; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004400 (gene) of Snake gourd v1 genome

Gene IDTan0004400
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPatatin
Genome locationLG03:77281548..77282142
RNA-Seq ExpressionTan0004400
SyntenyTan0004400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594656.1 hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sororia]2.1e-5592.37Show/hide
Query:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG
        +SRSSSFSE+MGAVAPLAIGTRGT+GSLVMKEIEYFTKLELERHG S R+SGDASRRSDSKTSFWLLSL+WKWKKRRTNNGILPNICSAVELSKSNRFNG
Subjt:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG

Query:  IPGFGYRILKDDVNHFPI
        IPGFGYRILK+DV HFPI
Subjt:  IPGFGYRILKDDVNHFPI

XP_022926407.1 uncharacterized protein LOC111433571 [Cucurbita moschata]5.5e-5693.22Show/hide
Query:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG
        +SRSSSFSE+MGAVAPLAIGTRGT+GSLVMKEIEYFTKLELERHG S R+SGDASRRSDSKTSFWLLSL+WKWKKRRTNNGILPNICSAVELSKSNRFNG
Subjt:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG

Query:  IPGFGYRILKDDVNHFPI
        IPGFGYRILKDDV HFPI
Subjt:  IPGFGYRILKDDVNHFPI

XP_023003961.1 uncharacterized protein LOC111497407 [Cucurbita maxima]1.6e-5591.53Show/hide
Query:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG
        +SRSSSFSE+MGAVAPLAIGTRGT+GSLVMKEIEYFTKLELERHG S R+SGDASRRSDS+TSFWLLSL+WKWKKRRTNNGILPNICSAVELSKSNRFNG
Subjt:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG

Query:  IPGFGYRILKDDVNHFPI
        IPGFGYRILKDD+ HFPI
Subjt:  IPGFGYRILKDDVNHFPI

XP_023518155.1 uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo]2.1e-5592.37Show/hide
Query:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG
        +SRSSSF E+MGAVAPLAIGTRGT+GSLVMKEIEYFTKLELERHG S R+SGDASRRSDSKTSFWLLSL+WKWKKRRTNNGILPNICSAVELSKSNRFNG
Subjt:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG

Query:  IPGFGYRILKDDVNHFPI
        IPGFGYRILKDDV HFPI
Subjt:  IPGFGYRILKDDVNHFPI

XP_038882225.1 uncharacterized protein LOC120073447 [Benincasa hispida]3.1e-5189.83Show/hide
Query:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG
        MSRS SFSEKMG VAPLAIGTRGTVGSLVMKEIEYFTKLELERHG SH ISGDA RRSDSK SFWLLSLTWKWKKR+ NNGILPNICSAVE SKSNRFNG
Subjt:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG

Query:  IPGFGYRILKDDVNHFPI
        IPGFGYRILKDD   FPI
Subjt:  IPGFGYRILKDDVNHFPI

TrEMBL top hitse value%identityAlignment
A0A0A0KL84 Uncharacterized protein4.5e-4886.55Show/hide
Query:  MSRSSSFSEKM-GAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFN
        MSRS SFSEKM GAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHG SH ISG+A RRSDS+ SFWLLSLTWKWKKR+ NNG+LPNI SAVE SKSNRFN
Subjt:  MSRSSSFSEKM-GAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFN

Query:  GIPGFGYRILKDDVNHFPI
        GIPGFGYRILKDD   FPI
Subjt:  GIPGFGYRILKDDVNHFPI

A0A6J1CKN5 uncharacterized protein LOC1110124779.1e-4984.17Show/hide
Query:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRR--TNNGILPNICSAVELSKSNRF
        +S S SFSEKMG+VAPLAIGTRGTVGSLVMKEIEYFTKLELERHG S RI+ +ASRR DSK SFWLLS TWKWKKRR  + NGILPNICSAVELSKSNRF
Subjt:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRR--TNNGILPNICSAVELSKSNRF

Query:  NGIPGFGYRILKDDVNHFPI
        NGIPGFGYRILK+DVN+F I
Subjt:  NGIPGFGYRILKDDVNHFPI

A0A6J1EEE9 uncharacterized protein LOC1114335712.6e-5693.22Show/hide
Query:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG
        +SRSSSFSE+MGAVAPLAIGTRGT+GSLVMKEIEYFTKLELERHG S R+SGDASRRSDSKTSFWLLSL+WKWKKRRTNNGILPNICSAVELSKSNRFNG
Subjt:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG

