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Tan0004371 (gene) of Snake gourd v1 genome

Gene IDTan0004371
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein BIC2
Genome locationLG05:995980..996768
RNA-Seq ExpressionTan0004371
SyntenyTan0004371
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570486.1 Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3175.96Show/hide
Query:  MIPQNCSDSE-------TNSSAAVAVGGSAGDSGGGVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAA
        M+P N SDS         ++ AA  V GS GDS GG EKLK CCG RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAA RIASARASL A
Subjt:  MIPQNCSDSE-------TNSSAAVAVGGSAGDSGGGVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAA

Query:  EGRR
        EGRR
Subjt:  EGRR

KAG7010351.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3174.07Show/hide
Query:  MIPQNCSDSE-------TNSSAAVAVGGSAGDSGGGVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAA
        M+P N SDS         ++ AA  V GS GDS GG EK K CCG RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAA RIASARASL A
Subjt:  MIPQNCSDSE-------TNSSAAVAVGGSAGDSGGGVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAA

Query:  EGRRASSR
        EGRR  SR
Subjt:  EGRRASSR

KGN46948.1 hypothetical protein Csa_020684 [Cucumis sativus]4.4e-3170.49Show/hide
Query:  MIPQNCSDSETNSSAAVA--------VGGSAGDSGGGV--EKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS
        M+P N SD++ + S   +         GGS GDS GGV  EKLK C GVRERLKRHREEVAGKV VPEKWGKEELLKDWIDYSAFDRILAA RIASARAS
Subjt:  MIPQNCSDSETNSSAAVA--------VGGSAGDSGGGV--EKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS

Query:  LAAEGRRASSRSRPPLRVESRC
        LAAEG+R S RS    RVESRC
Subjt:  LAAEGRRASSRSRPPLRVESRC

TYK18920.1 uncharacterized protein E5676_scaffold28061G00010 [Cucumis melo var. makuwa]3.2e-2970.49Show/hide
Query:  MIPQNCS---DSETNSSAAVA-----VGGSAGDSGG--GVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS
        MIP N S   DS +  ++A A      G S GDS    G EKLK CCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAA RIASARAS
Subjt:  MIPQNCS---DSETNSSAAVA-----VGGSAGDSGG--GVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS

Query:  LAAEGRRASSRSRPPLRVESRC
        LAAEG++  SR     RVESRC
Subjt:  LAAEGRRASSRSRPPLRVESRC

XP_022153004.1 protein BIC2 [Momordica charantia]3.7e-3086.67Show/hide
Query:  GGGVEKL----KSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAEGRRASSRSRPPLRVESRC
        G GVEKL    KS CGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEGRRA++ SRP LRVESRC
Subjt:  GGGVEKL----KSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAEGRRASSRSRPPLRVESRC

TrEMBL top hitse value%identityAlignment
A0A0A0KBS7 Uncharacterized protein2.1e-3170.49Show/hide
Query:  MIPQNCSDSETNSSAAVA--------VGGSAGDSGGGV--EKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS
        M+P N SD++ + S   +         GGS GDS GGV  EKLK C GVRERLKRHREEVAGKV VPEKWGKEELLKDWIDYSAFDRILAA RIASARAS
Subjt:  MIPQNCSDSETNSSAAVA--------VGGSAGDSGGGV--EKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS

Query:  LAAEGRRASSRSRPPLRVESRC
        LAAEG+R S RS    RVESRC
Subjt:  LAAEGRRASSRSRPPLRVESRC

A0A1S3C9F3 uncharacterized protein LOC1034979453.4e-2969.67Show/hide
Query:  MIPQNCS---DSETNSSAAVA-----VGGSAGDSGG--GVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS
        MIP N S   DS +  ++A A      G S GDS    G EKLK CCGVRERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAA RIASARAS
Subjt:  MIPQNCS---DSETNSSAAVA-----VGGSAGDSGG--GVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS

Query:  LAAEGRRASSRSRPPLRVESRC
        LAAEG++  SR     RVESRC
Subjt:  LAAEGRRASSRSRPPLRVESRC

A0A5A7STT7 Uncharacterized protein3.4e-2969.67Show/hide
Query:  MIPQNCS---DSETNSSAAVA-----VGGSAGDSGG--GVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS
        MIP N S   DS +  ++A A      G S GDS    G EKLK CCGVRERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAA RIASARAS
Subjt:  MIPQNCS---DSETNSSAAVA-----VGGSAGDSGG--GVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS

Query:  LAAEGRRASSRSRPPLRVESRC
        LAAEG++  SR     RVESRC
Subjt:  LAAEGRRASSRSRPPLRVESRC

A0A5D3D5X1 Uncharacterized protein1.5e-2970.49Show/hide
Query:  MIPQNCS---DSETNSSAAVA-----VGGSAGDSGG--GVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS
        MIP N S   DS +  ++A A      G S GDS    G EKLK CCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAA RIASARAS
Subjt:  MIPQNCS---DSETNSSAAVA-----VGGSAGDSGG--GVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARAS

