CuGenDBv2

Gene ID	Tan0004383
Organism	Trichosanthes anguina (Snake gourd v1)
Description	40S ribosomal protein S26
Genome location	LG11:2579028..2581066
RNA-Seq Expression	Tan0004383
Synteny	Tan0004383
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0019430 - removal of superoxide radicals (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0004784 - superoxide dismutase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000892 - Ribosomal protein S26e IPR038551 - Ribosomal protein S26e superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6602587.1 40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-64

96.92

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAG-GAPPPR
        FIRRRDD+PKPGQPG APRVGAG GAPPPR
Subjt:  FIRRRDDLPKPGQPGQAPRVGAG-GAPPPR

XP_004138397.1 40S ribosomal protein S26-3 [Cucumis sativus]

3.0e-63

96.85

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAGGAPP
        FIRRRDD PKPGQ GQ PRVGAGGAPP
Subjt:  FIRRRDDLPKPGQPGQAPRVGAGGAPP

XP_008456772.1 PREDICTED: 40S ribosomal protein S26-3-like [Cucumis melo]

7.1e-65

98.43

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAGGAPP
        FIRRRDD PKPGQPGQ PRVGAGGAPP
Subjt:  FIRRRDDLPKPGQPGQAPRVGAGGAPP

XP_022923523.1 40S ribosomal protein S26-3-like [Cucurbita moschata]

5.4e-65

97.69

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAG-GAPPPR
        FIRRRDD+PKPGQPGQAPRVGAG GAPPPR
Subjt:  FIRRRDDLPKPGQPGQAPRVGAG-GAPPPR

XP_038884330.1 40S ribosomal protein S26-3-like [Benincasa hispida]

1.4e-65

99.21

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAGGAPP
        FIRRRDD PKPGQPGQAPRVGAGGAPP
Subjt:  FIRRRDDLPKPGQPGQAPRVGAGGAPP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C4P8 40S ribosomal protein S26

3.4e-65

98.43

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAGGAPP
        FIRRRDD PKPGQPGQ PRVGAGGAPP
Subjt:  FIRRRDDLPKPGQPGQAPRVGAGGAPP

A0A5A7UA01 40S ribosomal protein S26

3.4e-65

98.43

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAGGAPP
        FIRRRDD PKPGQPGQ PRVGAGGAPP
Subjt:  FIRRRDDLPKPGQPGQAPRVGAGGAPP

A0A6J1E9V7 40S ribosomal protein S26

2.6e-65

97.69

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAG-GAPPPR
        FIRRRDD+PKPGQPGQAPRVGAG GAPPPR
Subjt:  FIRRRDDLPKPGQPGQAPRVGAG-GAPPPR

A0A6J1JRW7 40S ribosomal protein S26

2.6e-65

97.69

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAG-GAPPPR
        FIRRRDD+PKPGQPGQAPRVGAG GAPPPR
Subjt:  FIRRRDDLPKPGQPGQAPRVGAG-GAPPPR

A0A6J1K0V7 40S ribosomal protein S26

1.4e-63

94.62

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAGGAPPPRA
        FIRRR+D PKPGQPGQAPRVGAG   PPRA
Subjt:  FIRRRDDLPKPGQPGQAPRVGAGGAPPPRA

SwissProt top hits

e value

%identity

Alignment

O45499 40S ribosomal protein S26

5.9e-38

66.95

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAP
        F  +R    +PG PG  P
Subjt:  FIRRRDDLPKPGQPGQAP

P49206 40S ribosomal protein S26-1

2.6e-54

82.31

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPR-VGAGGAPPPR
        F RR++D PKPGQPGQAPR  G G A  PR
Subjt:  FIRRRDDLPKPGQPGQAPR-VGAGGAPPPR

P49216 40S ribosomal protein S26

1.6e-48

75.19

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R PP+R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQP-GQAPRVGAGGAPPP
        F RRR+D P+  +P G AP  G   AP P
Subjt:  FIRRRDDLPKPGQP-GQAPRVGAGGAPPP

Q8LPJ7 40S ribosomal protein S26-2

1.0e-53

81.06

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPR---VGAGGAPPPR
        F RR++D PKPGQPGQAPR    GA  A  PR
Subjt:  FIRRRDDLPKPGQPGQAPR---VGAGGAPPPR

