGSRKLVIVAAAQPKKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIF+GQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAG++KDGVYIPD EKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic6.5e-3338.3Show/hide
Query:  GSRSHTLLPGARSAVN----VVGSRKLVI--VAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI
        G+   + L G R  V+     VGSR + +  VAA   +  W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW  +AEL+H RWAM    GI
Subjt:  GSRSHTLLPGARSAVN----VVGSRKLVI--VAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI

Query:  FIGQAWSGI------PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLK
        FI +  + I       W+ AG            TL   +L+L+GW E +RW D   P   + +   P      N    T + GYPGG +FDPLG+     
Subjt:  FIGQAWSGI------PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLK

Query:  DGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFE
                 K++ L+  EIK+ R+AMLA++  +F+
Subjt:  DGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFE

P27524 Chlorophyll a-b binding protein CP24 10A, chloroplastic1.1e-12080.47Show/hide
Query:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSA-VNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
        MA TS A+LNGL S FL GG++S  LL    +A V    + K   V AA  KKSW+P VRGGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
Subjt:  MAATSGALLNGLGSPFLRGGSRSHTLLPGARSA-VNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE

Query:  LIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
        LIHGRWAMAAV+GIF+GQAWSGIPWFEAGADP A+APFSFGTLLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFFDP
Subjt:  LIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        L  AG+L +GVY+PD EKLERLK+AEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  LGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P27525 Chlorophyll a-b binding protein CP24 10B, chloroplastic9.5e-11777.82Show/hide
Query:  MAATSG-ALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAA-QPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA
        M  TS  A+LNGL S FL GG ++  LL GA     V   ++ V+ AAA  PKKSW+P V+ GGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREA
Subjt:  MAATSG-ALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAA-QPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA

Query:  ELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD
        ELIHGRWAMAAV+GIF+GQAWSGIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKFFD
Subjt:  ELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD

Query:  PLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        PL  AG+L +GVY+PD EKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  PLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P36494 Chlorophyll a-b binding protein CP24, chloroplastic4.6e-11980.31Show/hide
Query:  AATSG-ALLNGLGSPFLRGGSRSHTLLPGARSAVNV---VGSRKLVIV-AAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYR
        AATS  A++NG  SPFL GG +S   L    S V       SRKLV+V AAA PKKSW+P V+GGGNF+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYR
Subjt:  AATSG-ALLNGLGSPFLRGGSRSHTLLPGARSAVNV---VGSRKLVIV-AAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYR

Query:  EAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF
        EAELIHGRWAM AV+GIF+GQAW+GIPWFEAGADP AVAPFSFGTLLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGKF
Subjt:  EAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FDPL  AG++ +GVY PD +KLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic5.5e-3241.33Show/hide
Query:  WLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQL
        W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI I +            W++AG+           TL   Q+
Subjt:  WLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQL

Query:  LLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEA
        +LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  LLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEA

Arabidopsis top hitse value%identityAlignment
AT1G15820.1 light harvesting complex photosystem II subunit 61.5e-12079.61Show/hide
Query:  ATSGALLNGLGSPFLRGGSRSHT-LLPGARSAVNVVGSRKLVI-VAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        A SGA+L+GLGS FL GG R  T L  G  +    VG + L++  AAAQPKKSW+P V+GGGNF+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  ATSGALLNGLGSPFLRGGSRSHT-LLPGARSAVNVVGSRKLVI-VAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAV+GIF+GQAWSG+ WFEAGA P A+APFSFG+LLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAENFAN TG+QGYPGG+FFDPL
Subjt:  IHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        G AG  +DGVY PD EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

AT1G19150.1 photosystem I light harvesting complex gene 63.9e-3341.33Show/hide
Query:  WLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQL
        W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV GI I +            W++AG+           TL   Q+
Subjt:  WLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAW------SGIPWFEAGADPSAVAPFSFGTLLGTQL

Query:  LLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEA
        +LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  LLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.1 photosystem I light harvesting complex gene 56.7e-3339.26Show/hide
Query:  LLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM
        L  G+   FL     + +++    S+V   G    +    A  + +WLPG+        P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM
Subjt:  LLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM

Query:  AAVVGIFIGQ--AWSGI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
          V GI        +GI     W+EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG
Subjt:  AAVVGIFIGQ--AWSGI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEA
         A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.2 photosystem I light harvesting complex gene 56.7e-3339.26Show/hide
Query:  LLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM
        L  G+   FL     + +++    S+V   G    +    A  + +WLPG+        P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM
Subjt:  LLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM

Query:  AAVVGIFIGQ--AWSGI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
          V GI        +GI     W+EAGA     A  S  TL+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG
Subjt:  AAVVGIFIGQ--AWSGI----PWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEA
         A          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  FAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEA

AT3G61470.1 photosystem I light harvesting complex gene 23.3e-3239.71Show/hide
Query:  VAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGI------PWFEAGADPSAVAPFS
        VAA   +  W PG         PEWLDGSLPGD+GFDPLGL  DP  LKW  +AE++H RWAM    GIFI +  + I       W+ AG          
Subjt:  VAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGI------PWFEAGADPSAVAPFS

