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Tan0004695 (gene) of Snake gourd v1 genome

Gene IDTan0004695
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:26496832..26497367
RNA-Seq ExpressionTan0004695
SyntenyTan0004695
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645820.1 hypothetical protein Csa_017234 [Cucumis sativus]3.1e-2256.31Show/hide
Query:  MSCATIGNNVGQQEEERNDMKKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNFE-DHKQYRFFLEKDDVCPGDEHVYEVIV
        MSC     +V  + E + D KKGYV ITW PI NLE+P VQ++VKF VEE NK YK+HWKLK +QQ WY   +    QYRF LE+D V PGDE +YE IV
Subjt:  MSCATIGNNVGQQEEERNDMKKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNFE-DHKQYRFFLEKDDVCPGDEHVYEVIV

Query:  SAK
        S +
Subjt:  SAK
KAG6571860.1 hypothetical protein SDJN03_28588, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2756.9Show/hide
Query:  NVGQQEEERNDM---KKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNFEDHKQYRFFLEKDDVCPGDEHVYEVIVSAKKYG
        + GQ  +  +DM   KKG+VWITW  I N+E+  VQ+I KFAVEE NKKYK+ WK K IQQ WY   +D  QYRF LE+DDV PGD+ VY+ IVS K  G
Subjt:  NVGQQEEERNDM---KKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNFEDHKQYRFFLEKDDVCPGDEHVYEVIVSAKKYG

Query:  FITIKDLILFMRYFKF
            K+LILFM YFK+
Subjt:  FITIKDLILFMRYFKF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTGCAACGATTGGGAATAATGTTGGTCAACAAGAGGAGGAGAGAAATGATATGAAGAAGGGATACGTATGGATCACATGGATACCAATTTCGAACCTTGAGGA
TCCGTTGGTGCAAGATATTGTAAAATTCGCAGTGGAAGAACAGAATAAGAAATATAAAGAACATTGGAAACTCAAGTGCATTCAACAAGCTTGGTACGTGAACTTTGAAG
ATCACAAACAATATCGTTTCTTTTTAGAGAAAGATGATGTTTGTCCAGGAGATGAGCACGTATATGAGGTCATTGTCTCCGCAAAAAAATATGGTTTTATAACAATCAAG
GATCTCATACTTTTCATGCGATACTTCAAATTCTGA
mRNA sequenceShow/hide mRNA sequence
GTGAAATCATAGGAATGAAAAATTGCAATAATATATACAATGAGTTGTGCAACGATTGGGAATAATGTTGGTCAACAAGAGGAGGAGAGAAATGATATGAAGAAGGGATA
CGTATGGATCACATGGATACCAATTTCGAACCTTGAGGATCCGTTGGTGCAAGATATTGTAAAATTCGCAGTGGAAGAACAGAATAAGAAATATAAAGAACATTGGAAAC
TCAAGTGCATTCAACAAGCTTGGTACGTGAACTTTGAAGATCACAAACAATATCGTTTCTTTTTAGAGAAAGATGATGTTTGTCCAGGAGATGAGCACGTATATGAGGTC
ATTGTCTCCGCAAAAAAATATGGTTTTATAACAATCAAGGATCTCATACTTTTCATGCGATACTTCAAATTCTGATCCCAACTTCCTTCCCTCTTCTATTCTTCTACTAT
ATATCTACTTCACTATATATATATATATATATGGCACTGTACCAACCTTGATTATCAATATCTAAATAATGGAATAATAAATGATACTATTTAAGT
Protein sequenceShow/hide protein sequence
MSCATIGNNVGQQEEERNDMKKGYVWITWIPISNLEDPLVQDIVKFAVEEQNKKYKEHWKLKCIQQAWYVNFEDHKQYRFFLEKDDVCPGDEHVYEVIVSAKKYGFITIK
DLILFMRYFKF