; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004481 (gene) of Snake gourd v1 genome

Gene IDTan0004481
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMADS-box transcription factor
Genome locationLG04:77172841..77173029
RNA-Seq ExpressionTan0004481
SyntenyTan0004481
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605325.1 Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. sororia]6.7e-1367.24Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDKFNF
        MGRGKL++KLISN KSR +TF KRKNSL++K+YELSTLCDVR CV+++GP+  D+  F
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDKFNF

XP_022947673.1 floral homeotic protein FBP1-like [Cucurbita moschata]1.1e-1269.09Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDK
        MGRGKL++KLISN KSR +TF KRKNSL++K+YELSTLCDVR CV+++GP+  D+
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDK

XP_023007212.1 MADS-box transcription factor PHERES 2-like [Cucurbita maxima]5.1e-1370.91Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDK
        MGRGKL++KLISN KSR +TF KRKNSL++K+YELSTLCDVR CV+++GPS  D+
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDK

XP_038887053.1 agamous-like MADS-box protein AGL82, partial [Benincasa hispida]3.9e-1378.85Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSS
        MGRGKL+L LI NRKSR+STFKKRKNSL+KK+YELSTLCDV+ CVL++GP+S
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSS

XP_038887059.1 agamous-like MADS-box protein AGL82, partial [Benincasa hispida]3.9e-1378.85Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSS
        MGRGKL+L LI NRKSR+STFKKRKNSL+KK+YELSTLCDV+ CVL++GP+S
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSS

TrEMBL top hitse value%identityAlignment
A0A6J1F4C8 agamous-like MADS-box protein AGL141.0e-1180Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP
        M RGKL+  LI NRKSR STFK+RKNSL+KK+YELSTLCDVR CVLINGP
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP

A0A6J1G795 floral homeotic protein FBP1-like5.5e-1369.09Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDK
        MGRGKL++KLISN KSR +TF KRKNSL++K+YELSTLCDVR CV+++GP+  D+
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDK

A0A6J1ICD8 agamous-like MADS-box protein AGL1034.7e-1265.52Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDKFNF
        MGRGKL+++LI N KSR +TF KRK SLL+K+YELSTLCDVR+CVL++GP+ +D+  F
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDKFNF

A0A6J1J5U6 agamous-like MADS-box protein AGL141.0e-1180Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP
        M RGKL+  LI NRKSR STFK+RKNSL+KK+YELSTLCDVR CVLINGP
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP

A0A6J1KY19 MADS-box transcription factor PHERES 2-like2.5e-1370.91Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDK
        MGRGKL++KLISN KSR +TF KRKNSL++K+YELSTLCDVR CV+++GPS  D+
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDK

SwissProt top hitse value%identityAlignment
A2XDY1 MADS-box transcription factor 13.3e-0759.57Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI
        MGRGK+ LK I N+ SR  TF KR+N LLKK+YELS LCD  + ++I
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI

A2Y9P0 MADS-box transcription factor 52.6e-0759.57Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI
        MGRGK+ LK I N+ SR  TF KR+N LLKK+YELS LCD  + ++I
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI

P29383 Agamous-like MADS-box protein AGL33.3e-0759.57Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI
        MGRGK+ LK I N+ +R  TF KR+N LLKK+YELS LCD  + +LI
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI

Q0DEB8 MADS-box transcription factor 52.6e-0759.57Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI
        MGRGK+ LK I N+ SR  TF KR+N LLKK+YELS LCD  + ++I
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI

Q10PZ9 MADS-box transcription factor 13.3e-0759.57Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI
        MGRGK+ LK I N+ SR  TF KR+N LLKK+YELS LCD  + ++I
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI

Arabidopsis top hitse value%identityAlignment
AT1G77950.1 AGAMOUS-like 676.9e-0854.9Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPS
        MGR KL LK I    +R  TF KRK  L+KK+YELSTLCD+ + +L+  PS
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPS

AT2G03710.1 K-box region and MADS-box transcription factor family protein2.4e-0859.57Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI
        MGRGK+ LK I N+ +R  TF KR+N LLKK+YELS LCD  + +LI
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI

AT2G03710.2 K-box region and MADS-box transcription factor family protein2.4e-0859.57Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI
        MGRGK+ LK I N+ +R  TF KR+N LLKK+YELS LCD  + +LI
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI

AT2G03710.3 K-box region and MADS-box transcription factor family protein2.4e-0859.57Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI
        MGRGK+ LK I N+ +R  TF KR+N LLKK+YELS LCD  + +LI
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLI

AT5G26580.1 AGAMOUS-like-345.3e-0856Show/hide
Query:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP
        MG  K+ L LI+N  SR ++F KRKN ++KK YELSTLC V+ C LI  P
Subjt:  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAGGAAAGCTGAATCTGAAACTTATTTCAAATCGGAAATCACGAATGTCGACGTTCAAGAAGAGGAAAAATAGCTTGCTGAAGAAATCTTATGAGCTGTCGAC
GCTTTGCGACGTTCGAATGTGCGTTCTGATCAATGGCCCTTCTTCTGATGACAAGTTTAATTTTGTTTGTGGTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAGGAAAGCTGAATCTGAAACTTATTTCAAATCGGAAATCACGAATGTCGACGTTCAAGAAGAGGAAAAATAGCTTGCTGAAGAAATCTTATGAGCTGTCGAC
GCTTTGCGACGTTCGAATGTGCGTTCTGATCAATGGCCCTTCTTCTGATGACAAGTTTAATTTTGTTTGTGGTGCATAA
Protein sequenceShow/hide protein sequence
MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDKFNFVCGA