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Tan0004401 (gene) of Snake gourd v1 genome

Gene IDTan0004401
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCopper ion binding isoform 1
Genome locationLG05:53377018..53379823
RNA-Seq ExpressionTan0004401
SyntenyTan0004401
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139491.1 uncharacterized protein At2g27730, mitochondrial [Cucumis sativus]7.3e-4284.62Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIP-----SGSGSGSTEKISTDKHRNYAVVAGTVTILG
        MAAARTA RIFSRRFSS GKILSEEE+AAEN+YIKKTEQEKLEKLARKGPKPEEK G SV DS+P     S SG+ STEKISTDK RNYAVVAGTVTILG
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIP-----SGSGSGSTEKISTDKHRNYAVVAGTVTILG

Query:  ALGWYLKSKKKPEEVQD
        ALGWYLKSKKKPEEV D
Subjt:  ALGWYLKSKKKPEEVQD

XP_008461298.1 PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis melo]2.1e-4180.8Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSG-------------STEKISTDKHRNYAVV
        MAAARTA RIFSRRFSSSGKILSEEE+AAENVYIKKTEQEKLEKLARKGPKPEEK G SV DS+PS S SG             S+EKISTDK RNYAVV
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSG-------------STEKISTDKHRNYAVV

Query:  AGTVTILGALGWYLKSKKKPEEVQD
        AGTVTILGALGWYLKSKKKPEEV D
Subjt:  AGTVTILGALGWYLKSKKKPEEVQD

XP_022142661.1 uncharacterized protein At2g27730, mitochondrial [Momordica charantia]3.0e-4387.18Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGS-----GSTEKISTDKHRNYAVVAGTVTILG
        MAAARTA RI SRRFSSSGKILSEEE+AAENVYIKKTEQEKLEKLARKGPKPEEK GGS  DSIPSGS S      S EKISTDKHRNYAVVAGTVTILG
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGS-----GSTEKISTDKHRNYAVVAGTVTILG

Query:  ALGWYLKSKKKPEEVQD
        A+GWYLKSKKKPEEVQD
Subjt:  ALGWYLKSKKKPEEVQD

XP_038893784.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]1.4e-4591.3Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGS---GSTEKISTDKHRNYAVVAGTVTILGAL
        MAAARTA RIFSRRFSSSGKILSEEE+AAENVYIKKTEQEKLEKLARKGPKPEEK+GGSVTDSIPSGS S    STEKIS+DKHRNYAVVAGTVTILGAL
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGS---GSTEKISTDKHRNYAVVAGTVTILGAL

Query:  GWYLKSKKKPEEVQD
        GWYLKSKKKPEEV+D
Subjt:  GWYLKSKKKPEEVQD

XP_038895664.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]7.3e-4286.21Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGS----GSTEKISTDKHRNYAVVAGTVTILGA
        MAAARTA RIFSRRFSSSGKILSEEE+AAENVYIKK EQEKLEKLARKGPKPEEK  GSV  S+PSGS S     STEKIS+DKHRNYAVVAGTVTILGA
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGS----GSTEKISTDKHRNYAVVAGTVTILGA

Query:  LGWYLKSKKKPEEVQD
        LGWYLKSKKKPEEV D
Subjt:  LGWYLKSKKKPEEVQD

TrEMBL top hitse value%identityAlignment
A0A0A0LT33 Uncharacterized protein3.5e-4284.62Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIP-----SGSGSGSTEKISTDKHRNYAVVAGTVTILG
        MAAARTA RIFSRRFSS GKILSEEE+AAEN+YIKKTEQEKLEKLARKGPKPEEK G SV DS+P     S SG+ STEKISTDK RNYAVVAGTVTILG
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIP-----SGSGSGSTEKISTDKHRNYAVVAGTVTILG

Query:  ALGWYLKSKKKPEEVQD
        ALGWYLKSKKKPEEV D
Subjt:  ALGWYLKSKKKPEEVQD

A0A1S3CEE3 uncharacterized protein At2g27730, mitochondrial1.0e-4180.8Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSG-------------STEKISTDKHRNYAVV
        MAAARTA RIFSRRFSSSGKILSEEE+AAENVYIKKTEQEKLEKLARKGPKPEEK G SV DS+PS S SG             S+EKISTDK RNYAVV
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSG-------------STEKISTDKHRNYAVV

Query:  AGTVTILGALGWYLKSKKKPEEVQD
        AGTVTILGALGWYLKSKKKPEEV D
Subjt:  AGTVTILGALGWYLKSKKKPEEVQD

A0A5A7T219 Uncharacterized protein1.0e-4180.8Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSG-------------STEKISTDKHRNYAVV
        MAAARTA RIFSRRFSSSGKILSEEE+AAENVYIKKTEQEKLEKLARKGPKPEEK G SV DS+PS S SG             S+EKISTDK RNYAVV
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSG-------------STEKISTDKHRNYAVV

