| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022142704.1 DNA-directed RNA polymerases II and IV subunit 5A [Momordica charantia] | 4.0e-102 | 93.2 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLA+EEITRLFRIRKTVLQMLKDRGYFVGDFE+ MSR+QF++KYGESMKRED+VINKAKRNDSSDQIY+FFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCI EISSKFHLEVFQEAEL+VNIKDHVL+PEHQLL+ EEKKTLLERYTVKETQLPRIQVTDP+ARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022143609.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Momordica charantia] | 1.1e-104 | 96.6 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFRIRKTVLQMLKDR YFVGDFE+DMSR+QFKHKYGE+MKREDIVINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022953770.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 1.7e-105 | 96.6 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFRIRKTVLQMLKDRGYFVGDFE+DMSR+QFKHKYGESMKRED+VINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 8.5e-105 | 97.09 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLAEEEITRLFR+RKTVLQMLKDRGYFVGDFEVDMSR+QFK+KYGESMKREDIVINKAKRNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 1.3e-105 | 97.09 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFRIRKTVLQMLKDRGYFVGDFE+DMSR+QFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CPU1 DNA-directed RNA polymerases II and IV subunit 5A-like | 5.4e-105 | 96.6 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFRIRKTVLQMLKDR YFVGDFE+DMSR+QFKHKYGE+MKREDIVINKA+RNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1GQK9 DNA-directed RNA polymerases II and IV subunit 5A-like | 8.3e-106 | 96.6 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFRIRKTVLQMLKDRGYFVGDFE+DMSR+QFKHKYGESMKRED+VINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 4.1e-105 | 97.09 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLAEEEITRLFR+RKTVLQMLKDRGYFVGDFEVDMSR+QFK+KYGESMKREDIVINKAKRNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 6.4e-106 | 97.09 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVL+EEEITRLFRIRKTVLQMLKDRGYFVGDFE+DMSR+QFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMK+ENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEISSKFHLEVFQEAELLVN+KDHVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 4.1e-105 | 97.09 | Show/hide |
Query: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
MVLAEEEITRLFR+RKTVLQMLKDRGYFVGDFEVDMSR+QFK+KYGESMKREDIVINKAKRNDSSDQIY+FFPEE KVGVKTMKTYTNRMKSENVFRAIL
Subjt: MVLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VVQQNLTPFARTCISEIS+KFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 3.4e-56 | 52.91 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DRGY V E+D + ++FK ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH +++ EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 6.6e-92 | 81.46 | Show/hide |
Query: VLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L EEE+ RL+RI+KT++QML+DRGYF+ D E+ M++ QF K+G++MKRED+V KAKRND+SDQ+Y+FFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE+LVNIK+HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 9.9e-56 | 52.43 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DRGY V E+D + ++F+ ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH +++ EE LL RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 3.4e-56 | 52.91 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
EEE RL++IRKT++Q+ DRGY V E+D + ++FK ++G+ +R D+ + A +D +DQ++VFFPEE KVG+KT+K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQQ +TP A+ + +++ K+ LE F + ELL+NI +H LVPEH +++ EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 9.9e-56 | 55.07 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGE-----SMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
E E RL+RIRKTVLQM+ DRGY V E+D + FK +YG+ R D+ I A +D +DQ++VFFPE+ K+G+KT+K +M+ +N+ RAI
Subjt: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGE-----SMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAI
Query: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
+VVQ +TP A+ I +++ K+ LE F EAEL+VNI +H LVPEH +++ EEK LL RY +K++QLPRIQ DPVARY+GL+RGQVVKIIRPSETAGRY
Subjt: LVVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
+TYR VV
Subjt: VTYRYVV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 1.3e-31 | 38.5 | Show/hide |
Query: EITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVVQQN
E + + R+T ++ML+DRGY V D ++++S QF+ YGE + + I+ R DSS +I V F V V M+ + + EN+ ILV+Q +
Subjt: EITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTY-TNRMKSENVFRAILVVQQN
Query: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+T A + S F +E+F+ +LLVN+ HVL P+HQ+L+++EK++LL++++++E QLPR+ DP+ RYYGL+ GQV+K+ E + +VTYR V
Subjt: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 4.7e-93 | 81.46 | Show/hide |
Query: VLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
+L EEE+ RL+RI+KT++QML+DRGYF+ D E+ M++ QF K+G++MKRED+V KAKRND+SDQ+Y+FFP+E KVGVKTMK YTNRMKSENVFRAILV
Subjt: VLAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
VQQNLTPFARTCISEISSKFHLEVFQEAE+LVNIK+HVLVPEHQ+L+ EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYVT
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 6.4e-26 | 33.83 | Show/hide |
Query: EITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
E R + R T +ML+DRGY V + E+ ++ +F+ +GE + E + I R+D +I V F + + VK+++ ++ + + ILV+Q
Subjt: EITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSE-NVFRAILVVQQN
Query: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
+ FA+ ++ + F +E F +LLVNI H+ P+ ++L+ EEK+ LL ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR +
Subjt: LTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV
Query: V
+
Subjt: V
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.1e-30 | 38.24 | Show/hide |
Query: LAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
L+ EE R + R+ LQML+DRGY V D ++++S F+ YGE + + I+ R+DS+ ++ + F V V +++ + + E + ILV
Subjt: LAEEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTMKT-YTNRMKSENVFRAILV
Query: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
+Q ++T A I S F +E+FQ +LLVNI H L P+HQ+L++EEK TLL++++++E QLPRI D + RYYGL++GQVVK+ E +V
Subjt: VQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYV
+R V
Subjt: YRYV
|
|
| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 1.6e-45 | 46.12 | Show/hide |
Query: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESM---KREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
++EITR+F++R+TVLQML+DRGY + + ++++ R++F ++ ++M +E + ++ K + +D+IYVF+PE KVGV + K +M+ + V R I+
Subjt: EEEITRLFRIRKTVLQMLKDRGYFVGDFEVDMSRDQFKHKYGESM---KREDIVINKAKRNDSSDQIYVFFPEEQKVGVKTM-KTYTNRMKSENVFRAIL
Query: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VV +T AR +SE++ +EVF+EAEL+ NI +H LV ++ +L ++ KK LL YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y
Subjt: VVQQNLTPFARTCISEISSKFHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
|
|
