; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004541 (gene) of Snake gourd v1 genome

Gene IDTan0004541
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein RALF-like 32
Genome locationLG10:11328262..11329064
RNA-Seq ExpressionTan0004541
SyntenyTan0004541
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067637.1 protein RALF-like 32 [Cucumis melo var. makuwa]4.4e-3676.52Show/hide
Query:  MSLQPCFLLLLLLL----FLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNP
        MSLQPCFLLLLLLL     LQDL L+RA +T S NGS   CGS E+EMLMESEISRRFL QQKKYISIGALKKD PACDG+  G+PYTK+GSC PPP NP
Subjt:  MSLQPCFLLLLLLL----FLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNP

Query:  YNRGCSKIYRCRSDD
        Y+RGC KIYRCRSDD
Subjt:  YNRGCSKIYRCRSDD

XP_004147646.3 protein RALF-like 32 [Cucumis sativus]1.7e-3577.68Show/hide
Query:  MSLQPCFLLLL-LLLFL-QDLGLLRAMTTSSSNGSCG--SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNR
        MSLQ CFLLLL L LFL QDL L+RA +T S NGS    + EEEMLMESEI+RRFLEQQKKYISIGALKKD PACDG+  GQPYT++GSC PPP NPYNR
Subjt:  MSLQPCFLLLL-LLLFL-QDLGLLRAMTTSSSNGSCG--SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNR

Query:  GCSKIYRCRSDD
        GCSKIYRCRSDD
Subjt:  GCSKIYRCRSDD

XP_022138047.1 protein RALF-like 32 [Momordica charantia]5.4e-3478.5Show/hide
Query:  QPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCG--SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKI
        QP FLLLL L  LQ L LLRA   S  NGS    + E+EMLMESEISRRFLEQQKKYISIGALKKDRPACDGSG GQPYTK+GSC PPP+NPY+RGCSKI
Subjt:  QPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCG--SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKI

Query:  YRCRSDD
        YRCRSDD
Subjt:  YRCRSDD

XP_023528073.1 protein RALF-like 32 [Cucurbita pepo subsp. pepo]2.0e-3377.36Show/hide
Query:  CFLLLLLLLFLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIY
        CFLL LLL  +QDL L+RA +  S NGS   CG  EEE LMESEISRRFLEQQKKYISIGALKKD PACDG G GQPYT++GSC PPP NPYNRGCSKIY
Subjt:  CFLLLLLLLFLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIY

Query:  RCRSDD
        RCRSDD
Subjt:  RCRSDD

XP_038900965.1 protein RALF-like 32 [Benincasa hispida]1.2e-3680.91Show/hide
Query:  LQPCFLLL-LLLLFLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGC
        LQ CFLLL L LL LQDL L+RA++  S NGS   CGS EEEMLMESEISRRFLEQ KKYISIGALKKD PACDGSG GQPYTK+GSC PPPTNPY RGC
Subjt:  LQPCFLLL-LLLLFLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGC

Query:  SKIYRCRSDD
        SKIYRCRSDD
Subjt:  SKIYRCRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0L9A8 Uncharacterized protein8.1e-3677.68Show/hide
Query:  MSLQPCFLLLL-LLLFL-QDLGLLRAMTTSSSNGSCG--SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNR
        MSLQ CFLLLL L LFL QDL L+RA +T S NGS    + EEEMLMESEI+RRFLEQQKKYISIGALKKD PACDG+  GQPYT++GSC PPP NPYNR
Subjt:  MSLQPCFLLLL-LLLFL-QDLGLLRAMTTSSSNGSCG--SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNR

Query:  GCSKIYRCRSDD
        GCSKIYRCRSDD
Subjt:  GCSKIYRCRSDD

A0A2P6QW25 Putative rapid ALkalinization Factor8.7e-2255.75Show/hide
Query:  MSLQPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCGSE------EEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPY
        +SLQ CF+LLLL      L  L A  +  S+ +C         E E+LM+SEISRRFL Q  KYIS GAL+KD+P C+G   G+ Y+KTG C PPP NPY
Subjt:  MSLQPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCGSE------EEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPY

Query:  NRGCSKIYRCRSD
        NRGCSK YRCRSD
Subjt:  NRGCSKIYRCRSD

A0A5A7VKE5 Protein RALF-like 322.1e-3676.52Show/hide
Query:  MSLQPCFLLLLLLL----FLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNP
        MSLQPCFLLLLLLL     LQDL L+RA +T S NGS   CGS E+EMLMESEISRRFL QQKKYISIGALKKD PACDG+  G+PYTK+GSC PPP NP
Subjt:  MSLQPCFLLLLLLL----FLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNP

Query:  YNRGCSKIYRCRSDD
        Y+RGC KIYRCRSDD
Subjt:  YNRGCSKIYRCRSDD

A0A6J1C9Y4 protein RALF-like 322.6e-3478.5Show/hide
Query:  QPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCG--SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKI
        QP FLLLL L  LQ L LLRA   S  NGS    + E+EMLMESEISRRFLEQQKKYISIGALKKDRPACDGSG GQPYTK+GSC PPP+NPY+RGCSKI
Subjt:  QPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCG--SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKI

Query:  YRCRSDD
        YRCRSDD
Subjt:  YRCRSDD

A0A6J1GXB3 protein RALF-like 324.9e-3376.42Show/hide
Query:  CFLLLLLLLFLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIY
        CFLL LLL  +QDL L+RA +  S NGS   CG  E+E LMESEISRRFL QQKKYISIGALKKD PACDG G GQPYTK+GSC PPP NPYNRGCSKIY
Subjt:  CFLLLLLLLFLQDLGLLRAMTTSSSNGS---CGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIY

Query:  RCRSDD
        RCRSDD
Subjt:  RCRSDD

SwissProt top hitse value%identityAlignment
O23262 Protein RALF-like 327.1e-1337.29Show/hide
Query:  MSLQPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCG-----------SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPP
        M ++P  +   + +F   L L    + +SS+  C            +EE  ++MES  S+R  E+Q   +S GAL++++PACDG   G+ Y+    C PP
Subjt:  MSLQPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCG-----------SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPP

Query:  PTNPYNRGCSKIYRCRSD
        P+NPY+RGCSK YRC  D
Subjt:  PTNPYNRGCSKIYRCRSD

Q945T0 Rapid alkalinization factor2.4e-0848.05Show/hide
Query:  SNGSCGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRS
        S G C +EEEE  ++SE +RR L   KKYIS GAL+K+   C   G      K G+      NPY+RGCS I RCRS
Subjt:  SNGSCGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRS

Q9LK37 Protein RALF-like 249.0e-0842.86Show/hide
Query:  NGSCGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRSD
        NG  G EE E +M SEISRR +  +K+YIS   L++D   C      +P     +C     N YNRGCS I RC  D
Subjt:  NGSCGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRSD

Q9MA62 Protein RALF-like 222.4e-0842.27Show/hide
Query:  FLQDLGLLRAMTTSSSNGSCGS------EEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCR
        F   L  +RA ++S  +G  GS      EEEEM  +S+ISRR L  QKKYIS GA++++   C   G      + G+      NPY+RGCS I RCR
Subjt:  FLQDLGLLRAMTTSSSNGSCGS------EEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCR

Q9SRY3 Protein RALF-like 12.0e-0741Show/hide
Query:  FLQDLGLLRAMTTSSSNGSC--------GSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRS
        F  DLG +   TT  +   C        G+EEEE  M+SEI+RR L    KYIS  +LK++   C   G      + G+      NPY+RGCSKI RCRS
Subjt:  FLQDLGLLRAMTTSSSNGSC--------GSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 11.4e-0841Show/hide
Query:  FLQDLGLLRAMTTSSSNGSC--------GSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRS
        F  DLG +   TT  +   C        G+EEEE  M+SEI+RR L    KYIS  +LK++   C   G      + G+      NPY+RGCSKI RCRS
Subjt:  FLQDLGLLRAMTTSSSNGSC--------GSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRS

AT3G05490.1 ralf-like 221.7e-0942.27Show/hide
Query:  FLQDLGLLRAMTTSSSNGSCGS------EEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCR
        F   L  +RA ++S  +G  GS      EEEEM  +S+ISRR L  QKKYIS GA++++   C   G      + G+      NPY+RGCS I RCR
Subjt:  FLQDLGLLRAMTTSSSNGSCGS------EEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCR

AT3G23805.1 ralf-like 246.4e-0942.86Show/hide
Query:  NGSCGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRSD
        NG  G EE E +M SEISRR +  +K+YIS   L++D   C      +P     +C     N YNRGCS I RC  D
Subjt:  NGSCGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRSD

AT4G14010.1 ralf-like 325.0e-1437.29Show/hide
Query:  MSLQPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCG-----------SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPP
        M ++P  +   + +F   L L    + +SS+  C            +EE  ++MES  S+R  E+Q   +S GAL++++PACDG   G+ Y+    C PP
Subjt:  MSLQPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCG-----------SEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPP

Query:  PTNPYNRGCSKIYRCRSD
        P+NPY+RGCSK YRC  D
Subjt:  PTNPYNRGCSKIYRCRSD

AT4G15800.1 ralf-like 331.1e-0533.88Show/hide
Query:  MSLQPCFLLLLLLLFLQDLGLLRAMTTSSSNG----------------SCGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTG
        +S +P  +++ +L     +  L A  TS S+G                S  + EEE  M+SEI+RR L    KYIS GAL+++   C   G      + G
Subjt:  MSLQPCFLLLLLLLFLQDLGLLRAMTTSSSNG----------------SCGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTG

Query:  SCTPPPTNPYNRGCSKIYRCR
        +      NPY+RGCS I RCR
Subjt:  SCTPPPTNPYNRGCSKIYRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTACAACCTTGCTTTCTTCTTCTTCTTCTTCTCCTCTTCCTCCAAGATCTTGGTCTCCTTCGAGCTATGACGACGAGCTCTTCCAATGGCTCGTGTGGTAGCGA
GGAGGAGGAGATGTTGATGGAATCTGAAATAAGTCGAAGGTTTCTCGAACAACAAAAGAAGTACATCTCAATTGGAGCTCTTAAAAAGGATCGACCCGCTTGCGATGGTA
GCGGTAACGGCCAACCTTACACCAAAACCGGAAGCTGCACTCCACCGCCGACTAATCCTTACAATCGAGGTTGCTCTAAGATATATCGTTGTAGGTCTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
GTTTCTCTATATATTCTTTTTCACTCCATCATTAAAAATGAAAATAAATAAAAACATTCTAAGGAATAATATCTATAAAGTTTCTCCCATTGGTAAAGAAAGAAGCAAAT
GAAATAAGGCAAAAAGAGCCCATCAAAGTCAGAAAAGCATAAGAAGATCAAGAATCTCTCAAAGCCAAGCCAAGCCAATGTCTTTACAACCTTGCTTTCTTCTTCTTCTT
CTTCTCCTCTTCCTCCAAGATCTTGGTCTCCTTCGAGCTATGACGACGAGCTCTTCCAATGGCTCGTGTGGTAGCGAGGAGGAGGAGATGTTGATGGAATCTGAAATAAG
TCGAAGGTTTCTCGAACAACAAAAGAAGTACATCTCAATTGGAGCTCTTAAAAAGGATCGACCCGCTTGCGATGGTAGCGGTAACGGCCAACCTTACACCAAAACCGGAA
GCTGCACTCCACCGCCGACTAATCCTTACAATCGAGGTTGCTCTAAGATATATCGTTGTAGGTCTGATGATTGATGGTTTGAAAAAACCTTAGTATGCTTGGTAGAATTT
TTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCTTCTTGTGTTCTTGTTGGTTGATGAAGTTATTTGCTTCTTTGTAATGGGATTTTCTTTTTCTTTGTGATCT
CATTTTTTGTTTTTGGCAAATAAGAGAAGAGAGATAGAAATGTTAGACAAGTTTGGGTTGGATAAATCATGTTGTCCATGTAAAGTGAGAGCCAACATCATACCTAATCT
TATCTTTTGGATTGCATGGGAATTTGTTGGGGT
Protein sequenceShow/hide protein sequence
MSLQPCFLLLLLLLFLQDLGLLRAMTTSSSNGSCGSEEEEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGNGQPYTKTGSCTPPPTNPYNRGCSKIYRCRSDD