Q9LYK9 40S ribosomal protein S26-3

1.5e-54

81.54

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAGGAPPPRA
        F RR++D PKP QPGQAPR   G    PRA
Subjt:  FIRRRDDLPKPGQPGQAPRVGAGGAPPPRA

Arabidopsis top hits

e value

%identity

Alignment

AT2G40510.1 Ribosomal protein S26e family protein

7.1e-55

81.06

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPR---VGAGGAPPPR
        F RR++D PKPGQPGQAPR    GA  A  PR
Subjt:  FIRRRDDLPKPGQPGQAPR---VGAGGAPPPR

AT2G40590.1 Ribosomal protein S26e family protein

1.9e-55

82.31

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPR-VGAGGAPPPR
        F RR++D PKPGQPGQAPR  G G A  PR
Subjt:  FIRRRDDLPKPGQPGQAPR-VGAGGAPPPR

AT3G56340.1 Ribosomal protein S26e family protein

1.1e-55

81.54

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDLPKPGQPGQAPRVGAGGAPPPRA
        F RR++D PKP QPGQAPR   G    PRA
Subjt:  FIRRRDDLPKPGQPGQAPRVGAGGAPPPRA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGACTTTCAAGCGGAGGAATGGCGGTCGCAACAAGCATGGACGCGGACACGTGAAATTCATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGACAAAGCCATCAA
GAGATTCCTTGTTAGGAACATTGTGGAGCAGGCAGCTGTTAGGGATGTTCAAGAAGCGTGTGTCTATGATCAATACACTCTTCCTAAGCTATATGCTAAGATGCAGTACT
GTGTTTCCTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCACGCACTGACAGGAGGAACCGTGAGCCTCCACAGCGCTTTATTAGACGCAGGGATGATCTGCCAAAG
CCTGGACAGCCAGGACAGGCCCCTCGTGTTGGAGCTGGCGGAGCACCTCCACCCCGTGCTTGA

mRNA sequence

Show/hide mRNA sequence

ATTTCATTTGCTAGGTCACCTTCTCCTCCTCTCCATATAAAAGGATCACTACCACCCTTTCAGAAACCCTAATTCAGCCGACGAGCTTTCTGATTCTCTCTGGGTCGATC
GTCCATCTGAAAAACTAGAACCATGACTTTCAAGCGGAGGAATGGCGGTCGCAACAAGCATGGACGCGGACACGTGAAATTCATCCGCTGCTCCAACTGCGGCAAATGCT
GCCCCAAGGACAAAGCCATCAAGAGATTCCTTGTTAGGAACATTGTGGAGCAGGCAGCTGTTAGGGATGTTCAAGAAGCGTGTGTCTATGATCAATACACTCTTCCTAAG
CTATATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCACGCACTGACAGGAGGAACCGTGAGCCTCCACAGCGCTTTATTAG
ACGCAGGGATGATCTGCCAAAGCCTGGACAGCCAGGACAGGCCCCTCGTGTTGGAGCTGGCGGAGCACCTCCACCCCGTGCTTGAAGGAACCTCTTATGTGCTGTTTAAT
TTCCTCATGGTTGCTCAAATTTCGTGGACTTCAATTTCATTTAGGATTTTTCTATATATTTTGAGGGTTTTGTTTTTACGAGTATTGAATTATGCTGTACTTCTGAAATC
TGATCAATTTTTGTTTTAGCAAGGTCTTGTTGTCGCGACTCGATCCATCTATCCTGTCTCTTAAATCTCTTCCACATCTCTTCTACTTATCTGTCCACAATTCATAGCTT
AGTTTAGGTTTAAAAGAAAAAGTAACACAGGGATCTTGTAGCAATATCCAATGTTCTTCTGTTCAGTAGATCTTTTTGAGCTACCCACAGCACACGGTATAAAGCTATCA
CGGA

Protein sequence

Show/hide protein sequence

MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDLPK
PGQPGQAPRVGAGGAPPPRA

Tan0004383 (gene) of Snake gourd v1 genome