Query:  LAAEGRRASSRSRPPLRVESRC
        LAAEG++  SR     RVESRC
Subjt:  LAAEGRRASSRSRPPLRVESRC

A0A6J1DHR5 protein BIC21.8e-3086.67Show/hide
Query:  GGGVEKL----KSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAEGRRASSRSRPPLRVESRC
        G GVEKL    KS CGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEGRRA++ SRP LRVESRC
Subjt:  GGGVEKL----KSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAEGRRASSRSRPPLRVESRC

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC15.1e-1461.9Show/hide
Query:  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAEGRRASSRS
        RERLK+HR E+AG+V +PE WG+EELLKDWID S FD  L  + I+SAR +L  E RRA+S S
Subjt:  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAEGRRASSRS

Q9M280 Protein BIC23.9e-1460.53Show/hide
Query:  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAE-GRRASSR-SRPP-LRVESRC
        R+RLKRHREEVAGKV +P+ WGKE LL  W+D+S FD    +S+I SARA+L A+ G  A +R SRP  LRVES C
Subjt:  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAE-GRRASSR-SRPP-LRVESRC

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein2.8e-1560.53Show/hide
Query:  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAE-GRRASSR-SRPP-LRVESRC
        R+RLKRHREEVAGKV +P+ WGKE LL  W+D+S FD    +S+I SARA+L A+ G  A +R SRP  LRVES C
Subjt:  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAE-GRRASSR-SRPP-LRVESRC

AT3G52740.1 unknown protein3.6e-1561.9Show/hide
Query:  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAEGRRASSRS
        RERLK+HR E+AG+V +PE WG+EELLKDWID S FD  L  + I+SAR +L  E RRA+S S
Subjt:  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAEGRRASSRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCTCAAAATTGCTCTGATTCCGAAACAAACAGCTCTGCAGCCGTCGCCGTTGGTGGGTCGGCCGGAGATTCGGGCGGCGGCGTTGAGAAATTGAAGAGTTGTTG
TGGGGTTCGAGAGCGGCTGAAGAGGCACCGTGAGGAGGTGGCCGGGAAAGTGACGGTGCCAGAGAAATGGGGGAAAGAGGAGCTGCTAAAGGATTGGATTGACTACTCGG
CGTTCGACAGAATCTTGGCCGCCAGCAGAATTGCGTCGGCGAGGGCGTCGCTTGCGGCGGAGGGAAGGCGGGCCAGTTCCCGTTCACGGCCGCCGTTGAGGGTAGAAAGT
AGGTGTTGA
mRNA sequenceShow/hide mRNA sequence
GGAAAGTGGTATGAAATTTTTTTCTCCAAAACTCCATGTCCCTTCTCAACGTAGCTAGTCCATTCACCATTCAAATGTCGATAAAATAGTTTCTTTTTTCTTTTTAAGAA
AAAAAAAAAAAGTTTGACGTGTACACTAACTCCCCACACAACCCTTCTATTTAATTATTGTTTGTGAGTCCCAAAATTCAACAGACCAATCGCCATGATTCCTCAAAATT
GCTCTGATTCCGAAACAAACAGCTCTGCAGCCGTCGCCGTTGGTGGGTCGGCCGGAGATTCGGGCGGCGGCGTTGAGAAATTGAAGAGTTGTTGTGGGGTTCGAGAGCGG
CTGAAGAGGCACCGTGAGGAGGTGGCCGGGAAAGTGACGGTGCCAGAGAAATGGGGGAAAGAGGAGCTGCTAAAGGATTGGATTGACTACTCGGCGTTCGACAGAATCTT
GGCCGCCAGCAGAATTGCGTCGGCGAGGGCGTCGCTTGCGGCGGAGGGAAGGCGGGCCAGTTCCCGTTCACGGCCGCCGTTGAGGGTAGAAAGTAGGTGTTGAGATGGAA
ATCTCTGTTTAAATTTACTTTTAGCCTCTTTGAATTCATTAATGATTAATGTCATAGAGAAGCGAAAACACAGATCATAAAATTCATACTTGGGCCTTCGTTTTGTGAGT
GATTGATTTAATTTGTGTGTAAATCTAAAGAGCCTTATGGAATAATTTTATGTTGGGTTTATATTTTTATTTGCTTTTATAGTCCATGTAATTTCCTTTTATTTATTGGA
GGTTGCAATTAATTTCTCA
Protein sequenceShow/hide protein sequence
MIPQNCSDSETNSSAAVAVGGSAGDSGGGVEKLKSCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAASRIASARASLAAEGRRASSRSRPPLRVES
RC