; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004451 (gene) of Snake gourd v1 genome

Gene IDTan0004451
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG04:36612767..36613288
RNA-Seq ExpressionTan0004451
SyntenyTan0004451
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5547197.1 hypothetical protein RHGRI_013014 [Rhododendron griersonianum]1.5e-1435.54Show/hide
Query:  SGLRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGH
        S L F+   FW +IH   + ++  +    + K +G V  V+  GE   L  FLR+R+ ++IT PL K   L+ A  ++IW   +YE+LSD+C+ CGI+GH
Subjt:  SGLRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGH

Query:  SIKESRVHSMRLVKSNSWSME
        S+ + +  S  + K   WS +
Subjt:  SIKESRVHSMRLVKSNSWSME

XP_006484927.1 uncharacterized protein LOC102626623 [Citrus sinensis]9.0e-1542Show/hide
Query:  FTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSIKE
        FTH SFW +IH   +  M     + LG+++G VEEV+ + E + +GPF R+R+ ++IT PL + L LK    ++I   I+Y++L D+CF CG+IGH  +E
Subjt:  FTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSIKE

XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]3.6e-1646Show/hide
Query:  FTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSIKE
        FTH +FW +I +  +  M  E+ + LG  +G VEE++ +   + LG F RIRVL+NIT+PL K L LK     +I  P+ YE+L D+C+ CGIIGH  KE
Subjt:  FTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSIKE

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]6.8e-2344.35Show/hide
Query:  LRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSI
        + F   +FW +IH+     ++ EMA +LG ++G VEE++ +G D W GPF+R+RV ++++ PL + +KLK +  K+IWCP+RYEKL D+C+ CG IGHS 
Subjt:  LRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSI

Query:  KESRVHSMRLVKSNS
        +E    S ++V +NS
Subjt:  KESRVHSMRLVKSNS

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.1e-2050Show/hide
Query:  SFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSIKE
        +FW +IH      MT +MAK LG  +G VEEVD      W+ PFL +RV +N+  PL + LK+KT+  K+IWCP+RYE+L D+C+ CG +GHSI+E
Subjt:  SFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSIKE

TrEMBL top hitse value%identityAlignment
A0A2N9E949 CCHC-type domain-containing protein1.6e-1734.19Show/hide
Query:  MKTLKEEDKISGLRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSD
        +K    + K+ G++ T  SFW +IH+     M  E A  +G  +G++EE+D   +    G F+R++V +++++PL++  ++K    + IW  ++YEKL  
Subjt:  MKTLKEEDKISGLRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSD

Query:  YCFNCGIIGHSIKESRV
        +C+NCGI+GHS +E R+
Subjt:  YCFNCGIIGHSIKESRV

A0A2N9G3M9 CCHC-type domain-containing protein3.3e-1535.24Show/hide
Query:  LRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSI
        ++ T  SFW +IH+     M  E A  +G  +G++EE+D   +    G F+R++V +++++PL++  ++K    + IW  ++YEKL  +C+NCGI+GHS 
Subjt:  LRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSI

Query:  KESRV
        +E R+
Subjt:  KESRV

A0A6A4LZN0 CCHC-type domain-containing protein (Fragment)7.4e-1535.54Show/hide
Query:  SGLRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGH
        S L F+   FW +IH   + ++  +    + K +G V  V+  GE   L  FLR+R+ ++IT PL K   L+ A  ++IW   +YE+LSD+C+ CGI+GH
Subjt:  SGLRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGH

Query:  SIKESRVHSMRLVKSNSWSME
        S+ + +  S  + K   WS +
Subjt:  SIKESRVHSMRLVKSNSWSME

A0A6J1D765 uncharacterized protein LOC1110179023.3e-2344.35Show/hide
Query:  LRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSI
        + F   +FW +IH+     ++ EMA +LG ++G VEE++ +G D W GPF+R+RV ++++ PL + +KLK +  K+IWCP+RYEKL D+C+ CG IGHS 
Subjt:  LRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSI

Query:  KESRVHSMRLVKSNS
        +E    S ++V +NS
Subjt:  KESRVHSMRLVKSNS

A0A6J1DVS4 uncharacterized protein LOC1110235555.3e-2150Show/hide
Query:  SFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSIKE
        +FW +IH      MT +MAK LG  +G VEEVD      W+ PFL +RV +N+  PL + LK+KT+  K+IWCP+RYE+L D+C+ CG +GHSI+E
Subjt:  SFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSIKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G36228.1 nucleic acid binding;zinc ion binding4.0e-0525Show/hide
Query:  WFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSI
        W  I    + Y++    +++   +G V  +D+N E      F+R++V ++ T PL    +++ A  +       YEKL   C NC  + H +
Subjt:  WFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGHSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACCCTAAAAGAAGAGGACAAGATTTCTGGTCTTAGGTTTACACATCAGTCATTTTGGTTTGAAATTCATGATACCCAAATGAATTACATGACTGTAGAGATGGC
TAAATTATTGGGAAAAGAAGTTGGATTGGTAGAGGAAGTCGATTGGAATGGGGAAGATAAGTGGTTAGGACCCTTTTTACGTATTCGAGTACTGTTAAACATTACGATCC
CGTTGATGAAAGAGTTGAAGCTAAAAACTGCATATGTTAAGGAGATTTGGTGTCCTATTAGATATGAAAAGTTATCGGATTATTGTTTCAATTGTGGAATCATTGGTCAC
TCAATCAAGGAATCCCGAGTTCATTCGATGAGGTTAGTGAAGTCAAACAGTTGGAGTATGGAGATAGGATTAGAGTTATGGTTATCAAGAAAAACCTTAATGAGAATGAT
GATGATTACTTATCTAGAGTGGGTGGTCAAGGAAGAAGCAATAAAGAAAGAGGAGGATTTAGGGGAAGGGGTGGTATACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAACCCTAAAAGAAGAGGACAAGATTTCTGGTCTTAGGTTTACACATCAGTCATTTTGGTTTGAAATTCATGATACCCAAATGAATTACATGACTGTAGAGATGGC
TAAATTATTGGGAAAAGAAGTTGGATTGGTAGAGGAAGTCGATTGGAATGGGGAAGATAAGTGGTTAGGACCCTTTTTACGTATTCGAGTACTGTTAAACATTACGATCC
CGTTGATGAAAGAGTTGAAGCTAAAAACTGCATATGTTAAGGAGATTTGGTGTCCTATTAGATATGAAAAGTTATCGGATTATTGTTTCAATTGTGGAATCATTGGTCAC
TCAATCAAGGAATCCCGAGTTCATTCGATGAGGTTAGTGAAGTCAAACAGTTGGAGTATGGAGATAGGATTAGAGTTATGGTTATCAAGAAAAACCTTAATGAGAATGAT
GATGATTACTTATCTAGAGTGGGTGGTCAAGGAAGAAGCAATAAAGAAAGAGGAGGATTTAGGGGAAGGGGTGGTATACTAG
Protein sequenceShow/hide protein sequence
MKTLKEEDKISGLRFTHQSFWFEIHDTQMNYMTVEMAKLLGKEVGLVEEVDWNGEDKWLGPFLRIRVLLNITIPLMKELKLKTAYVKEIWCPIRYEKLSDYCFNCGIIGH
SIKESRVHSMRLVKSNSWSMEIGLELWLSRKTLMRMMMITYLEWVVKEEAIKKEEDLGEGVVY