Query:  AGTVTILGALGWYLKSKKKPEEVQD
        AGTVTILGALGWYLKSKKKPEEV D
Subjt:  AGTVTILGALGWYLKSKKKPEEVQD

A0A6J1CMV3 uncharacterized protein At2g27730, mitochondrial1.4e-4387.18Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGS-----GSTEKISTDKHRNYAVVAGTVTILG
        MAAARTA RI SRRFSSSGKILSEEE+AAENVYIKKTEQEKLEKLARKGPKPEEK GGS  DSIPSGS S      S EKISTDKHRNYAVVAGTVTILG
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGS-----GSTEKISTDKHRNYAVVAGTVTILG

Query:  ALGWYLKSKKKPEEVQD
        A+GWYLKSKKKPEEVQD
Subjt:  ALGWYLKSKKKPEEVQD

A0A6J1G0C8 uncharacterized protein At2g27730, mitochondrial8.7e-4185.34Show/hide
Query:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSG---SGSG-STEKISTDKHRNYAVVAGTVTILGA
        MAAARTA RIFSRRFS SGKILSEEE+AAEN+YIKKTEQEKLEKLARKGPKPEEK   SV +SIPSG   SGSG STEKIS+DK+RNYAVVAGTVTI GA
Subjt:  MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSG---SGSG-STEKISTDKHRNYAVVAGTVTILGA

Query:  LGWYLKSKKKPEEVQD
        LGWYLKSKKKPEEV D
Subjt:  LGWYLKSKKKPEEVQD

SwissProt top hitse value%identityAlignment
Q9ZUX4 Uncharacterized protein At2g27730, mitochondrial1.6e-2360.36Show/hide
Query:  AARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSGSTE---KISTDKHRNYAVVAGTVTILGALGW
        A R A RI SRRF SSGK+LSEEERAAENV+IKK EQEKL+KLAR+GP  E+ +G +    +   + S S E   K+S DK+RNYAVVAG V I+G++GW
Subjt:  AARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSGSTE---KISTDKHRNYAVVAGTVTILGALGW

Query:  YLKS--KKKPE
        YLK+  KK+PE
Subjt:  YLKS--KKKPE

Arabidopsis top hitse value%identityAlignment
AT2G27730.1 copper ion binding1.1e-2460.36Show/hide
Query:  AARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSGSTE---KISTDKHRNYAVVAGTVTILGALGW
        A R A RI SRRF SSGK+LSEEERAAENV+IKK EQEKL+KLAR+GP  E+ +G +    +   + S S E   K+S DK+RNYAVVAG V I+G++GW
Subjt:  AARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSGSTE---KISTDKHRNYAVVAGTVTILGALGW

Query:  YLKS--KKKPE
        YLK+  KK+PE
Subjt:  YLKS--KKKPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGCGAGAACGGCCACAAGAATTTTTTCTCGAAGGTTCTCGAGCAGCGGGAAGATTCTCAGCGAAGAAGAAAGAGCTGCTGAGAATGTCTATATCAAGAAAAC
TGAACAAGAGAAACTGGAGAAGCTTGCCCGCAAGGGACCTAAACCAGAAGAAAAGTCGGGGGGATCGGTAACCGATTCCATTCCAAGTGGGTCGGGCTCAGGATCAACGG
AGAAAATATCGACTGACAAACACCGCAATTATGCTGTTGTAGCCGGAACTGTGACTATTCTTGGTGCTCTTGGCTGGTATCTGAAATCTAAAAAGAAGCCAGAAGAAGTC
CAGGACTGA
mRNA sequenceShow/hide mRNA sequence
CGAGTACCGATTCATTTCTTTAGATCAAACGGCTTCGAGTGGGTTGATCTCCACACATTTCGCCTTCGGAAATTTTACATCTACAAAGCCCTATTCGACTTCCTCCACAG
CAACTCCCACCCTTTTCTTCTCTCTCCTCCTCCTCCTTCTTTCGGCGATCAATCGAAATGGCAGCAGCGAGAACGGCCACAAGAATTTTTTCTCGAAGGTTCTCGAGCAG
CGGGAAGATTCTCAGCGAAGAAGAAAGAGCTGCTGAGAATGTCTATATCAAGAAAACTGAACAAGAGAAACTGGAGAAGCTTGCCCGCAAGGGACCTAAACCAGAAGAAA
AGTCGGGGGGATCGGTAACCGATTCCATTCCAAGTGGGTCGGGCTCAGGATCAACGGAGAAAATATCGACTGACAAACACCGCAATTATGCTGTTGTAGCCGGAACTGTG
ACTATTCTTGGTGCTCTTGGCTGGTATCTGAAATCTAAAAAGAAGCCAGAAGAAGTCCAGGACTGAGATAGCAAACAGAATGTTATTCTTGGTTAATGAATACCTTTTGT
TCAGATTTACGTTTCTGTGGAAAATGGTTTTCTTTTCGGCCTTGTTTCCTTTTCTGGAAAATTAACAGTGAGAGACAAGCATGGGAGAATGCATTGTGACAAAGACATTG
TCTTATTGGGTTTCGTTTTCACACTCTCTCCAACAATATCGAGTAAATAAATCCTTCATTTTGATC
Protein sequenceShow/hide protein sequence
MAAARTATRIFSRRFSSSGKILSEEERAAENVYIKKTEQEKLEKLARKGPKPEEKSGGSVTDSIPSGSGSGSTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKPEEV
QD