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Tan0004646 (gene) of Snake gourd v1 genome

Gene IDTan0004646
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:82851901..82852838
RNA-Seq ExpressionTan0004646
SyntenyTan0004646
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584107.1 hypothetical protein SDJN03_20039, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0740.95Show/hide
Query:  LHSPHHHPLTKKKAKDQGKIMDGKKVGFREVGSRSVPVEFDGLMANMEQMVKMLKRVSGLKGLMSDPVMACLVSAQT---VIAAEIISGSTSPPDHQNKG
        + +P H P T+++ +D G   DG K+ + E    S  +    L+ NME++VK LKRV G +GLM DP++ CLVS+QT   +  A +IS +  PP  Q KG
Subjt:  LHSPHHHPLTKKKAKDQGKIMDGKKVGFREVGSRSVPVEFDGLMANMEQMVKMLKRVSGLKGLMSDPVMACLVSAQT---VIAAEIISGSTSPPDHQNKG

Query:  SSTNT
          T+T
Subjt:  SSTNT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGACTACAATGGAGTTATTAACAAAGCACTGCACTCTCCCCATCATCACCCACTCACAAAAAAAAAAGCAAAAGATCAAGGGAAGATCATGGATGGTAAGAAGGT
AGGGTTTCGTGAGGTTGGTTCGAGATCGGTCCCGGTCGAATTTGACGGTTTGATGGCGAACATGGAGCAAATGGTTAAGATGCTGAAAAGGGTCAGCGGCCTGAAGGGTT
TGATGAGTGATCCTGTGATGGCTTGCCTTGTTTCTGCACAGACTGTGATCGCTGCCGAAATCATCTCCGGATCAACATCACCACCAGATCACCAGAATAAAGGTTCTTCT
ACTAACACAGCTGCTATTGATGATGGGCCTGTACTACACAAGAAGATGAAGAAGTCAGAACCACCCGCGTTGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGACTACAATGGAGTTATTAACAAAGCACTGCACTCTCCCCATCATCACCCACTCACAAAAAAAAAAGCAAAAGATCAAGGGAAGATCATGGATGGTAAGAAGGT
AGGGTTTCGTGAGGTTGGTTCGAGATCGGTCCCGGTCGAATTTGACGGTTTGATGGCGAACATGGAGCAAATGGTTAAGATGCTGAAAAGGGTCAGCGGCCTGAAGGGTT
TGATGAGTGATCCTGTGATGGCTTGCCTTGTTTCTGCACAGACTGTGATCGCTGCCGAAATCATCTCCGGATCAACATCACCACCAGATCACCAGAATAAAGGTTCTTCT
ACTAACACAGCTGCTATTGATGATGGGCCTGTACTACACAAGAAGATGAAGAAGTCAGAACCACCCGCGTTGGATTAA
Protein sequenceShow/hide protein sequence
MGDYNGVINKALHSPHHHPLTKKKAKDQGKIMDGKKVGFREVGSRSVPVEFDGLMANMEQMVKMLKRVSGLKGLMSDPVMACLVSAQTVIAAEIISGSTSPPDHQNKGSS
TNTAAIDDGPVLHKKMKKSEPPALD