| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa] | 6.1e-07 | 36.44 | Show/hide |
Query: DWPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSI----------------CICQQ---VLLRGNN
+WPRGNR ++ +VEIEL +PD LP SA SS S STW+ELY +S+ +C + ++RG++
Subjt: DWPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSI----------------CICQQ---VLLRGNN
Query: VCWLHAVSRAKLASGLGG
VCWLHA+ RAK A G GG
Subjt: VCWLHAVSRAKLASGLGG
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| KAA0054351.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.6e-07 | 39.17 | Show/hide |
Query: WPRGNRSSVRAKVL--------------------VEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI------CQQV----------------LLRG
WPRGNR S++ + L VEI+L VPD L SA SS S STW+ELY +S+ + QV ++RG
Subjt: WPRGNRSSVRAKVL--------------------VEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI------CQQV----------------LLRG
Query: NNVCWLHAVSRAKLASGLGG
+NVCWLHAV RA+ A GLGG
Subjt: NNVCWLHAVSRAKLASGLGG
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.7e-07 | 36.76 | Show/hide |
Query: RGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI------CQQV----------------LLRGNN
RGNRSS+++ +VEIEL VPD LP SA SS S STW+ELY +S+ + QV ++RG++
Subjt: RGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI------CQQV----------------LLRGNN
Query: VCWLHAVSRAKLASGL-GGVSSIELAEHGPSKDKSK
VCWLHAV RAK G GGV+++E H P+ D +
Subjt: VCWLHAVSRAKLASGL-GGVSSIELAEHGPSKDKSK
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| TYK25935.1 gag/pol protein [Cucumis melo var. makuwa] | 6.1e-07 | 36.44 | Show/hide |
Query: DWPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSI----------------CICQQ---VLLRGNN
+WPRGNR ++ +VEIEL +PD LP SA SS S STW+ELY +S+ +C + ++RG++
Subjt: DWPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSI----------------CICQQ---VLLRGNN
Query: VCWLHAVSRAKLASGLGG
VCWLHA+ RAK A G GG
Subjt: VCWLHAVSRAKLASGLGG
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 2.7e-07 | 36.76 | Show/hide |
Query: RGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI------CQQV----------------LLRGNN
RGNRSS+++ +VEIEL VPD LP SA SS S STW+ELY +S+ + QV ++RG++
Subjt: RGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI------CQQV----------------LLRGNN
Query: VCWLHAVSRAKLASGL-GGVSSIELAEHGPSKDKSK
VCWLHAV RAK G GGV+++E H P+ D +
Subjt: VCWLHAVSRAKLASGL-GGVSSIELAEHGPSKDKSK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P7 Gag/pol protein | 3.0e-07 | 36.44 | Show/hide |
Query: DWPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSI----------------CICQQ---VLLRGNN
+WPRGNR ++ +VEIEL +PD LP SA SS S STW+ELY +S+ +C + ++RG++
Subjt: DWPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSI----------------CICQQ---VLLRGNN
Query: VCWLHAVSRAKLASGLGG
VCWLHA+ RAK A G GG
Subjt: VCWLHAVSRAKLASGLGG
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| A0A5A7TKT0 Reverse transcriptase | 3.9e-07 | 41.58 | Show/hide |
Query: WPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI---CQQVLLRGNNVCWLHAVSRAKLASGLG
WPRGNR S++ +VEIEL +PD LP SA SS S ST +ELY +S+ + ++RG++VCWLHAV RAK G G
Subjt: WPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI---CQQVLLRGNNVCWLHAVSRAKLASGLG
Query: G
G
Subjt: G
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| A0A5D3CMM1 Reverse transcriptase | 7.8e-08 | 39.17 | Show/hide |
Query: WPRGNRSSVRAKVL--------------------VEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI------CQQV----------------LLRG
WPRGNR S++ + L VEI+L VPD L SA SS S STW+ELY +S+ + QV ++RG
Subjt: WPRGNRSSVRAKVL--------------------VEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI------CQQV----------------LLRG
Query: NNVCWLHAVSRAKLASGLGG
+NVCWLHAV RA+ A GLGG
Subjt: NNVCWLHAVSRAKLASGLGG
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| A0A5D3D150 Reverse transcriptase | 3.9e-07 | 41.58 | Show/hide |
Query: WPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI---CQQVLLRGNNVCWLHAVSRAKLASGLG
WPRGNR S++ +VEIEL +PD LP SA SS S ST +ELY +S+ + ++RG++VCWLHAV RAK G G
Subjt: WPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSICI---CQQVLLRGNNVCWLHAVSRAKLASGLG
Query: G
G
Subjt: G
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| A0A5D3DR18 Gag/pol protein | 3.0e-07 | 36.44 | Show/hide |
Query: DWPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSI----------------CICQQ---VLLRGNN
+WPRGNR ++ +VEIEL +PD LP SA SS S STW+ELY +S+ +C + ++RG++
Subjt: DWPRGNRSSVRA--------------------KVLVEIELRVPDNLPQSAGSSTSLICSTWVELYKKSI----------------CICQQ---VLLRGNN
Query: VCWLHAVSRAKLASGLGG
VCWLHA+ RAK A G GG
Subjt: VCWLHAVSRAKLASGLGG
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