| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6598510.1 DNA-directed RNA polymerase I subunit RPA12, partial [Cucurbita argyrosperma subsp. sororia] | 6.3e-57 | 96.55 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSR HDFLFCNLCGTMLSFSSTKYV CPLCKS+RSAKE+VGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_022144336.1 DNA-directed RNA polymerase I subunit RPA12-like [Momordica charantia] | 2.4e-56 | 94.83 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSR HDFLFCNLCGTMLSFSSTKYV CPLCKS+RSAKE++GREISYTVTAEEIRKQLGISLIDEEK+QLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_022962626.1 DNA-directed RNA polymerase I subunit RPA12-like [Cucurbita moschata] | 4.1e-56 | 95.69 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYS HDFLFCNLCGTMLSFSSTKYV CPLCKS+RSAKE+VGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_023546814.1 DNA-directed RNA polymerase I subunit RPA12-like [Cucurbita pepo subsp. pepo] | 6.3e-57 | 96.55 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSR HDFLFCNLCGTMLSFSSTKYV CPLCKS+RSAKE+VGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_038886279.1 DNA-directed RNA polymerase I subunit RPA12-like isoform X1 [Benincasa hispida] | 1.1e-56 | 95.69 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSR HDFLFCNLCGTMLSFSSTKYV CPLCKS+RSAKE++GREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LKC4 DNA-directed RNA polymerase subunit | 1.3e-55 | 93.97 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSR HDFLFCNLCGTMLSF STKYV CP CKS+RSAKE+VGREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A1S3BBZ4 DNA-directed RNA polymerase subunit | 4.9e-55 | 93.97 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSR HDFLFCNLCGTMLSF STKYV CPLCKSKRSAKE+ GREISYTVTAEEIRKQLGISLI EEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1CTE6 DNA-directed RNA polymerase subunit | 1.2e-56 | 94.83 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSR HDFLFCNLCGTMLSFSSTKYV CPLCKS+RSAKE++GREISYTVTAEEIRKQLGISLIDEEK+QLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1HDS4 DNA-directed RNA polymerase subunit | 2.0e-56 | 95.69 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYS HDFLFCNLCGTMLSFSSTKYV CPLCKS+RSAKE+VGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1KC19 DNA-directed RNA polymerase subunit | 2.6e-56 | 94.83 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSR HDFLFCNLCGTMLSFSSTKYV CPLCKS+RSAK ++GREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 | 5.5e-11 | 33.33 | Show/hide |
Query: SRRHDFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTT
S + D FC CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT
Subjt: SRRHDFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTT
Query: FYTCTKCHHQTREN
FYTCT C Q +E+
Subjt: FYTCTKCHHQTREN
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| Q1XHV8 DNA-directed RNA polymerase I subunit RPA12 | 9.3e-11 | 33.33 | Show/hide |
Query: SRRHDFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTT
S + D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT
Subjt: SRRHDFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTT
Query: FYTCTKCHHQTREN
FYTCT C Q +E+
Subjt: FYTCTKCHHQTREN
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| Q5TM50 DNA-directed RNA polymerase I subunit RPA12 | 5.5e-11 | 33.33 | Show/hide |
Query: SRRHDFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTT
S + D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT
Subjt: SRRHDFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTT
Query: FYTCTKCHHQTREN
FYTCT C Q +E+
Subjt: FYTCTKCHHQTREN
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| Q6MFY5 DNA-directed RNA polymerase I subunit RPA12 | 2.1e-10 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC CG++L + V+CP C ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
C Q +E+
Subjt: TKCHHQTREN
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| Q9P1U0 DNA-directed RNA polymerase I subunit RPA12 | 9.3e-11 | 33.33 | Show/hide |
Query: SRRHDFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTT
S + D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT
Subjt: SRRHDFLFCNLCGTMLSFSSTK-YVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTT
Query: FYTCTKCHHQTREN
FYTCT C Q +E+
Subjt: FYTCTKCHHQTREN
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G01210.1 DNA-directed RNA polymerase, subunit M, archaeal | 4.2e-06 | 27.1 | Show/hide |
Query: FCNLCGTMLSF--SSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTK
FC CG +L + C C + R++ ++K + + ++ ++ C +CG+D+A+F+S Q+RSADE ++ FY C K
Subjt: FCNLCGTMLSF--SSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTK
Query: CHHQTRE
C RE
Subjt: CHHQTRE
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| AT1G20065.1 FUNCTIONS IN: molecular_function unknown | 3.4e-16 | 58.06 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGIS
M SR D LFCNLCGTML STKY CPLC++ R+ KE++ + ++YTVT E+IR++LGIS
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGIS
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| AT1G20065.2 FUNCTIONS IN: molecular_function unknown | 1.7e-12 | 56.6 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAE
M SR D LFCNLCGTML STKY CPLC++ R+ KE++ + ++YTVT E
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAE
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| AT3G25940.1 TFIIB zinc-binding protein | 1.1e-30 | 54.24 | Show/hide |
Query: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEE---KMQLSKERRRCEKCGNDEAWFESRQMRSAD
M SR +FLFCNLCGTML STKY CP CK+ R+AK+++ +EI+YTV+AE+IR++LGISL E+ + +L K ++ CEKC + E + +RQ RSAD
Subjt: MAYSRRHDFLFCNLCGTMLSFSSTKYVVCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEE---KMQLSKERRRCEKCGNDEAWFESRQMRSAD
Query: EGQTTFYTCTKCHHQTRE
EGQTT+YTC C H+ E
Subjt: EGQTTFYTCTKCHHQTRE
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| AT4G07950.1 DNA-directed RNA polymerase, subunit M, archaeal | 3.2e-06 | 27.27 | Show/hide |
Query: FCNLCGTMLSF---SSTKYV--VCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
FC CG +L + S+++ CP + E+ +++ ++K + + ++ ++ C +CG+D+A+F+S Q+RSADE ++ FY
Subjt: FCNLCGTMLSF---SSTKYV--VCPLCKSKRSAKEVVGREISYTVTAEEIRKQLGISLIDEEKMQLSKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
Query: CTKCHHQTRE
C KC RE
Subjt: CTKCHHQTRE
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