; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004502 (gene) of Snake gourd v1 genome

Gene IDTan0004502
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG09:71467726..71469222
RNA-Seq ExpressionTan0004502
SyntenyTan0004502
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138171.1 chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus]1.7e-13996.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSG+L R LSVKPV+ASS SSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN+ GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTI+QTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo]2.6e-14096.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSG+LHR LSVKPV+ASS SSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN+ GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTI+QTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

XP_022134700.1 chlorophyll a-b binding protein P4, chloroplastic [Momordica charantia]1.7e-13995.63Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS +LHRELSVKPVAA S SS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN+VGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTI+QTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

XP_023516219.1 chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]6.5e-13995.24Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSG+LHR LSVKPVAASS SSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN+VGYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTI+QTF GN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

XP_038880569.1 chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]2.4e-14196.83Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSG+LHRELSVKPV+ASS SSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN+ GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTI+QTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

TrEMBL top hitse value%identityAlignment
A0A0A0LSB4 Chlorophyll a-b binding protein, chloroplastic8.2e-14096.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSG+L R LSVKPV+ASS SSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN+ GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTI+QTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

A0A1S3BV45 Chlorophyll a-b binding protein, chloroplastic1.3e-14096.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSG+LHR LSVKPV+ASS SSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN+ GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTI+QTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

A0A5A7UWR2 Chlorophyll a-b binding protein, chloroplastic1.3e-14096.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSG+LHR LSVKPV+ASS SSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPN+ GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTI+QTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

A0A6J1BZ19 Chlorophyll a-b binding protein, chloroplastic8.2e-14095.63Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS +LHRELSVKPVAA S SS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN+VGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTI+QTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

A0A6J1JG60 Chlorophyll a-b binding protein, chloroplastic7.0e-13994.84Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSG+LHR LSVKPVAASS SSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+W+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN+VGYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTI+QTF GN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic1.6e-6349.79Show/hide
Query:  AARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT
        A ++ FL G   R+ + ++     + + S+   +  +  W PG   P +L+GSLPGD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  T
Subjt:  AARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----APTLEAKEKEIANGRL
        KIG++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL +     A   E + KEI NGRL
Subjt:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----APTLEAKEKEIANGRL

Query:  AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF
        AMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF

P27521 Chlorophyll a-b binding protein 4, chloroplastic3.8e-12684.8Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASS-FSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG
        MATVTT ASA++FRPC ++ RFL+GSSGRL+R+LS   + +S+  SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASS-FSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SDPWHNTI+QTF
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)3.2e-8869.16Show/hide
Query:  RLHRELSVKPVAASSFSSFKVEA---KKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ
        R    +   P A+ S  S + +     KG WLPGL SPAYL+GSL GDNGFDPL LAEDPE+LRW+VQA++VNGRWAMLGVAGML+PEV TK G++NAP+
Subjt:  RLHRELSVKPVAASSFSSFKVEA---KKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ

Query:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNV
        W    GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP++ GYPG +FNPLNFAP LE KEKE+ANGRLAMLAFLGF+VQHNV
Subjt:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNV

Query:  TGKGPFDNLLQHISDPWHNTIIQTFGG
         GKGPF+NL QH++DPWHNTIIQT  G
Subjt:  TGKGPFDNLLQHISDPWHNTIIQTFGG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic2.2e-12986.51Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAA+F PC  +SRFL GSSG+L+R ++ +PV  S  +SFKVEAKKGEWLPGL SP YL GSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFT IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNLLQHISDPWHNTI+QT GGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic2.4e-6450Show/hide
Query:  TQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAA--SSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM
        + A AA+  P      FL G   RL ++L+V  V+   +S  +   +  +  W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAA--SSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----APT

Query:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF
         E + KEI NGRLAMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 61.5e-5643.24Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSS--GRLHRELSVKPVAASSFSSF--KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAEL
        + +  T +++ V  P   R    S SS  GRL RE  V   A    SS    +   +  W PG   P +L+GSLPGD GFDPLGL  DP+ L+W+ QAEL
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSS--GRLHRELSVKPVAASSFSSF--KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAEL

Query:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF--
        ++ RWAML V G+++PE   ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +     P  DVGYPGG++       
Subjt:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF--

Query:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF
             P +  + KEI NGRLAMLAFLGF  Q   T + P +NL+ H++DP H  +   F
Subjt:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF

AT1G45474.1 photosystem I light harvesting complex gene 57.8e-5847.72Show/hide
Query:  SSGRLHRELSVKPVAASSFSSFK---------VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT
        + G LH       V     SS K         V  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++  
Subjt:  SSGRLHRELSVKPVAASSFSSFK---------VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFAPTLEA----KEKEIAN
          GI N P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL  A  ++     K KEI N
Subjt:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFAPTLEA----KEKEIAN

Query:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQT
        GRLAM+A LGF VQ +VT  GP DNL++H+S+PWH TIIQT
Subjt:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQT

AT1G45474.2 photosystem I light harvesting complex gene 57.8e-5847.72Show/hide
Query:  SSGRLHRELSVKPVAASSFSSFK---------VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT
        + G LH       V     SS K         V  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++  
Subjt:  SSGRLHRELSVKPVAASSFSSFK---------VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFAPTLEA----KEKEIAN
          GI N P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL  A  ++     K KEI N
Subjt:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPLNFAPTLEA----KEKEIAN

Query:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQT
        GRLAM+A LGF VQ +VT  GP DNL++H+S+PWH TIIQT
Subjt:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQT

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A42.7e-12784.8Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASS-FSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG
        MATVTT ASA++FRPC ++ RFL+GSSGRL+R+LS   + +S+  SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASS-FSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SDPWHNTI+QTF
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF

AT3G61470.1 photosystem I light harvesting complex gene 21.7e-6550Show/hide
Query:  TQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAA--SSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM
        + A AA+  P      FL G   RL ++L+V  V+   +S  +   +  +  W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAA--SSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----APT

Query:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF
         E + KEI NGRLAMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGTCACCACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCGAGGTTCCTTTCTGGGTCATCCGGTAGACTCCACCGTGAGCTGTCGGTTAA
ACCGGTGGCTGCTTCGTCGTTTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAATGGTTGCCTGGTCTGCCATCTCCGGCATACTTAAATGGAAGTCTTCCGGGCGATA
ACGGATTTGACCCATTGGGTCTAGCGGAAGACCCAGAGAACTTGAGGTGGTATGTGCAAGCAGAGCTCGTAAACGGGCGGTGGGCGATGTTGGGTGTCGCCGGAATGCTG
CTGCCGGAGGTGTTCACCAAGATCGGAATCATCAACGCCCCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCCTCATCTTCAACCCTGTTCGTGATCGAGTTCAT
CCTCTTCCATTACGTGGAAATCCGAAGATGGCAGGACATTAAAAACCCAGGCAGCGTCAACCAAGACCCCATTTTCAAACAATACAGTTTGCCCCCAAATGACGTCGGTT
ACCCTGGTGGCATTTTCAACCCCCTCAATTTCGCTCCTACTCTTGAAGCCAAAGAGAAGGAAATCGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATTGTG
CAACACAATGTGACTGGGAAGGGGCCGTTTGACAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTATCCAAACGTTCGGTGGCAACTAA
mRNA sequenceShow/hide mRNA sequence
CTGAAGCGAAGTTACAAAGCCCTGCAAATTACTCCCCCATTTCTTTACTCCTGAATATCCATTTTCTTCCTCAACCGCCAAAAGAAGATCCTTCAGGAGAAATGGCCACC
GTCACCACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCGAGGTTCCTTTCTGGGTCATCCGGTAGACTCCACCGTGAGCTGTCGGTTAAACCGGTGGC
TGCTTCGTCGTTTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAATGGTTGCCTGGTCTGCCATCTCCGGCATACTTAAATGGAAGTCTTCCGGGCGATAACGGATTTG
ACCCATTGGGTCTAGCGGAAGACCCAGAGAACTTGAGGTGGTATGTGCAAGCAGAGCTCGTAAACGGGCGGTGGGCGATGTTGGGTGTCGCCGGAATGCTGCTGCCGGAG
GTGTTCACCAAGATCGGAATCATCAACGCCCCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCCTCATCTTCAACCCTGTTCGTGATCGAGTTCATCCTCTTCCA
TTACGTGGAAATCCGAAGATGGCAGGACATTAAAAACCCAGGCAGCGTCAACCAAGACCCCATTTTCAAACAATACAGTTTGCCCCCAAATGACGTCGGTTACCCTGGTG
GCATTTTCAACCCCCTCAATTTCGCTCCTACTCTTGAAGCCAAAGAGAAGGAAATCGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATTGTGCAACACAAT
GTGACTGGGAAGGGGCCGTTTGACAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTATCCAAACGTTCGGTGGCAACTAAATTTGGGTTTGAACTTTGAA
GGTTGTTGTTGTAATTTGTATTGGAAGTGAAAGTGTTGCGATGAATTGAAATTCTTTCGAGAGTTTGTGTTTTGGATGGTGTTGCAATGAAAATGTGATGCAACATATTA
GTGGATATCAGTGTACAGGGGTGGAGGGCTGCCATGTAGCTTCGATGTTGCTGTTGTTTAAATGACATGATCCTTCACTTGACATATGGTAGATGAATTGGGTCTTGCTT
CCTTCTACATTCACATTTTTCAATCATATTAAAACAGTGTTCCAAGTTGGGAAGAATGTGGCTACATCCTCTCTTATTATATCTAACCTTTTTCTATCCACTTGAACCTA
GATACAACGGCGGATCTTGAATTTTTTTTTTTTAAGGAGACTTAAATATAAAATTGAAAAAAATATTTTAAGTAAATCCGCCTTTGTCTAGATAACGTTATTGTTT
Protein sequenceShow/hide protein sequence
MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGML
LPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIV
QHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN