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Tan0004578 (gene) of Snake gourd v1 genome

Gene IDTan0004578
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMuDRA-like transposase
Genome locationLG04:77848026..77848894
RNA-Seq ExpressionTan0004578
SyntenyTan0004578
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154925.1 uncharacterized protein LOC111022071 [Momordica charantia]2.7e-1332.73Show/hide
Query:  KCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVPKQL
        K +F+RFGG WE+NT +Y GG++ GI+VPLT+TY+EL++ ++ +  +D++ YD+ +RV ++    SPPM++ ++ D+ F      V++V ++++T+P++ 
Subjt:  KCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVPKQL

Query:  LMDCGKTENDTSDDPEYNPLHEVEMEEEDEDDDEEGSEENRDDDHDDDKYMVQDDMYETDTVYSS
        +       N   D  +  P      EE     DE G          +D YM   DMY +D  ++S
Subjt:  LMDCGKTENDTSDDPEYNPLHEVEMEEEDEDDDEEGSEENRDDDHDDDKYMVQDDMYETDTVYSS

XP_038888098.1 uncharacterized protein LOC120078004 [Benincasa hispida]3.6e-1844.33Show/hide
Query:  MENKCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWIT
        M  KCV  R+G  W+EN   Y GG++TGIVVP+T+ Y+E ++ IY + +++   +DV MRVK+  D+ +PP+YI N+ DV  F    D++RVQ+++T
Subjt:  MENKCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWIT

XP_038891938.1 uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]1.5e-1131.5Show/hide
Query:  FGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWIT---TVPKQLLMD
        +GG+W+EN  +   GQ+ GI+VP+++ YEE++S IY +T++    +D+ ++VK+  +Y +PP YI N+  + F     D++R+Q+ +T    V + + M 
Subjt:  FGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWIT---TVPKQLLMD

Query:  CGKTE-NDTSDDPEYNPLHEVEMEEED
              +DT+ + +Y   ++   EE D
Subjt:  CGKTE-NDTSDDPEYNPLHEVEMEEED

XP_038891939.1 uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]1.5e-1131.5Show/hide
Query:  FGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWIT---TVPKQLLMD
        +GG+W+EN  +   GQ+ GI+VP+++ YEE++S IY +T++    +D+ ++VK+  +Y +PP YI N+  + F     D++R+Q+ +T    V + + M 
Subjt:  FGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWIT---TVPKQLLMD

Query:  CGKTE-NDTSDDPEYNPLHEVEMEEED
              +DT+ + +Y   ++   EE D
Subjt:  CGKTE-NDTSDDPEYNPLHEVEMEEED

XP_038902319.1 trichohyalin-like [Benincasa hispida]8.6e-1248.65Show/hide
Query:  MENKCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYI
        M  KCV + + G W+EN   Y GG++ GIVVP+T+ YEEL++ IY I +I    +DV MRVK+  D+ +PP YI
Subjt:  MENKCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYI

TrEMBL top hitse value%identityAlignment
A0A5A7T2N3 MuDRA-like transposase3.3e-0932.99Show/hide
Query:  VFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMR--VKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVP
        + VR GGEW+E    Y GG + GIVVP  IT+++L+SE+Y +  +D   +D+++R   +   +  +PP  ++N+RD+ F+    ++  V ++++  P
Subjt:  VFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMR--VKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVP

A0A5A7T2Y6 MuDRA-like transposase3.7e-0831.96Show/hide
Query:  VFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMR--VKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVP
        + VR GG W+E    Y GG + GIVVP  IT+++L+SE+Y +  +D   +D+++R   +   +  +PP  ++N+RD+ F+    +   V ++++  P
Subjt:  VFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMR--VKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVP

A0A5A7UB55 MuDRA-like transposase1.5e-0933.33Show/hide
Query:  MENKCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMR--VKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITT
        M +  + VR GGEW+E    Y GG + GIVVP  IT+++L+SE+Y +  +D   +D+++R   K   +  +PP  ++N+RD+ F+    +   V ++++ 
Subjt:  MENKCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMR--VKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITT

Query:  VP
         P
Subjt:  VP

A0A5A7VNP6 MuDRA-like transposase7.4e-0932.99Show/hide
Query:  VFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMR--VKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVP
        + VR GGEW+E    Y GG + GIVVP  IT+++L+SE+Y +  +D   +D+++R   +   +  +PP  ++N+RD+ F+    +   V ++++  P
Subjt:  VFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMR--VKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVP

A0A6J1DL08 uncharacterized protein LOC1110220711.3e-1332.73Show/hide
Query:  KCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVPKQL
        K +F+RFGG WE+NT +Y GG++ GI+VPLT+TY+EL++ ++ +  +D++ YD+ +RV ++    SPPM++ ++ D+ F      V++V ++++T+P++ 
Subjt:  KCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVPKQL

Query:  LMDCGKTENDTSDDPEYNPLHEVEMEEEDEDDDEEGSEENRDDDHDDDKYMVQDDMYETDTVYSS
        +       N   D  +  P      EE     DE G          +D YM   DMY +D  ++S
Subjt:  LMDCGKTENDTSDDPEYNPLHEVEMEEEDEDDDEEGSEENRDDDHDDDKYMVQDDMYETDTVYSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAAGTGTGTGTTCGTTAGATTTGGCGGTGAATGGGAAGAGAATACATGTACTTATACCGGAGGTCAAATGACAGGTATCGTTGTGCCACTAACGATAACATA
CGAAGAATTACGATCAGAGATTTATATTATTACGTCTATAGACGAGCATTCATATGACGTTGAAATGAGAGTGAAATTCAATACGGACTACCCATCTCCACCAATGTACA
TAAACAACAATCGAGATGTTGTGTTTTTTTTTAATCACCCGGATGTTGCAAGAGTCCAAATATGGATAACTACTGTACCGAAACAACTCCTCATGGACTGTGGGAAAACT
GAGAACGACACAAGTGACGACCCGGAATACAATCCTTTACACGAAGTAGAAATGGAAGAAGAAGACGAAGATGACGATGAAGAGGGATCCGAAGAGAACAGGGACGATGA
CCACGACGATGATAAATACATGGTACAGGACGACATGTACGAAACAGATACCGTATATTCGTCGGAAGACGTGGAAGAATGCATGGACGATGGATACGTTCCAACTCATG
GTCCGCTTTTTGACAACGTACTGGATACGGACTGGTTTGGCTTATCCAACAACTTGAACGACTCTCAGGTAACTCAGGGAGGTCCCTTACACCAATGGAGTGATTACTCA
ATTGACGATGTCAATATACCCGATGCACAACCCAACACCCAACCACATAGTTGCACAATAATGGAGAACGACGACGACATTAACTTGGTGGGCCATGGGTCACCAATCGT
ACAGCAGCCAATCGAACAATGTGGCGTAAGTGGTACAAAGAGTCCATCCGCTCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAAGTGTGTGTTCGTTAGATTTGGCGGTGAATGGGAAGAGAATACATGTACTTATACCGGAGGTCAAATGACAGGTATCGTTGTGCCACTAACGATAACATA
CGAAGAATTACGATCAGAGATTTATATTATTACGTCTATAGACGAGCATTCATATGACGTTGAAATGAGAGTGAAATTCAATACGGACTACCCATCTCCACCAATGTACA
TAAACAACAATCGAGATGTTGTGTTTTTTTTTAATCACCCGGATGTTGCAAGAGTCCAAATATGGATAACTACTGTACCGAAACAACTCCTCATGGACTGTGGGAAAACT
GAGAACGACACAAGTGACGACCCGGAATACAATCCTTTACACGAAGTAGAAATGGAAGAAGAAGACGAAGATGACGATGAAGAGGGATCCGAAGAGAACAGGGACGATGA
CCACGACGATGATAAATACATGGTACAGGACGACATGTACGAAACAGATACCGTATATTCGTCGGAAGACGTGGAAGAATGCATGGACGATGGATACGTTCCAACTCATG
GTCCGCTTTTTGACAACGTACTGGATACGGACTGGTTTGGCTTATCCAACAACTTGAACGACTCTCAGGTAACTCAGGGAGGTCCCTTACACCAATGGAGTGATTACTCA
ATTGACGATGTCAATATACCCGATGCACAACCCAACACCCAACCACATAGTTGCACAATAATGGAGAACGACGACGACATTAACTTGGTGGGCCATGGGTCACCAATCGT
ACAGCAGCCAATCGAACAATGTGGCGTAAGTGGTACAAAGAGTCCATCCGCTCCGTAA
Protein sequenceShow/hide protein sequence
MENKCVFVRFGGEWEENTCTYTGGQMTGIVVPLTITYEELRSEIYIITSIDEHSYDVEMRVKFNTDYPSPPMYINNNRDVVFFFNHPDVARVQIWITTVPKQLLMDCGKT
ENDTSDDPEYNPLHEVEMEEEDEDDDEEGSEENRDDDHDDDKYMVQDDMYETDTVYSSEDVEECMDDGYVPTHGPLFDNVLDTDWFGLSNNLNDSQVTQGGPLHQWSDYS
IDDVNIPDAQPNTQPHSCTIMENDDDINLVGHGSPIVQQPIEQCGVSGTKSPSAP