CuGenDBv2

Gene ID	Tan0004503
Organism	Trichosanthes anguina (Snake gourd v1)
Description	30S ribosomal protein S14, chloroplastic
Genome location	Contig00034:61245..61547
RNA-Seq Expression	Tan0004503
Synteny	Tan0004503
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001209 - Ribosomal protein S14 IPR018271 - Ribosomal protein S14, conserved site IPR023036 - Ribosomal protein S14, bacterial/plastid

Homology

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GenBank top hits

e value

%identity

Alignment

QZL38591.1 ribosomal protein S14 [Citrullus naudinianus]

1.4e-47

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSL++KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009317384.1 ribosomal protein S14 [Coccinia grandis]

6.1e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009752918.1 ribosomal protein S14 [Momordica sessilifolia]

1.0e-47

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009753872.1 ribosomal protein S14 [Trichosanthes lobata]

2.1e-48

100

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009945415.1 ribosomal protein S14 [Sechium edule]

1.4e-47

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKK+ISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE66 Ribosomal protein S14

2.9e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A2Z2CGL0 30S ribosomal protein S14, chloroplastic

2.9e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A6H0ESP9 30S ribosomal protein S14, chloroplastic

2.9e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A6H0EUX0 30S ribosomal protein S14, chloroplastic

1.0e-48

100

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A6M3RTR8 30S ribosomal protein S14, chloroplastic

2.9e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

SwissProt top hits

e value

%identity

Alignment

A6MM34 30S ribosomal protein S14, chloroplastic

9.7e-49

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKR+KLEQKYHLIRRS KKEISKVPSLS KWEIHGKLQSPPRNSAPTRLHRRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

B1NWE8 30S ribosomal protein S14, chloroplastic

7.4e-49

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHL+RRS KKEISKVPSLS KWEIHGKLQSPPRNSAPTRLHRRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q33C38 30S ribosomal protein S14, chloroplastic

1.7e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYH IRRS KKEISKVPSLS KWEI+GKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q3C1I0 30S ribosomal protein S14, chloroplastic

1.7e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYH IRRS KKEISKVPSLS KWEI+GKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q4VZN5 30S ribosomal protein S14, chloroplastic

8.8e-50

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIR+SLK EISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Arabidopsis top hits

e value

%identity

Alignment

AT2G34520.1 mitochondrial ribosomal protein S14

4.0e-05

35.48

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Query:  EKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHG--KLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        + +R+ L  ++ L RR L K   K P L  +       KL   PRNSA  R+  RC  TGR R+    F +S  + R +     L G T+SSW
Subjt:  EKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHG--KLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

ATCG00330.1 chloroplast ribosomal protein S14

1.4e-47

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MA+KSLI REKKRQKLE+KYHLIRRS KKEISK+PSLS+KW+IHGKLQSPPRNSAPTRLHRRCF TGRPRANYRDFGLSGHILREMV ACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Sequences

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CDS sequence

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ATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAAAAAGAAATAAGCAAAGTTCCATCGTT
GAGTAAGAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGAGAGCTAACTATC
GAGACTTTGGGCTATCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACCAGATCAAGTTGGTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSKKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Tan0004503 (gene) of Snake gourd v1 genome