; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004412 (gene) of Snake gourd v1 genome

Gene IDTan0004412
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptiont-SNARE coiled-coil homology domain-containing protein
Genome locationLG07:2413634..2415525
RNA-Seq ExpressionTan0004412
SyntenyTan0004412
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0048278 - vesicle docking (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ11422.1 syntaxin of plants 71 [Actinidia rufa]3.4e-1984.38Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +E+D+QVPLMDEINTKVDK  SDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

KAA0044019.1 syntaxin-71 [Cucumis melo var. makuwa]2.0e-1985.94Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

XP_004144411.1 syntaxin-71 [Cucumis sativus]2.0e-1985.94Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

XP_008442667.1 PREDICTED: syntaxin-71 [Cucumis melo]2.0e-1985.94Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

XP_038904060.1 syntaxin-71 [Benincasa hispida]2.0e-1985.94Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

TrEMBL top hitse value%identityAlignment
A0A0A0LE82 t-SNARE coiled-coil homology domain-containing protein9.6e-2085.94Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

A0A1S3B689 syntaxin-719.6e-2085.94Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

A0A3Q0ELE2 syntaxin-71 isoform X12.1e-1977.61Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTSK
        M +E+D+QVPLMDEI+TKVDK +SDLKNTN RLKDTVNQLRS+RNFCIDI+LL IILGIA YLY  +
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTSK

A0A5A7TS26 Syntaxin-719.6e-2085.94Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

A0A7J0GKX9 Syntaxin of plants 711.6e-1984.38Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +E+D+QVPLMDEINTKVDK  SDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

SwissProt top hitse value%identityAlignment
Q94KK5 Syntaxin-732.3e-1868.18Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS
        + +E+D+Q PLMDEI+TK+DK A+DLK+TN RLKDTV +LRS+RNFCIDIILL I+LGIA ++Y S
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS

Q94KK6 Syntaxin-721.6e-1665.15Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS
        M +E+DKQVPLM+E+ TKVD   SDLKNTN RLK  + Q+RS+RNFCIDIILL +ILGI  Y+Y +
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS

Q9SF29 Syntaxin-714.9e-2178.12Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +E+D+QVPLMDEI+TKVD+  SDLKNTN RLKDTVNQLRS+RNFCIDI+LL I+LGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

Arabidopsis top hitse value%identityAlignment
AT3G09740.1 syntaxin of plants 713.5e-2278.12Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY
        M +E+D+QVPLMDEI+TKVD+  SDLKNTN RLKDTVNQLRS+RNFCIDI+LL I+LGIA YLY
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLY

AT3G45280.1 syntaxin of plants 721.2e-1765.15Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS
        M +E+DKQVPLM+E+ TKVD   SDLKNTN RLK  + Q+RS+RNFCIDIILL +ILGI  Y+Y +
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS

AT3G61450.1 syntaxin of plants 731.6e-1968.18Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS
        + +E+D+Q PLMDEI+TK+DK A+DLK+TN RLKDTV +LRS+RNFCIDIILL I+LGIA ++Y S
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS

AT3G61450.2 syntaxin of plants 731.6e-1968.18Show/hide
Query:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS
        + +E+D+Q PLMDEI+TK+DK A+DLK+TN RLKDTV +LRS+RNFCIDIILL I+LGIA ++Y S
Subjt:  MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGGAAATAGACAAGCAAGTTCCTTTGATGGACGAGATCAACACTAAGGTGGACAAGGTTGCATCTGACCTTAAGAACACCAACGCCAGATTAAAGGACACAGT
TAACCAGCTAAGGTCCAACAGAAATTTCTGTATTGATATCATTTTGTTGCGTATAATCTTGGGTATTGCTCCCTATCTATATACAAGTAAAGTATTAATGAAACTTTTGA
AAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGGAAATAGACAAGCAAGTTCCTTTGATGGACGAGATCAACACTAAGGTGGACAAGGTTGCATCTGACCTTAAGAACACCAACGCCAGATTAAAGGACACAGT
TAACCAGCTAAGGTCCAACAGAAATTTCTGTATTGATATCATTTTGTTGCGTATAATCTTGGGTATTGCTCCCTATCTATATACAAGTAAAGTATTAATGAAACTTTTGA
AAGTTTAG
Protein sequenceShow/hide protein sequence
MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTSKVLMKLLKV