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Tan0004462 (gene) of Snake gourd v1 genome

Gene IDTan0004462
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS-protein homolog
Genome locationLG07:72621266..72621451
RNA-Seq ExpressionTan0004462
SyntenyTan0004462
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650840.1 hypothetical protein Csa_017632 [Cucumis sativus]2.7e-2275.41Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        M NDHNHV+LEVFWPEA +  +L YRCRDNVC+WSARNDGIYI+NVPENKFE   KWLP +
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
TQD95937.1 hypothetical protein C1H46_018424 [Malus baccata]7.3e-1251.67Show/hide
Query:  RNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        R DH H A +V+W E+  N WLRYRC    CFW A++DG YI  +PE + E + KW PGW
Subjt:  RNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
TQD95938.1 hypothetical protein C1H46_018425 [Malus baccata]5.6e-1250.82Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        M NDH + + +VFWPE+  + WLRYRC    CFW A++DGIY+  + E++ EF +KW PGW
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
XP_009372346.1 PREDICTED: uncharacterized protein LOC103961515 [Pyrus x bretschneideri]1.0e-1354.1Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        M NDH H + +VFWPE+  + WLRYRC    CFW A+ DGIY+  +PE++ EF +KW PGW
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
XP_028959329.1 S-protein homolog 1-like [Malus domestica]5.6e-1250.82Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        M NDH + + +VFWPE+  + WLRYRC    CFW A++DGIY+  + E++ EF +KW PGW
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
TrEMBL top hitse value%identityAlignment
A0A0A0L8P9 Uncharacterized protein3.4e-2378.33Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPG
        M NDHNHV+LEVFWPEA +  +L YRCRDNVC+WSARNDGIYI+NVPENKFE   KWLPG
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPG
A0A498JWH5 S-protein homolog4.6e-1251.67Show/hide
Query:  RNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        R DH H A +V+W E+  N WLRYRC    CFW A++DG YI  +PE + E + KW PGW
Subjt:  RNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
A0A540MB18 S-protein homolog3.5e-1251.67Show/hide
Query:  RNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        R DH H A +V+W E+  N WLRYRC    CFW A++DG YI  +PE + E + KW PGW
Subjt:  RNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
A0A540MB75 S-protein homolog2.7e-1250.82Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        M NDH + + +VFWPE+  + WLRYRC    CFW A++DGIY+  + E++ EF +KW PGW
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
A0A5N5INF0 S-protein homolog4.6e-1251.67Show/hide
Query:  RNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        R DH H A +V+W E+  N WLRYRC    CFW A++DG YI  +PE + E + KW PGW
Subjt:  RNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 18.1e-0632.79Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        M  D+ H+ + VFW + +    L +RC    C W+A+ DG+Y++N    +     KW  GW
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
Q2HQ46 S-protein homolog 743.6e-0634.43Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        M  D  H+ ++VFW + +    L +RC    C W+A+NDG+Y++N    +     KW  GW
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 15.8e-0732.79Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        M  D+ H+ + VFW + +    L +RC    C W+A+ DG+Y++N    +     KW  GW
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
AT4G29035.1 Plant self-incompatibility protein S1 family2.6e-0734.43Show/hide
Query:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW
        M  D  H+ ++VFW + +    L +RC    C W+A+NDG+Y++N    +     KW  GW
Subjt:  MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAACGACCACAATCATGTCGCTTTAGAAGTGTTTTGGCCCGAAGCATTGGCTAACCAATGGCTTCGCTATAGATGTCGTGATAATGTTTGCTTTTGGTCGGCAAG
AAACGATGGAATCTATATTTTTAATGTTCCTGAAAATAAGTTTGAGTTTGTTGTTAAGTGGTTGCCTGGTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCAACGACCACAATCATGTCGCTTTAGAAGTGTTTTGGCCCGAAGCATTGGCTAACCAATGGCTTCGCTATAGATGTCGTGATAATGTTTGCTTTTGGTCGGCAAG
AAACGATGGAATCTATATTTTTAATGTTCCTGAAAATAAGTTTGAGTTTGTTGTTAAGTGGTTGCCTGGTTGGTAG
Protein sequenceShow/hide protein sequence
MRNDHNHVALEVFWPEALANQWLRYRCRDNVCFWSARNDGIYIFNVPENKFEFVVKWLPGW