; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0004609 (gene) of Snake gourd v1 genome

Gene IDTan0004609
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationLG09:52686845..52687354
RNA-Seq ExpressionTan0004609
SyntenyTan0004609
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]1.2e-3549.08Show/hide
Query:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA
        MANA     P + ++   F+NPPLNQ+LNQ+TT+KLDR N+LLWK L+LPIL+  ++EGHL     CP  F    ++   + +     A    S+     
Subjt:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA

Query:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI
        ++NPL+E WV TD LLLGWLYNSMT +V  Q+MG+   +DLWDA Q  F +QSRAEED+LRQ+
Subjt:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]1.2e-3549.08Show/hide
Query:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA
        MANA     P + ++   F+NPPLNQ+LNQ+TT+KLDR N+LLWK L+LPIL+  ++EGHL     CP  F    ++   + +     A    S+     
Subjt:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA

Query:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI
        ++NPL+E WV TD LLLGWLYNSMT +V  Q+MG+   +DLWDA Q  F +QSRAEED+LRQ+
Subjt:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI

XP_016902204.1 PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]1.2e-3549.08Show/hide
Query:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA
        MANA     P + ++   F+NPPLNQ+LNQ+TT+KLDR N+LLWK L+LPIL+  ++EGHL     CP  F    ++   + +     A    S+     
Subjt:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA

Query:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI
        ++NPL+E WV TD LLLGWLYNSMT +V  Q+MG+   +DLWDA Q  F +QSRAEED+LRQ+
Subjt:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]1.2e-3549.08Show/hide
Query:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA
        MANA     P + ++   F+NPPLNQ+LNQ+TT+KLDR N+LLWK L+LPIL+  ++EGHL     CP  F    ++   + +     A    S+     
Subjt:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA

Query:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI
        ++NPL+E WV TD LLLGWLYNSMT +V  Q+MG+   +DLWDA Q  F +QSRAEED+LRQ+
Subjt:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI

XP_038887015.1 uncharacterized protein LOC120077182 [Benincasa hispida]2.0e-3551.53Show/hide
Query:  ADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQI--TTEGASSSSNVVGAVSTPSTEGIEAM
        A++I   S+      F+ PPLNQLLNQ+T  KL+R  F+LWK L+LPILR  ++E HL GT IC  MF      + E     S   G  S+ +    E  
Subjt:  ADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQI--TTEGASSSSNVVGAVSTPSTEGIEAM

Query:  INPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQIF
         NPLYE WV  DQLLLGW YNSMT EV  Q+MG+E+ K LWDA+ +LF +QSRAE+DYLRQ+F
Subjt:  INPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQIF

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X15.7e-3649.08Show/hide
Query:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA
        MANA     P + ++   F+NPPLNQ+LNQ+TT+KLDR N+LLWK L+LPIL+  ++EGHL     CP  F    ++   + +     A    S+     
Subjt:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA

Query:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI
        ++NPL+E WV TD LLLGWLYNSMT +V  Q+MG+   +DLWDA Q  F +QSRAEED+LRQ+
Subjt:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X45.7e-3649.08Show/hide
Query:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA
        MANA     P + ++   F+NPPLNQ+LNQ+TT+KLDR N+LLWK L+LPIL+  ++EGHL     CP  F    ++   + +     A    S+     
Subjt:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA

Query:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI
        ++NPL+E WV TD LLLGWLYNSMT +V  Q+MG+   +DLWDA Q  F +QSRAEED+LRQ+
Subjt:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X35.7e-3649.08Show/hide
Query:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA
        MANA     P + ++   F+NPPLNQ+LNQ+TT+KLDR N+LLWK L+LPIL+  ++EGHL     CP  F    ++   + +     A    S+     
Subjt:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA

Query:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI
        ++NPL+E WV TD LLLGWLYNSMT +V  Q+MG+   +DLWDA Q  F +QSRAEED+LRQ+
Subjt:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI

A0A1S4E2K3 uncharacterized protein LOC107991581 isoform X55.7e-3649.08Show/hide
Query:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA
        MANA     P + ++   F+NPPLNQ+LNQ+TT+KLDR N+LLWK L+LPIL+  ++EGHL     CP  F    ++   + +     A    S+     
Subjt:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA

Query:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI
        ++NPL+E WV TD LLLGWLYNSMT +V  Q+MG+   +DLWDA Q  F +QSRAEED+LRQ+
Subjt:  MINPLYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI

A0A5A7SIT7 Uncharacterized protein3.7e-3550.6Show/hide
Query:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA
        MANA     P + ++   F+NPPLNQ+LNQ+ T+KLDR N+LLWK L+LPIL+  ++EGHL G   CP  F        ASSS+  V      +T G  +
Subjt:  MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEA

Query:  MINP-----LYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI
         I P     L+E WV TD LLLGWLYNSMT +V  Q+MG+   +DLWDA Q  F +QSRAEED+LRQ+
Subjt:  MINP-----LYESWVITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGCCGACTCAATCCGAGATCCTTCCAATTTTGCAGCACAACCTCACTTTAACAATCCTCCACTAAACCAATTGTTGAATCAGGTGACCACACTAAAGTTAGA
TCGAGATAATTTCTTGTTGTGGAAGAATCTATCTCTCCCAATTCTCCGTAGCTCCAGGATTGAAGGTCACCTGTTAGGAACAAATATCTGCCCACTTATGTTTCATCAAC
AAATCACCACAGAAGGGGCTTCATCTAGTTCGAATGTTGTTGGAGCAGTATCGACGCCTTCAACAGAAGGAATAGAAGCAATGATCAATCCCCTATACGAGTCTTGGGTC
ATAACTGATCAATTGTTGTTGGGCTGGCTGTATAATTCCATGACCTCTGAAGTTACAACTCAGGTAATGGGATACGAAACAACAAAAGACCTCTGGGATGCAGTTCAAAC
ATTATTTGACATTCAATCAAGGGCAGAGGAAGACTACCTTCGACAAATCTTTCCAAACGAGGAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACGCCGACTCAATCCGAGATCCTTCCAATTTTGCAGCACAACCTCACTTTAACAATCCTCCACTAAACCAATTGTTGAATCAGGTGACCACACTAAAGTTAGA
TCGAGATAATTTCTTGTTGTGGAAGAATCTATCTCTCCCAATTCTCCGTAGCTCCAGGATTGAAGGTCACCTGTTAGGAACAAATATCTGCCCACTTATGTTTCATCAAC
AAATCACCACAGAAGGGGCTTCATCTAGTTCGAATGTTGTTGGAGCAGTATCGACGCCTTCAACAGAAGGAATAGAAGCAATGATCAATCCCCTATACGAGTCTTGGGTC
ATAACTGATCAATTGTTGTTGGGCTGGCTGTATAATTCCATGACCTCTGAAGTTACAACTCAGGTAATGGGATACGAAACAACAAAAGACCTCTGGGATGCAGTTCAAAC
ATTATTTGACATTCAATCAAGGGCAGAGGAAGACTACCTTCGACAAATCTTTCCAAACGAGGAAAGGTAA
Protein sequenceShow/hide protein sequence
MANADSIRDPSNFAAQPHFNNPPLNQLLNQVTTLKLDRDNFLLWKNLSLPILRSSRIEGHLLGTNICPLMFHQQITTEGASSSSNVVGAVSTPSTEGIEAMINPLYESWV
ITDQLLLGWLYNSMTSEVTTQVMGYETTKDLWDAVQTLFDIQSRAEEDYLRQIFPNEER