Query:  FGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLI
          TL   +L+L+GW E +RW D   P S + +   P      N    T + GYPGG +FDPLG+              KL+ L+  EIK+ R+AMLA++ 
Subjt:  FGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLERLKLAEIKHARIAMLAMLI

Query:  FYFE
         +F+
Subjt:  FYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAACTTCTGGTGCTCTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGGTAGCAGAAGCCACACCTTGCTACCCGGAGCAAGAAGCGCTGTCAATGTCGT
CGGCTCTCGCAAGCTTGTCATTGTCGCCGCTGCTCAGCCCAAGAAGTCCTGGCTCCCTGGCGTTAGGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCAC
TTCCAGGCGACTACGGCTTCGACCCACTGGGGTTGGGAAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTG
GTCGGAATCTTCATCGGCCAGGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCTGCAGTCGCTCCATTCTCCTTCGGAACACTGCTCGGAACCCAGCT
TCTGCTAATGGGATGGGTCGAGAGCAAGCGATGGGTCGATTTCTTCAACCCAGAGTCTCAATCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAA
ACGCAACCGGAGAACAGGGGTACCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTCTAAAGGATGGAGTTTACATTCCAGACGCGGAGAAGTTGGAGAGA
TTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCTCTTGGATTGTAA
mRNA sequenceShow/hide mRNA sequence
CCTCCTTTCAAAGAGCCTAGATTTTGATCTTTAGCATCGTATTTGTAATTGAAAAAAAGTAAAAATGGATTGTCCCCTCTAAATTTTTGGAAAAGATAATTATCTTTTTA
ACCCAAGGGAAGATGCTGGGCATTAATTTCCCTAAAAGGATTTCTCTTTCAAAGTAGGAAGTTGGGAGTGAAACATGAGGCTGAAAAAGGGCTAAGGAGAGAGCGATCGT
CCACGTGGTTGGCAGCCAAGTGGAATAGCGGATGAAGAACTTGTTTCTCATTGGTCCGAAATCTATCCAACACCCTCCCTCAGATTTCCCCTCCAGATTCTCATCAACAC
ACATGGCTCCATTTAAACCCACAATTCAATTCACAATATCTCCCACACACCCTTCTCAATAAAATCATAAAACATATTTCATTACATACCTGAAACTTCCCATCTCAGAA
GAAGCCATGGCTGCAACTTCTGGTGCTCTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGGTAGCAGAAGCCACACCTTGCTACCCGGAGCAAGAAGCGCTGTCAA
TGTCGTCGGCTCTCGCAAGCTTGTCATTGTCGCCGCTGCTCAGCCCAAGAAGTCCTGGCTCCCTGGCGTTAGGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCGATG
GCTCACTTCCAGGCGACTACGGCTTCGACCCACTGGGGTTGGGAAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTAATCCACGGGCGGTGGGCAATGGCA
GCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCTGCAGTCGCTCCATTCTCCTTCGGAACACTGCTCGGAAC
CCAGCTTCTGCTAATGGGATGGGTCGAGAGCAAGCGATGGGTCGATTTCTTCAACCCAGAGTCTCAATCCGTCGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACT
TCGCAAACGCAACCGGAGAACAGGGGTACCCCGGAGGAAAATTCTTCGATCCGTTGGGATTTGCAGGAAGTCTAAAGGATGGAGTTTACATTCCAGACGCGGAGAAGTTG
GAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCGTTGGGTGCTCTTGGATT
GTAAAAAAAATTGTTGATGTGACGGAAAAATTGTTCATATTTTCACTAAAAAAAGACTTTGTGAATGGATTGAACATGTGTGGATGATTTTGAGATAGATTTTGAAGGGG
TTTTGTTGGAGCTCTAACTCAAAATTCAAAATTGAGTGTGCGTTTTGCCTTCTTTCAATTTTTTCGTTGCTTGCATTGTATATGCTATATCTATTGATATCCAAACTTAA
GAAAGCACTTTCCTAATCAAAATCATTCAGATTAGAGGATGATAAAATATTCACAAAATAATTTGAGTTGATACTAGTGAGGGAAGTTTTATCTTTTTGTTAATTTCCAT
TCATCTTACAACTCTTGAATATTGTTGATTCATTTTCTATAAAATGCCTTAGAGTGGAACCATTTGGTGTAGCATTCCCCAAATTCAAGCAAATTTTCTCTGGATCTCTA
TTTTTCATTACAATTATTCTTTTAGGAGGGCCTTTTCCCACTCATATTCTACTTTGTGAAGTTCATTGCTATTTCTTCCTGTTTTGAGATTAGTCATTGCCTTTTAGGCT
CTTGAGGAGGC
Protein sequenceShow/hide protein sequence
MAATSGALLNGLGSPFLRGGSRSHTLLPGARSAVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
VGIFIGQAWSGIPWFEAGADPSAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDAEKLER
LKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL