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Tan0004385 (gene) of Snake gourd v1 genome

Gene IDTan0004385
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationLG01:4229821..4230694
RNA-Seq ExpressionTan0004385
SyntenyTan0004385
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146895.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]1.8e-3866.87Show/hide
Query:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG---VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYG
        MK+PS      LFF+LF +T+SS VS G + RKLLN PDMS G P+GGGG    NPTG YG+ HGPNWDYNWGWGS PG GWGFGSGSGRSPTGFGKGYG
Subjt:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG---VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNSG----VDGYGGSSASKYRSPTTTKDNSKHG
        YGFGSG+GSG G G G GSGG  G G+G GSGYGNSG      GYGG S  +YRSP TT+D ++ G
Subjt:  YGFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNSG----VDGYGGSSASKYRSPTTTKDNSKHG

XP_016901488.1 PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis melo]1.6e-3967.88Show/hide
Query:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG--VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGY
        MK+PS      LFF+LF +T+SS VSG  + RKLLN PDMS G PNGGGG   NPTG YG+ H PNWDYNWGWGS PG GWGFGSGSGRSPTGFGKGYGY
Subjt:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG--VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGY

Query:  GFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNS----GVDGYGGSSASKYRSPTTTKDNSKHG
        GFGSG+GSG G G G GSGG  G G+G GSGYGNS    G  GYGG S  +YRSPTTT+D ++ G
Subjt:  GFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNS----GVDGYGGSSASKYRSPTTTKDNSKHG

XP_022984415.1 glycine-rich cell wall structural protein 2-like [Cucurbita maxima]6.4e-4169.43Show/hide
Query:  MKKPSTIFLFFILFFITASSAVSGGISGRKLLNVPDMSGGPNGGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGF--GS
        MKKPST  L F+L FITASSA+S     RKLLN P MS GPNG GG NPTGGYG++HGPNW+YNWGWGS PG GWG+GSGSGRS  GFGKGYGYGF  GS
Subjt:  MKKPSTIFLFFILFFITASSAVSGGISGRKLLNVPDMSGGPNGGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGF--GS

Query:  GTGSGWGSGSGYGSGGGAGFGFGSGYGNSGVDGYGG----SSASKYRSPTTTKDNSK
        G+GSGWG GSG G   G G+GFGSGYGNSG  G GG    SS S+YRS T ++D SK
Subjt:  GTGSGWGSGSGYGSGGGAGFGFGSGYGNSGVDGYGG----SSASKYRSPTTTKDNSK

XP_023549488.1 putative glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo]6.0e-3970.78Show/hide
Query:  MKKPSTIFLFFILFFITASSAVSGGISGRKLLNVPDMSGGPNGGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGFGSGT
        MKKPST  L F+L FITASSAVS     RKLLN P MS GPNG GG NPTGGYG++HGPNW+YNWGWGS PG GWG+GSGSGRS  GFGKGYGYGFGSG+
Subjt:  MKKPSTIFLFFILFFITASSAVSGGISGRKLLNVPDMSGGPNGGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGFGSGT

Query:  GSGWGSGSGYGSGGG----AGFGFGSGYGNSGVDGYGG----SSASKYRSPTTT
        GS  GSG GYGSGGG    +G+GFGSGYGNSG  G GG    SS S+YRS T +
Subjt:  GSGWGSGSGYGSGGG----AGFGFGSGYGNSGVDGYGG----SSASKYRSPTTT

XP_038899364.1 glycine-rich cell wall structural protein 2-like [Benincasa hispida]3.5e-3969.33Show/hide
Query:  MKKPST---IFLFFILFFITA-SSAVSGGISGRKLLNVPDMS-GGPN-GGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGY
        MKKPST   + LFF+LF +TA SS VSG  + RKLLN PDMS G PN GGGG NPTG YG+AHGPNWDYNWGWGS PG GWG+GSGSGRSPTGFGKGYGY
Subjt:  MKKPST---IFLFFILFFITA-SSAVSGGISGRKLLNVPDMS-GGPN-GGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGY

