; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004506 (gene) of Snake gourd v1 genome

Gene IDTan0004506
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:2184058..2184597
RNA-Seq ExpressionTan0004506
SyntenyTan0004506
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60682.1 hypothetical protein Csa_019276 [Cucumis sativus]3.0e-3370.87Show/hide
Query:  MSSSILSSQGMAMAFAALSGTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI--SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGG
        MSSSILSSQ MAMAFA   GTVI +L   LHKSHPSISSV KKKE EKKKK RK+VHF++DLAI  S+++L+RKK ++LGSS P+GR P   LT+ GGGG
Subjt:  MSSSILSSQGMAMAFAALSGTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI--SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGG

Query:  GGMPANRVALYNGILRDRLVQRMAYSL
        GG+PANR ALYNGILR+RLV R+AYSL
Subjt:  GGMPANRVALYNGILRDRLVQRMAYSL

XP_008457539.1 PREDICTED: uncharacterized protein LOC103497202 [Cucumis melo]1.2e-3475.59Show/hide
Query:  SSSILSSQGMAMAFAALS-GTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI--SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGG
        SSSILSSQ MAMAFAALS GTVI +L   LHKSHPSISSV +KKEMEKKKK RKRVHF++DLAI  S+EEL+RKK +ILGSS   GR     LT +GGGG
Subjt:  SSSILSSQGMAMAFAALS-GTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI--SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGG

Query:  GGMPANRVALYNGILRDRLVQRMAYSL
        GGMPANR ALYNGILRDRLV R+AYSL
Subjt:  GGMPANRVALYNGILRDRLVQRMAYSL

XP_022946910.1 uncharacterized protein LOC111450851 isoform X1 [Cucurbita moschata]7.3e-2769.17Show/hide
Query:  MAMAFAALSGTVIFLLCL--HKSHPSISSVGKKKE----MEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGGMPANR
        MAMA AALSG V  +L     KS  S+SS GK+K     ++KKKK RKRVHFA+D A+ S+EELQRK GLILG S P GR PP SLTS GGGG GMPANR
Subjt:  MAMAFAALSGTVIFLLCL--HKSHPSISSVGKKKE----MEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGGMPANR

Query:  VALYNGILRDRLVQRMAYSL
        VALYNGILRDRLV RMAYSL
Subjt:  VALYNGILRDRLVQRMAYSL

XP_022946911.1 uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata]4.3e-2769.83Show/hide
Query:  MAMAFAALSGTVIFLLCL--HKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGGMPANRVALY
        MAMA AALSG V  +L     KS  S+SSV     ++KKKK RKRVHFA+D A+ S+EELQRK GLILG S P GR PP SLTS GGGG GMPANRVALY
Subjt:  MAMAFAALSGTVIFLLCL--HKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGGMPANRVALY

Query:  NGILRDRLVQRMAYSL
        NGILRDRLV RMAYSL
Subjt:  NGILRDRLVQRMAYSL

XP_038890799.1 uncharacterized protein LOC120080255 [Benincasa hispida]1.5e-4082.54Show/hide
Query:  MSSSILSSQGMAMAFAALSGTVIFLL--CLHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGG
        MSSSILSSQ MAMAFAALSGTVI +L  CLHKS PSISSV KKKEMEKKKK RKRVHFA+DLAI  +EELQ KKGLILGSS P GR P   LTS GGGGG
Subjt:  MSSSILSSQGMAMAFAALSGTVIFLL--CLHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGG

Query:  GMPANRVALYNGILRDRLVQRMAYSL
        GMPANRVALYNGILRDRLV R+AYSL
Subjt:  GMPANRVALYNGILRDRLVQRMAYSL

TrEMBL top hitse value%identityAlignment
A0A0A0LIY8 Uncharacterized protein1.5e-3370.87Show/hide
Query:  MSSSILSSQGMAMAFAALSGTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI--SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGG
        MSSSILSSQ MAMAFA   GTVI +L   LHKSHPSISSV KKKE EKKKK RK+VHF++DLAI  S+++L+RKK ++LGSS P+GR P   LT+ GGGG
Subjt:  MSSSILSSQGMAMAFAALSGTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI--SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGG

Query:  GGMPANRVALYNGILRDRLVQRMAYSL
        GG+PANR ALYNGILR+RLV R+AYSL
Subjt:  GGMPANRVALYNGILRDRLVQRMAYSL

A0A1S3C5Q6 uncharacterized protein LOC1034972026.0e-3575.59Show/hide
Query:  SSSILSSQGMAMAFAALS-GTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI--SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGG
        SSSILSSQ MAMAFAALS GTVI +L   LHKSHPSISSV +KKEMEKKKK RKRVHF++DLAI  S+EEL+RKK +ILGSS   GR     LT +GGGG
Subjt:  SSSILSSQGMAMAFAALS-GTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI--SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGG

Query:  GGMPANRVALYNGILRDRLVQRMAYSL
        GGMPANR ALYNGILRDRLV R+AYSL
Subjt:  GGMPANRVALYNGILRDRLVQRMAYSL

A0A5A7V7G5 Uncharacterized protein2.6e-2260.8Show/hide
Query:  SSSILSSQGMAMAFAALS-GTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAISSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGG
        SSSILSSQ MAMAFAALS GTVI +L   LHKSHPSISS                      +  S+EEL+RKK +ILGSS   GR     LT +GGGGGG
Subjt:  SSSILSSQGMAMAFAALS-GTVIFLLC--LHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAISSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGG

Query:  MPANRVALYNGILRDRLVQRMAYSL
        MPANR ALYNGILRDRLV R+AYSL
Subjt:  MPANRVALYNGILRDRLVQRMAYSL

A0A6J1G4X1 uncharacterized protein LOC111450851 isoform X22.1e-2769.83Show/hide
Query:  MAMAFAALSGTVIFLLCL--HKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGGMPANRVALY
        MAMA AALSG V  +L     KS  S+SSV     ++KKKK RKRVHFA+D A+ S+EELQRK GLILG S P GR PP SLTS GGGG GMPANRVALY
Subjt:  MAMAFAALSGTVIFLLCL--HKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGGMPANRVALY

Query:  NGILRDRLVQRMAYSL
        NGILRDRLV RMAYSL
Subjt:  NGILRDRLVQRMAYSL

A0A6J1G5C3 uncharacterized protein LOC111450851 isoform X13.5e-2769.17Show/hide
Query:  MAMAFAALSGTVIFLLCL--HKSHPSISSVGKKKE----MEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGGMPANR
        MAMA AALSG V  +L     KS  S+SS GK+K     ++KKKK RKRVHFA+D A+ S+EELQRK GLILG S P GR PP SLTS GGGG GMPANR
Subjt:  MAMAFAALSGTVIFLLCL--HKSHPSISSVGKKKE----MEKKKKRRKRVHFAEDLAI-SSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGGMPANR

Query:  VALYNGILRDRLVQRMAYSL
        VALYNGILRDRLV RMAYSL
Subjt:  VALYNGILRDRLVQRMAYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTCCATTTTGAGCTCCCAAGGTATGGCTATGGCTTTTGCAGCTCTCTCAGGCACTGTCATCTTCCTCCTTTGCCTCCATAAATCCCACCCCTCAATTTCTTC
TGTGGGGAAGAAGAAAGAGATGGAGAAGAAGAAGAAGAGAAGAAAAAGAGTTCATTTTGCAGAGGATTTGGCCATTAGTAGTGAAGAGTTGCAGAGAAAAAAGGGCTTAA
TTTTGGGTTCATCGTCGCCGGCGGGAAGAGATCCGCCGCTGAGTTTGACGAGCGACGGCGGGGGAGGCGGAGGAATGCCGGCCAATAGGGTGGCGCTGTACAATGGAATC
TTAAGGGATCGTTTGGTTCAAAGGATGGCATATTCCCTTTAA
mRNA sequenceShow/hide mRNA sequence
AATTATTTCATATCATGTCTTCTTCCATTTTGAGCTCCCAAGGTATGGCTATGGCTTTTGCAGCTCTCTCAGGCACTGTCATCTTCCTCCTTTGCCTCCATAAATCCCAC
CCCTCAATTTCTTCTGTGGGGAAGAAGAAAGAGATGGAGAAGAAGAAGAAGAGAAGAAAAAGAGTTCATTTTGCAGAGGATTTGGCCATTAGTAGTGAAGAGTTGCAGAG
AAAAAAGGGCTTAATTTTGGGTTCATCGTCGCCGGCGGGAAGAGATCCGCCGCTGAGTTTGACGAGCGACGGCGGGGGAGGCGGAGGAATGCCGGCCAATAGGGTGGCGC
TGTACAATGGAATCTTAAGGGATCGTTTGGTTCAAAGGATGGCATATTCCCTTTAATTCAACAACTTTTATTGTCAAAAAATGTCTATTGATG
Protein sequenceShow/hide protein sequence
MSSSILSSQGMAMAFAALSGTVIFLLCLHKSHPSISSVGKKKEMEKKKKRRKRVHFAEDLAISSEELQRKKGLILGSSSPAGRDPPLSLTSDGGGGGGMPANRVALYNGI
LRDRLVQRMAYSL