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Tan0004540 (gene) of Snake gourd v1 genome

Gene IDTan0004540
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG06:36060854..36070540
RNA-Seq ExpressionTan0004540
SyntenyTan0004540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038900633.1 uncharacterized protein LOC120087799 [Benincasa hispida]7.7e-1454.84Show/hide
Query:  PQTNCSLEEQWYLRHKINCTSKTRQPTDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCKVELQDGDALNAF
        P+TN S EE+                 D N+G  I+M +G I RSRAKKL QALITHIQAMV+S ++++EDV V  YMLCKVE QD DALNAF
Subjt:  PQTNCSLEEQWYLRHKINCTSKTRQPTDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCKVELQDGDALNAF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTGGCCAGATTTGCCGACTCAATATGCCTACCTTCTTGGAGACAAGACCGAGTGAGCGGCTGGGAACTTAACTTAGCAAGATGGAATTCACTCCTTCCCGGACT
CTGTTTGTTGGTAGGACCACAAACAAATTGTTCATTAGAGGAGCAATGGTACTTAAGGCACAAGATAAATTGCACTTCTAAAACCAGACAACCAACTGATATGAACCAAG
GACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTT
CTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTGGCCAGATTTGCCGACTCAATATGCCTACCTTCTTGGAGACAAGACCGAGTGAGCGGCTGGGAACTTAACTTAGCAAGATGGAATTCACTCCTTCCCGGACT
CTGTTTGTTGGTAGGACCACAAACAAATTGTTCATTAGAGGAGCAATGGTACTTAAGGCACAAGATAAATTGCACTTCTAAAACCAGACAACCAACTGATATGAACCAAG
GACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTT
CTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAA
Protein sequenceShow/hide protein sequence
MRVARFADSICLPSWRQDRVSGWELNLARWNSLLPGLCLLVGPQTNCSLEEQWYLRHKINCTSKTRQPTDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEV
LEDVGVFPYMLCKVELQDGDALNAF