Query:  GFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNSGVD----GYGGSSASKYRSPTTTKDNSK
        G+G G+GSG G G G GSGG  G G+G GSGYGNSG +    GYGG +  +YRSPTTTKD ++
Subjt:  GFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNSGVD----GYGGSSASKYRSPTTTKDNSK

TrEMBL top hitse value%identityAlignment
A0A0A0KXP2 Uncharacterized protein8.5e-3966.87Show/hide
Query:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG---VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYG
        MK+PS      LFF+LF +T+SS VS G + RKLLN PDMS G P+GGGG    NPTG YG+ HGPNWDYNWGWGS PG GWGFGSGSGRSPTGFGKGYG
Subjt:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG---VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNSG----VDGYGGSSASKYRSPTTTKDNSKHG
        YGFGSG+GSG G G G GSGG  G G+G GSGYGNSG      GYGG S  +YRSP TT+D ++ G
Subjt:  YGFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNSG----VDGYGGSSASKYRSPTTTKDNSKHG

A0A1S4DZT0 glycine-rich cell wall structural protein 27.7e-4067.88Show/hide
Query:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG--VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGY
        MK+PS      LFF+LF +T+SS VSG  + RKLLN PDMS G PNGGGG   NPTG YG+ H PNWDYNWGWGS PG GWGFGSGSGRSPTGFGKGYGY
Subjt:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG--VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGY

Query:  GFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNS----GVDGYGGSSASKYRSPTTTKDNSKHG
        GFGSG+GSG G G G GSGG  G G+G GSGYGNS    G  GYGG S  +YRSPTTT+D ++ G
Subjt:  GFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNS----GVDGYGGSSASKYRSPTTTKDNSKHG

A0A5A7TRC6 Glycine-rich cell wall structural protein 27.7e-4067.88Show/hide
Query:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG--VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGY
        MK+PS      LFF+LF +T+SS VSG  + RKLLN PDMS G PNGGGG   NPTG YG+ H PNWDYNWGWGS PG GWGFGSGSGRSPTGFGKGYGY
Subjt:  MKKPSTIF---LFFILFFITASSAVSGGISGRKLLNVPDMS-GGPNGGGG--VNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGY

Query:  GFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNS----GVDGYGGSSASKYRSPTTTKDNSKHG
        GFGSG+GSG G G G GSGG  G G+G GSGYGNS    G  GYGG S  +YRSPTTT+D ++ G
Subjt:  GFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNS----GVDGYGGSSASKYRSPTTTKDNSKHG

A0A6J1FQS0 glycine-rich cell wall structural protein 2-like1.4e-3867.52Show/hide
Query:  MKKPSTIFLFFILFFITASSAVSGGISGRKLLNVPDMSGGPNGGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGF--GS
        MKKPST  L F+L FITASSAVS     RKLLN P MS GPNG GG NPTGGYG++HGPNW+YNWGWGS PG GWG+GSGSGR   GFGKGYGYGF  GS
Subjt:  MKKPSTIFLFFILFFITASSAVSGGISGRKLLNVPDMSGGPNGGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGF--GS

Query:  GTGSGWGSGSGYGSGGGAGFGFGSGYGNSGVDGYGG----SSASKYRSPTTTKDNSK
        G+GSGWG GSG G   G G+GFGSGYGNS   G GG    SS ++Y S T +KD +K
Subjt:  GTGSGWGSGSGYGSGGGAGFGFGSGYGNSGVDGYGG----SSASKYRSPTTTKDNSK

A0A6J1J8K0 glycine-rich cell wall structural protein 2-like3.1e-4169.43Show/hide
Query:  MKKPSTIFLFFILFFITASSAVSGGISGRKLLNVPDMSGGPNGGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGF--GS
        MKKPST  L F+L FITASSA+S     RKLLN P MS GPNG GG NPTGGYG++HGPNW+YNWGWGS PG GWG+GSGSGRS  GFGKGYGYGF  GS
Subjt:  MKKPSTIFLFFILFFITASSAVSGGISGRKLLNVPDMSGGPNGGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGF--GS

Query:  GTGSGWGSGSGYGSGGGAGFGFGSGYGNSGVDGYGG----SSASKYRSPTTTKDNSK
        G+GSGWG GSG G   G G+GFGSGYGNSG  G GG    SS S+YRS T ++D SK
Subjt:  GTGSGWGSGSGYGSGGGAGFGFGSGYGNSGVDGYGG----SSASKYRSPTTTKDNSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G61660.1 glycine-rich protein8.2e-1864.04Show/hide
Query:  NPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNSGVDGYGG
        N  G  G+  GPNW+YNWGWGS PG GWG+G+GSGRSPTG+G+G GYG+GSG+GSG G G G G GG  G G+G+GSG G SG  G GG
Subjt:  NPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGFGSGTGSGWGSGSGYGSGG--GAGFGFGSGYGNSGVDGYGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAACCATCCACAATATTTCTCTTCTTTATTCTCTTTTTCATCACAGCTTCCTCCGCCGTAAGCGGCGGCATTAGTGGCCGGAAACTGCTCAACGTTCCAGACAT
GTCCGGGGGACCCAATGGAGGTGGAGGTGTGAACCCCACGGGGGGCTATGGCGCTGCCCATGGTCCTAATTGGGACTATAATTGGGGTTGGGGTTCGATACCGGGGGGCG
GATGGGGCTTCGGTTCGGGCTCCGGCCGCTCCCCGACCGGGTTTGGAAAAGGATACGGATATGGGTTTGGATCGGGGACCGGGTCGGGGTGGGGATCAGGATCCGGATAT
GGAAGTGGGGGTGGCGCTGGATTTGGGTTCGGAAGTGGCTACGGAAATTCCGGCGTCGACGGATACGGTGGTTCGAGTGCTAGCAAGTATCGTTCGCCAACCACTACAAA
GGACAATAGCAAGCATGGCTAA
mRNA sequenceShow/hide mRNA sequence
TTACCGTCCACCAAAATTAATCATTTAAAATCTCTCTCTCTCTCTCTCTCTTTTATTTCTATCAAAAACCCAATAAAAATATGAAAAAACCATCCACAATATTTCTCTTC
TTTATTCTCTTTTTCATCACAGCTTCCTCCGCCGTAAGCGGCGGCATTAGTGGCCGGAAACTGCTCAACGTTCCAGACATGTCCGGGGGACCCAATGGAGGTGGAGGTGT
GAACCCCACGGGGGGCTATGGCGCTGCCCATGGTCCTAATTGGGACTATAATTGGGGTTGGGGTTCGATACCGGGGGGCGGATGGGGCTTCGGTTCGGGCTCCGGCCGCT
CCCCGACCGGGTTTGGAAAAGGATACGGATATGGGTTTGGATCGGGGACCGGGTCGGGGTGGGGATCAGGATCCGGATATGGAAGTGGGGGTGGCGCTGGATTTGGGTTC
GGAAGTGGCTACGGAAATTCCGGCGTCGACGGATACGGTGGTTCGAGTGCTAGCAAGTATCGTTCGCCAACCACTACAAAGGACAATAGCAAGCATGGCTAAACAAAAAA
AAAAGTATGTGAATGAATATATATTATGTTATATACTATATAGTTAATTATATAAATATGTGAGAATGGTTAAGACGTTACCCCTAACTCCCTTTAATATCTCTATAATA
TGGTTTGTAAGCTTGCTTAAAGTTTGCCCATATGTATTATATTAGTTTTTTAATAAAACTAAACTATATTTCTCGTCTTTCATTTTTATTTTTATTTTTTTTATTCTAAG
GTATATTTGGAAGATGTATTCTGTTGTTTTAGATCGGCAAAGGAAAAAAAAAAAGATAACAATGAATCAAGTCTTAGAAACATTATTTTGAGAGTGGAGGAGAC
Protein sequenceShow/hide protein sequence
MKKPSTIFLFFILFFITASSAVSGGISGRKLLNVPDMSGGPNGGGGVNPTGGYGAAHGPNWDYNWGWGSIPGGGWGFGSGSGRSPTGFGKGYGYGFGSGTGSGWGSGSGY
GSGGGAGFGFGSGYGNSGVDGYGGSSASKYRSPTTTKDNSKHG