Query:  IPGFGYRILKDDVNHFPI
        IPGFGYRILKDDV HFPI
Subjt:  IPGFGYRILKDDVNHFPI

A0A6J1IJL8 uncharacterized protein LOC1114776863.5e-4884.75Show/hide
Query:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG
        MSRS SFSEKM  +APLAIGTRGTVGSLVMKEIEYFTK E+ERHG+S RISGDASRRSD K SFWL+SLTWKWKKR+ NNGILPNICSAVELSKSNRFNG
Subjt:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG

Query:  IPGFGYRILKDDVNHFPI
        IPGF YRILK D   FPI
Subjt:  IPGFGYRILKDDVNHFPI

A0A6J1KQQ8 uncharacterized protein LOC1114974077.7e-5691.53Show/hide
Query:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG
        +SRSSSFSE+MGAVAPLAIGTRGT+GSLVMKEIEYFTKLELERHG S R+SGDASRRSDS+TSFWLLSL+WKWKKRRTNNGILPNICSAVELSKSNRFNG
Subjt:  MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNG

Query:  IPGFGYRILKDDVNHFPI
        IPGFGYRILKDD+ HFPI
Subjt:  IPGFGYRILKDDVNHFPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein1.6e-1644.95Show/hide
Query:  APLAIGTRGTVGSLVMKEIEYFTKLEL------ERHGASHRISGDASR--RSDSKTSFWLLSLTWKWKKRRTNNG---ILPNICSAVELSKSNRFNGIPG
        AP+AIGTRGT+GSLV KEI+YF            R G S        +  RS S+   W     W+ KKR+T  G     P++CSAVE+S  NR   +PG
Subjt:  APLAIGTRGTVGSLVMKEIEYFTKLEL------ERHGASHRISGDASR--RSDSKTSFWLLSLTWKWKKRRTNNG---ILPNICSAVELSKSNRFNGIPG

Query:  FGYRILKDD
        F YRILK D
Subjt:  FGYRILKDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGAAGCAGTAGCTTCTCTGAGAAAATGGGTGCTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCTCTGGTCATGAAGGAGATTGAGTACTTCAC
CAAGCTTGAGCTCGAACGCCATGGCGCCTCTCACAGGATAAGTGGAGATGCTTCCAGGAGAAGCGATTCTAAGACAAGCTTTTGGCTTTTGTCGTTGACTTGGAAGTGGA
AGAAGAGAAGAACCAACAATGGGATTTTACCTAACATTTGCTCTGCTGTTGAATTGTCGAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTACAGGATCCTCAAA
GACGATGTCAACCACTTTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
CCTAAACTCAAAGCAATCCGAAAACAAAAGTCCTCGAGAAAAGGACCCTGTGAAGGCAGTGCCACTTTCACTTCCTTTTGAGTAAAATTTATAAAGGGATGAGCAGAAGC
AGTAGCTTCTCTGAGAAAATGGGTGCTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCTCTGGTCATGAAGGAGATTGAGTACTTCACCAAGCTTGAGCT
CGAACGCCATGGCGCCTCTCACAGGATAAGTGGAGATGCTTCCAGGAGAAGCGATTCTAAGACAAGCTTTTGGCTTTTGTCGTTGACTTGGAAGTGGAAGAAGAGAAGAA
CCAACAATGGGATTTTACCTAACATTTGCTCTGCTGTTGAATTGTCGAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTACAGGATCCTCAAAGACGATGTCAAC
CACTTTCCCATTTGATTTCAGCCTTCAAATTCAAATGGGTCTTGTTTGCTTTTTGTTGAAGTGCTTTTCCTTGCTCTGTTTGTATTTCATTTTAAGGTTTGCTACGTTTT
GACTGGAAAAATGAAATAAGAGTTCGATTGCTGATTTGATTGAAA
Protein sequenceShow/hide protein sequence
MSRSSSFSEKMGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGASHRISGDASRRSDSKTSFWLLSLTWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILK
DDVNHFPI