; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004509 (gene) of Snake gourd v1 genome

Gene IDTan0004509
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNase H domain-containing protein
Genome locationLG07:73855112..73856204
RNA-Seq ExpressionTan0004509
SyntenyTan0004509
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1040.52Show/hide
Query:  KLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISK--EHAQRLMVESDFVEVIKVLNVEAFDLSELNDIANEI
        KLN+ ASW+E A +GG+ W I DS   S   E K+L+R+  +K LEGKA++EG   YL I +   ++ R ++   F+E+ ++LN    DL EL+++ +EI
Subjt:  KLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISK--EHAQRLMVESDFVEVIKVLNVEAFDLSELNDIANEI

Query:  HSIVGDVGIISFTKCP
          +    GIISF + P
Subjt:  HSIVGDVGIISFTKCP

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]4.2e-1234.38Show/hide
Query:  LIRRGLRENQTSHEGWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFVE
        LIRR   E+ T  + W+P     WKLNT+A+W    + GG+GW +RD +        + ++ +  I YLE  AI EG      I +EH + + +ESD +E
Subjt:  LIRRGLRENQTSHEGWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFVE

Query:  VIKVLNVEAFDLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVAAFNFLLEE
         I +L+ +  D +E+  +  EI  ++ D+ I+S     R  N+    LAR A  N L EE
Subjt:  VIKVLNVEAFDLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVAAFNFLLEE

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]2.5e-1233.33Show/hide
Query:  WRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLK-----ISKEHAQRLMVESDFVEVIKVLNVEAF
        W+P     WKLNTDA+W    + GG+GW +RD +      + + ++ +  I YLE  AI EG     +     I +EH + + +ESD +E I +L+ +  
Subjt:  WRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLK-----ISKEHAQRLMVESDFVEVIKVLNVEAF

Query:  DLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVAAFNFLLEE
        D +E+  +  EI  ++ D+ I+S     R  N+    LAR A  N L EE
Subjt:  DLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVAAFNFLLEE

XP_024042448.1 uncharacterized protein LOC112099303 [Citrus clementina]7.0e-0727.88Show/hide
Query:  KAKITAWRLIRRGLR-----ENQTSHEGWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKE
        +A + ++R I  G       + Q   + W+P P GC+K+N DA+ N +  +GG+G  +RDSR    A   ++   +  +  +E +A+L G  +  K +  
Subjt:  KAKITAWRLIRRGLR-----ENQTSHEGWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKE

Query:  HAQRLMVESDFVEVIKVLNVEAFDLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVA
        H    ++ESD  EV++++      L E++    EI   +      S    PR  N     LA+VA
Subjt:  HAQRLMVESDFVEVIKVLNVEAFDLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVA

XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]9.8e-0937.98Show/hide
Query:  GWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFV-EVIKVLNVEAFDLS
        GW P+    WKLN DASWN      GLGW   D         LK + R   +  LE  AI  G  I   +S      +MVESD + EVI +LN +  DLS
Subjt:  GWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFV-EVIKVLNVEAFDLS

Query:  ELNDIANEIHSIVGDVGIISFTKCPRSGN
        E++  + E     G++G+ISF+   R  N
Subjt:  ELNDIANEIHSIVGDVGIISFTKCPRSGN

TrEMBL top hitse value%identityAlignment
A0A5B7BI33 Uncharacterized protein (Fragment)3.7e-0631.55Show/hide
Query:  WRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKE-HAQRLMVESDFVEVIKVLNVEAFDLSE
        W P PE  +KLN D SW   +  GG+G  IRDSR L  A   K LK      Y E  A+  G    +  +KE     +++ESD + ++  +   + D S 
Subjt:  WRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKE-HAQRLMVESDFVEVIKVLNVEAFDLSE

Query:  LNDIANEIHSIVGDVGIISF--TKCPRSGNQSTQKLARVAAFNFLLEENASSSFVEEHSLFWIVNIPS
        +  I ++I    G VG+ SF      RS NQ+  ++A  A                +  L WI N+PS
Subjt:  LNDIANEIHSIVGDVGIISF--TKCPRSGNQSTQKLARVAAFNFLLEENASSSFVEEHSLFWIVNIPS

A0A6J1CP26 uncharacterized protein LOC1110134122.1e-1234.38Show/hide
Query:  LIRRGLRENQTSHEGWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFVE
        LIRR   E+ T  + W+P     WKLNT+A+W    + GG+GW +RD +        + ++ +  I YLE  AI EG      I +EH + + +ESD +E
Subjt:  LIRRGLRENQTSHEGWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFVE

Query:  VIKVLNVEAFDLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVAAFNFLLEE
         I +L+ +  D +E+  +  EI  ++ D+ I+S     R  N+    LAR A  N L EE
Subjt:  VIKVLNVEAFDLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVAAFNFLLEE

A0A6J1CQG0 uncharacterized protein LOC1110132162.9e-0636.73Show/hide
Query:  WRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFVEVIKVLNVEAFDLS
        W   P  CWKLNTDASW+E    GG+GW + D R         K++ +  I  LE   I+ G      I+ +    + +ESD VEVI+++  E  DL+
Subjt:  WRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFVEVIKVLNVEAFDLS

A0A6J1D4B6 uncharacterized protein LOC1110171812.2e-0629.5Show/hide
Query:  GWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSR-VLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFVEVIKVLNVEAFDLS
        GW P  +  WKLN DA+W ++   GGLGW +RDS      A+ LK L + L +                    E   ++ +ESD +EV+ ++N  +  L+
Subjt:  GWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSR-VLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLKISKEHAQRLMVESDFVEVIKVLNVEAFDLS

Query:  ELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVA
        E++ I  +I   +  + I  F   P   N     +AR A
Subjt:  ELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVA

A0A6J1DSV1 uncharacterized protein LOC1110236081.2e-1233.33Show/hide
Query:  WRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLK-----ISKEHAQRLMVESDFVEVIKVLNVEAF
        W+P     WKLNTDA+W    + GG+GW +RD +      + + ++ +  I YLE  AI EG     +     I +EH + + +ESD +E I +L+ +  
Subjt:  WRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEGHHIYLK-----ISKEHAQRLMVESDFVEVIKVLNVEAF

Query:  DLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVAAFNFLLEE
        D +E+  +  EI  ++ D+ I+S     R  N+    LAR A  N L EE
Subjt:  DLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVAAFNFLLEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTTCGAATTCGGACACAATGCCATCTAACCATAAGTGGAAGCGCTTCTCGAAGCTGGATGGGCCACCTAAAGCTAAAATTACAGCTTGGAGGCTCATTCGACG
AGGCTTGAGGGAGAACCAAACGAGTCATGAAGGTTGGCGTCCTACTCCAGAAGGATGCTGGAAACTCAACACCGACGCCTCCTGGAACGAAGCGGCCTCACAAGGGGGAT
TGGGTTGGACAATTCGTGACTCTCGGGTTCTCTCATCTGCGCAGGAATTAAAAAAACTCAAACGCCAATTACCAATTAAATATCTCGAAGGGAAAGCCATCCTTGAAGGC
CATCACATTTATCTGAAGATATCTAAGGAACATGCACAACGTTTGATGGTGGAATCTGACTTTGTAGAAGTAATTAAGGTGCTAAATGTTGAAGCGTTTGATCTCTCCGA
ATTGAATGACATCGCAAACGAAATTCACTCAATAGTTGGCGATGTTGGTATAATTTCCTTCACCAAATGTCCCAGATCGGGCAACCAATCGACCCAAAAGTTGGCGAGAG
TAGCTGCTTTCAATTTCCTTTTGGAAGAAAACGCCTCTTCTTCTTTTGTCGAAGAACACTCTCTCTTTTGGATTGTAAATATCCCCTCTTGGGTGTATTCCCTCGTTGAG
GAAGTTGGTGTATTGGTTTCCGTTGTCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTTCGAATTCGGACACAATGCCATCTAACCATAAGTGGAAGCGCTTCTCGAAGCTGGATGGGCCACCTAAAGCTAAAATTACAGCTTGGAGGCTCATTCGACG
AGGCTTGAGGGAGAACCAAACGAGTCATGAAGGTTGGCGTCCTACTCCAGAAGGATGCTGGAAACTCAACACCGACGCCTCCTGGAACGAAGCGGCCTCACAAGGGGGAT
TGGGTTGGACAATTCGTGACTCTCGGGTTCTCTCATCTGCGCAGGAATTAAAAAAACTCAAACGCCAATTACCAATTAAATATCTCGAAGGGAAAGCCATCCTTGAAGGC
CATCACATTTATCTGAAGATATCTAAGGAACATGCACAACGTTTGATGGTGGAATCTGACTTTGTAGAAGTAATTAAGGTGCTAAATGTTGAAGCGTTTGATCTCTCCGA
ATTGAATGACATCGCAAACGAAATTCACTCAATAGTTGGCGATGTTGGTATAATTTCCTTCACCAAATGTCCCAGATCGGGCAACCAATCGACCCAAAAGTTGGCGAGAG
TAGCTGCTTTCAATTTCCTTTTGGAAGAAAACGCCTCTTCTTCTTTTGTCGAAGAACACTCTCTCTTTTGGATTGTAAATATCCCCTCTTGGGTGTATTCCCTCGTTGAG
GAAGTTGGTGTATTGGTTTCCGTTGTCAATTAA
Protein sequenceShow/hide protein sequence
MEASNSDTMPSNHKWKRFSKLDGPPKAKITAWRLIRRGLRENQTSHEGWRPTPEGCWKLNTDASWNEAASQGGLGWTIRDSRVLSSAQELKKLKRQLPIKYLEGKAILEG
HHIYLKISKEHAQRLMVESDFVEVIKVLNVEAFDLSELNDIANEIHSIVGDVGIISFTKCPRSGNQSTQKLARVAAFNFLLEENASSSFVEEHSLFWIVNIPSWVYSLVE
EVGVLVSVVN